BLASTX nr result

ID: Chrysanthemum22_contig00019538 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00019538
         (399 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022036237.1| CRM-domain containing factor CFM3, chloropla...   105   1e-23
gb|OTG29805.1| putative CRS1 / YhbY (CRM) domain-containing prot...   104   2e-23

>ref|XP_022036237.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
           [Helianthus annuus]
          Length = 941

 Score =  105 bits (262), Expect = 1e-23
 Identities = 61/133 (45%), Positives = 80/133 (60%), Gaps = 6/133 (4%)
 Frame = -2

Query: 383 SVKVAPWVKKSEAQKKSLDFDNGYFQKDSERGEFD------TEXXXXXXXXXXXXVRFAP 222
           SV +APWVKK++ QK+S DF++G  QKDSE G+ D      +             V+ AP
Sbjct: 231 SVNLAPWVKKTKPQKESFDFEDGNSQKDSENGKIDGGYVSNSFVGDSVSFESKKSVKLAP 290

Query: 221 WVKKSEAQKKSFDFDNGNLQKDSFRGENEGEFVNXXXXXXXXXXXXXXXXXXXVPWERGK 42
           WV+KS+ QK+SFDF++GNL+KDS + E + E V+                   VPWER K
Sbjct: 291 WVQKSKPQKQSFDFEDGNLEKDSEKDEIDDEHVS--------NNGQESQRSERVPWEREK 342

Query: 41  DLFQSSSNTPLAE 3
           DLFQS+SNTPLAE
Sbjct: 343 DLFQSNSNTPLAE 355



 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 43/94 (45%), Positives = 60/94 (63%), Gaps = 6/94 (6%)
 Frame = -2

Query: 383 SVKVAPWVKKSEAQKKSLDFDNGYFQKDSERGEFD------TEXXXXXXXXXXXXVRFAP 222
           SV +APWVKK++ QK+S DF++G  QKDSE G+ D      +             V  AP
Sbjct: 177 SVNLAPWVKKTKPQKESFDFEDGNSQKDSENGKIDGGYVSNSFVGDSVSLDSIKSVNLAP 236

Query: 221 WVKKSEAQKKSFDFDNGNLQKDSFRGENEGEFVN 120
           WVKK++ QK+SFDF++GN QKDS  G+ +G +V+
Sbjct: 237 WVKKTKPQKESFDFEDGNSQKDSENGKIDGGYVS 270



 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
 Frame = -2

Query: 383 SVKVAPWVKKSEAQKKSLDFDNGYFQKDSERGEFD------TEXXXXXXXXXXXXVRFAP 222
           SV  APWVKK++ QK+S DF++G  QKDSE G+ D      +             V  AP
Sbjct: 123 SVNTAPWVKKTKPQKESFDFEDGNSQKDSENGKIDGGYVGNSFVGDSVSFDSIKSVNLAP 182

Query: 221 WVKKSEAQKKSFDFDNGNLQKDSFRGENEGEFVN 120
           WVKK++ QK+SFDF++GN QKDS  G+ +G +V+
Sbjct: 183 WVKKTKPQKESFDFEDGNSQKDSENGKIDGGYVS 216


>gb|OTG29805.1| putative CRS1 / YhbY (CRM) domain-containing protein [Helianthus
           annuus]
          Length = 840

 Score =  104 bits (260), Expect = 2e-23
 Identities = 60/136 (44%), Positives = 80/136 (58%), Gaps = 6/136 (4%)
 Frame = -2

Query: 392 VSDSVKVAPWVKKSEAQKKSLDFDNGYFQKDSERGEFD------TEXXXXXXXXXXXXVR 231
           +   V +APWVKK++ QK+S DF++G  QKDSE G+ D      +             V+
Sbjct: 127 IDGGVNLAPWVKKTKPQKESFDFEDGNSQKDSENGKIDGGYVSNSFVGDSVSFESKKSVK 186

Query: 230 FAPWVKKSEAQKKSFDFDNGNLQKDSFRGENEGEFVNXXXXXXXXXXXXXXXXXXXVPWE 51
            APWV+KS+ QK+SFDF++GNL+KDS + E + E V+                   VPWE
Sbjct: 187 LAPWVQKSKPQKQSFDFEDGNLEKDSEKDEIDDEHVS--------NNGQESQRSERVPWE 238

Query: 50  RGKDLFQSSSNTPLAE 3
           R KDLFQS+SNTPLAE
Sbjct: 239 REKDLFQSNSNTPLAE 254


Top