BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00019957
         (680 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTF90821.1| putative RNA-dependent RNA polymerase, eukaryotic...    66   4e-09
ref|XP_022017929.1| probable RNA-dependent RNA polymerase 5 isof...    66   7e-09
gb|KVI01425.1| Pentatricopeptide repeat-containing protein [Cyna...    66   9e-09
gb|KVH93864.1| RNA-dependent RNA polymerase, eukaryotic-type, pa...    66   9e-09
ref|XP_022017928.1| probable RNA-dependent RNA polymerase 3 isof...    65   1e-08
ref|XP_022017927.1| probable RNA-dependent RNA polymerase 3 isof...    65   1e-08
gb|KVG23917.1| RNA-dependent RNA polymerase, eukaryotic-type, pa...    64   2e-08
ref|XP_021973863.1| pentatricopeptide repeat-containing protein ...    64   4e-08
gb|PLY69096.1| hypothetical protein LSAT_5X144600 [Lactuca sativa]     61   5e-07
ref|XP_023739924.1| probable RNA-dependent RNA polymerase 5 isof...    61   5e-07

>gb|OTF90821.1| putative RNA-dependent RNA polymerase, eukaryotic-type [Helianthus
           annuus]
          Length = 346

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +2

Query: 56  EAWKLPCFNVEIPAATMNLWKDRYKSYKFEMVDAIQSGDET 178
           E WKL CFNVEIP   +NLWK+RY SYK+EM  A+QSGDE+
Sbjct: 286 EIWKLQCFNVEIPDRVLNLWKNRYDSYKYEMSTALQSGDES 326


>ref|XP_022017929.1| probable RNA-dependent RNA polymerase 5 isoform X1 [Helianthus
            annuus]
          Length = 1116

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +2

Query: 56   EAWKLPCFNVEIPAATMNLWKDRYKSYKFEMVDAIQSGDET 178
            E WKL CFNVEIP   +NLWK+RY SYK+EM  A+QSGDE+
Sbjct: 985  EIWKLQCFNVEIPDRVLNLWKNRYDSYKYEMSTALQSGDES 1025


>gb|KVI01425.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 850

 Score = 65.9 bits (159), Expect = 9e-09
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = -1

Query: 680 KKYQDALEFVGNIRKNDSSFDEQNLQTLASLARAFVVL 567
           KKYQ+ALEFVGNIRK+D SFDEQ+LQTLASLARA VVL
Sbjct: 813 KKYQEALEFVGNIRKSDGSFDEQSLQTLASLARANVVL 850


>gb|KVH93864.1| RNA-dependent RNA polymerase, eukaryotic-type, partial [Cynara
           cardunculus var. scolymus]
          Length = 1002

 Score = 65.9 bits (159), Expect = 9e-09
 Identities = 27/41 (65%), Positives = 35/41 (85%)
 Frame = +2

Query: 56  EAWKLPCFNVEIPAATMNLWKDRYKSYKFEMVDAIQSGDET 178
           + WKLPCFNVEIP A++NLWK+RY SYK EM +A+ +GDE+
Sbjct: 873 DIWKLPCFNVEIPEASLNLWKNRYVSYKQEMCNAMNAGDES 913


>ref|XP_022017928.1| probable RNA-dependent RNA polymerase 3 isoform X2 [Helianthus
            annuus]
          Length = 1261

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 27/41 (65%), Positives = 34/41 (82%)
 Frame = +2

Query: 56   EAWKLPCFNVEIPAATMNLWKDRYKSYKFEMVDAIQSGDET 178
            E WKLPCFNVEIP + ++LWK+RY SY+ EM  A+QSGDE+
Sbjct: 1130 EIWKLPCFNVEIPDSILSLWKNRYDSYRHEMSSALQSGDES 1170


>ref|XP_022017927.1| probable RNA-dependent RNA polymerase 3 isoform X1 [Helianthus
            annuus]
 gb|OTF90819.1| putative RNA-dependent RNA polymerase, eukaryotic-type [Helianthus
            annuus]
          Length = 1336

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 27/41 (65%), Positives = 34/41 (82%)
 Frame = +2

Query: 56   EAWKLPCFNVEIPAATMNLWKDRYKSYKFEMVDAIQSGDET 178
            E WKLPCFNVEIP + ++LWK+RY SY+ EM  A+QSGDE+
Sbjct: 1205 EIWKLPCFNVEIPDSILSLWKNRYDSYRHEMSSALQSGDES 1245


>gb|KVG23917.1| RNA-dependent RNA polymerase, eukaryotic-type, partial [Cynara
           cardunculus var. scolymus]
          Length = 365

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 26/41 (63%), Positives = 34/41 (82%)
 Frame = +2

Query: 56  EAWKLPCFNVEIPAATMNLWKDRYKSYKFEMVDAIQSGDET 178
           + WKLPCFNVEIP A++NLW +RY SYK EM +A+ +GDE+
Sbjct: 239 DIWKLPCFNVEIPEASLNLWNNRYMSYKQEMCNAMNAGDES 279


>ref|XP_021973863.1| pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic [Helianthus annuus]
 ref|XP_021973864.1| pentatricopeptide repeat-containing protein At2g18940,
           chloroplastic [Helianthus annuus]
 gb|OTG21256.1| putative tetratricopeptide repeat (TPR)-like superfamily protein
           [Helianthus annuus]
          Length = 888

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = -1

Query: 680 KKYQDALEFVGNIRKNDSSFDEQNLQTLASLARAFVVL 567
           KKYQ+ALEFVGNIRK DSSFDEQNL+TLAS AR+ VVL
Sbjct: 851 KKYQEALEFVGNIRKTDSSFDEQNLRTLASHARSSVVL 888


>gb|PLY69096.1| hypothetical protein LSAT_5X144600 [Lactuca sativa]
          Length = 1149

 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = +2

Query: 56   EAWKLPCFNVEIPAATMNLWKDRYKSYKFEMVDAIQSGDET 178
            + WKLPCFNVEIP   ++LWK  Y SY+ EM DA+ SGDE+
Sbjct: 1018 DIWKLPCFNVEIPEGCLDLWKKWYSSYRHEMSDAMNSGDES 1058


>ref|XP_023739924.1| probable RNA-dependent RNA polymerase 5 isoform X1 [Lactuca sativa]
          Length = 1155

 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = +2

Query: 56   EAWKLPCFNVEIPAATMNLWKDRYKSYKFEMVDAIQSGDET 178
            + WKLPCFNVEIP   ++LWK  Y SY+ EM DA+ SGDE+
Sbjct: 1024 DIWKLPCFNVEIPEGCLDLWKKWYSSYRHEMSDAMNSGDES 1064