BLASTX nr result

ID: Chrysanthemum22_contig00020026 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00020026
         (1608 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI11021.1| Zinc finger, FYVE/PHD-type [Cynara cardunculus va...    78   2e-11
ref|XP_021974139.1| RNA polymerase-associated protein LEO1-like ...    74   5e-10
gb|OTG36821.1| putative zinc finger, RING/FYVE/PHD-type [Heliant...    74   5e-10
ref|XP_023772501.1| sarcoplasmic reticulum histidine-rich calciu...    69   2e-08

>gb|KVI11021.1| Zinc finger, FYVE/PHD-type [Cynara cardunculus var. scolymus]
          Length = 816

 Score = 78.2 bits (191), Expect = 2e-11
 Identities = 56/157 (35%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
 Frame = -2

Query: 647 MSLGKKANQIKKPSEKDAVSYTGLXXXXXDAVEEDYAEHESSSRKRNQRNKPRENKSIVF 468
           MSL +K++ IKKP EK  +SYT L        EEDY E   S R+RN R K +E K ++ 
Sbjct: 122 MSLDRKSDHIKKPREKKRISYTELDDEE----EEDYEELVPSGRRRNLRKKHQEKKRVLD 177

Query: 467 TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSMYSGRKANRKRKLREKRGVSYMEGD 288
           T                                  M+ GRK ++++KLREKR V Y E D
Sbjct: 178 TEDDEDDDAEF------------------------MHLGRKVSQEKKLREKRKVLYTEDD 213

Query: 287 DEDGFG--------FISTRKKADQIKEPAEENTVSYK 201
           DED           F+ T +K +  KE  E+ TVSYK
Sbjct: 214 DEDADADEDEDDSEFMCTSRKGNLTKETREKRTVSYK 250


>ref|XP_021974139.1| RNA polymerase-associated protein LEO1-like [Helianthus annuus]
 ref|XP_021974147.1| RNA polymerase-associated protein LEO1-like [Helianthus annuus]
          Length = 916

 Score = 73.9 bits (180), Expect = 5e-10
 Identities = 67/209 (32%), Positives = 87/209 (41%), Gaps = 15/209 (7%)
 Frame = -2

Query: 644 SLGKKANQIKKPSEKDAVSYTGLXXXXXDAVEED-----YAEHESSSRKRNQRNKPRENK 480
           S  +KANQIK P+     SYT       D  EED     YAE  S  RKRNQR KP+E K
Sbjct: 285 SFDRKANQIKTPTAIWRDSYTEKDDDEEDDEEEDEDEEYYAEFASLGRKRNQRKKPQEKK 344

Query: 479 SIVFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSMYSGRKANRKRKLREKRGVSY 300
            +V+T                                  MYSGRK N+K+ L  K  VSY
Sbjct: 345 -VVYTEDDEDDANDEEY----------------------MYSGRKVNQKKNLWGKSEVSY 381

Query: 299 ME----------GDDEDGFGFISTRKKADQIKEPAEENTVSYKXXXXXXXXXXXXXEFKL 150
            E           DD+D  G +S  +K +QI +  E+  VSYK             EFKL
Sbjct: 382 TEEEEEDDDDDDDDDDDDLGVVSASRKRNQISKRREKRIVSYK-EDNQEEEEESDAEFKL 440

Query: 149 XXXXXXXXXXXSPKIQKSDNQIKEPREEN 63
                      +PK++K+      P+++N
Sbjct: 441 SESDFVDDEDETPKMKKNKGLRSHPQKKN 469


>gb|OTG36821.1| putative zinc finger, RING/FYVE/PHD-type [Helianthus annuus]
          Length = 938

 Score = 73.9 bits (180), Expect = 5e-10
 Identities = 67/209 (32%), Positives = 87/209 (41%), Gaps = 15/209 (7%)
 Frame = -2

Query: 644 SLGKKANQIKKPSEKDAVSYTGLXXXXXDAVEED-----YAEHESSSRKRNQRNKPRENK 480
           S  +KANQIK P+     SYT       D  EED     YAE  S  RKRNQR KP+E K
Sbjct: 307 SFDRKANQIKTPTAIWRDSYTEKDDDEEDDEEEDEDEEYYAEFASLGRKRNQRKKPQEKK 366

Query: 479 SIVFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSMYSGRKANRKRKLREKRGVSY 300
            +V+T                                  MYSGRK N+K+ L  K  VSY
Sbjct: 367 -VVYTEDDEDDANDEEY----------------------MYSGRKVNQKKNLWGKSEVSY 403

Query: 299 ME----------GDDEDGFGFISTRKKADQIKEPAEENTVSYKXXXXXXXXXXXXXEFKL 150
            E           DD+D  G +S  +K +QI +  E+  VSYK             EFKL
Sbjct: 404 TEEEEEDDDDDDDDDDDDLGVVSASRKRNQISKRREKRIVSYK-EDNQEEEEESDAEFKL 462

Query: 149 XXXXXXXXXXXSPKIQKSDNQIKEPREEN 63
                      +PK++K+      P+++N
Sbjct: 463 SESDFVDDEDETPKMKKNKGLRSHPQKKN 491


>ref|XP_023772501.1| sarcoplasmic reticulum histidine-rich calcium-binding protein-like
           [Lactuca sativa]
 ref|XP_023772507.1| sarcoplasmic reticulum histidine-rich calcium-binding protein-like
           [Lactuca sativa]
 ref|XP_023772512.1| sarcoplasmic reticulum histidine-rich calcium-binding protein-like
           [Lactuca sativa]
          Length = 1125

 Score = 68.9 bits (167), Expect = 2e-08
 Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
 Frame = -2

Query: 647 MSLGKKANQIKKPSEKDAVSYTGLXXXXXDAVEED-YAEHESSSRKRNQRNKPRENKSIV 471
           MS G+++++IKKP EK   SYT       +  ++D YAE  S  RKRNQR KP+E K + 
Sbjct: 203 MSSGRESSRIKKPVEKKRFSYTKDDDDEEEEEDDDDYAEFVSLGRKRNQRQKPKEKKRVS 262

Query: 470 FTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSMYSGRKANRKRKLREKRGVSYMEG 291
           +T                                  M SG++    +K REK+ VSY E 
Sbjct: 263 YTEEDEDDDDAEF-----------------------MSSGKEGKHVKKPREKKKVSYTEE 299

Query: 290 DD--EDGFGFISTRKKADQIKEPAEENTVSYK 201
           DD  ED   F+S+ +K  Q K+  EE  V ++
Sbjct: 300 DDDVEDYLEFMSSGRKRSQRKKCHEEKRVEHE 331



 Score = 67.0 bits (162), Expect = 8e-08
 Identities = 57/176 (32%), Positives = 75/176 (42%), Gaps = 28/176 (15%)
 Frame = -2

Query: 647 MSLGKKANQIKKPSEKDAVSYTGLXXXXXDAV--------------------EEDYAEHE 528
           MSLGKKA +IKKP EK  VSYT +                            +ED+ E  
Sbjct: 112 MSLGKKAKRIKKPREKKRVSYTEVDDDEEFMSLGREAKRREKKRVSYTEDDDDEDFGEFM 171

Query: 527 SSSRKRNQRNKPRENKSIVFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSMYSGR 348
            SS  RNQRNKPRE K + +T                                G M SGR
Sbjct: 172 FSS--RNQRNKPREKKRVSYT----------------------EEEEEDDDDAGFMSSGR 207

Query: 347 KANRKRKLREKRGVSYM--------EGDDEDGFGFISTRKKADQIKEPAEENTVSY 204
           +++R +K  EK+  SY         E DD+D   F+S  +K +Q ++P E+  VSY
Sbjct: 208 ESSRIKKPVEKKRFSYTKDDDDEEEEEDDDDYAEFVSLGRKRNQRQKPKEKKRVSY 263


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