BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00019892
         (547 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI07429.1| Actin-binding FH2 [Cynara cardunculus var. scolymus]   100   3e-21
ref|XP_021992348.1| pentatricopeptide repeat-containing protein ...    96   9e-20
ref|XP_021990799.1| pentatricopeptide repeat-containing protein ...    88   8e-17
ref|XP_023753329.1| pentatricopeptide repeat-containing protein ...    62   7e-08
ref|XP_023753327.1| pentatricopeptide repeat-containing protein ...    62   7e-08

>gb|KVI07429.1| Actin-binding FH2 [Cynara cardunculus var. scolymus]
          Length = 874

 Score =  100 bits (249), Expect = 3e-21
 Identities = 56/105 (53%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
 Frame = +3

Query: 243 MDNFSFASSTTHYCSTFSGKPYSVSATTLPYHPITTACSHDSD--XXXXXXXXXXXXXXX 416
           MDNFS ASST HYCSTFSGKPYS+SATTLP++ ITT C HDS+                 
Sbjct: 1   MDNFSLASSTPHYCSTFSGKPYSISATTLPFYSITTCC-HDSENPSTTSSSSSIRRPTNN 59

Query: 417 KPFKPITNSXXXXXXXXXXXXXXXXLQTILN--PKRHPVDNKSQT 545
           KPFKPI NS                LQT+LN  PKR+P+DN SQT
Sbjct: 60  KPFKPIANSPINPHPPKPKTHITNPLQTLLNPTPKRNPIDNNSQT 104


>ref|XP_021992348.1| pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Helianthus annuus]
 gb|OTG06630.1| putative tetratricopeptide-like helical domain, Nucleotide-binding
           alpha-beta plait domain protein [Helianthus annuus]
          Length = 943

 Score = 96.3 bits (238), Expect = 9e-20
 Identities = 53/106 (50%), Positives = 63/106 (59%), Gaps = 5/106 (4%)
 Frame = +3

Query: 243 MDNFSFASSTTHYCSTFSGKPYSVS---ATTLPYHPITTACSHDSDXXXXXXXXXXXXXX 413
           MDNFS ASSTTHYCSTF+ KPYS+S    TT+P++ ITT CSHDS+              
Sbjct: 1   MDNFSLASSTTHYCSTFTSKPYSMSTRTVTTIPFYSITT-CSHDSENLTTTSSSLRRPTN 59

Query: 414 XKPFKPITNSXXXXXXXXXXXXXXXXLQTILN--PKRHPVDNKSQT 545
            +PFKPI NS                LQT+LN  PKR+P+DN SQT
Sbjct: 60  NRPFKPIANSPVNPHRPQPKTHNTNPLQTLLNPTPKRNPIDNSSQT 105


>ref|XP_021990799.1| pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Helianthus annuus]
          Length = 1032

 Score = 87.8 bits (216), Expect = 8e-17
 Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
 Frame = +3

Query: 249 NFSFASSTTHYCSTFSGKPYSVS---ATTLPYHPITTACSHDSDXXXXXXXXXXXXXXXK 419
           N+  ASSTTHYCSTF+ KPY  S   ATT+P++ ITT CSHDS+               +
Sbjct: 96  NYVIASSTTHYCSTFTSKPYPTSTRTATTIPFYSITT-CSHDSENLTTTSSSLRRPANNR 154

Query: 420 PFKPITNSXXXXXXXXXXXXXXXXLQTILN--PKRHPVDNKSQT 545
           PFKPI NS                LQT+LN  PKR+P+DN SQT
Sbjct: 155 PFKPIANSPVNPHRPKPKTHNTNPLQTLLNPTPKRNPIDNSSQT 198


>ref|XP_023753329.1| pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic isoform X2 [Lactuca sativa]
          Length = 790

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 31/43 (72%), Positives = 38/43 (88%)
 Frame = +3

Query: 243 MDNFSFASSTTHYCSTFSGKPYSVSATTLPYHPITTACSHDSD 371
           M+NFS ASSTT+ CSTFSGKPYS+S +TLP++ I TACSHDS+
Sbjct: 1   MNNFSLASSTTYCCSTFSGKPYSLS-STLPFYSI-TACSHDSE 41


>ref|XP_023753327.1| pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic isoform X1 [Lactuca sativa]
 ref|XP_023753328.1| pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic isoform X1 [Lactuca sativa]
          Length = 953

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 31/43 (72%), Positives = 38/43 (88%)
 Frame = +3

Query: 243 MDNFSFASSTTHYCSTFSGKPYSVSATTLPYHPITTACSHDSD 371
           M+NFS ASSTT+ CSTFSGKPYS+S +TLP++ I TACSHDS+
Sbjct: 1   MNNFSLASSTTYCCSTFSGKPYSLS-STLPFYSI-TACSHDSE 41