BLASTX nr result

ID: Chrysanthemum22_contig00019218 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00019218
         (521 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY71883.1| hypothetical protein LSAT_4X186440 [Lactuca sativa]    105   4e-26

>gb|PLY71883.1| hypothetical protein LSAT_4X186440 [Lactuca sativa]
          Length = 134

 Score =  105 bits (263), Expect = 4e-26
 Identities = 55/119 (46%), Positives = 70/119 (58%), Gaps = 3/119 (2%)
 Frame = +2

Query: 92  MSPSRYSTIAEYCMLILFTI---VVIMSSINPHNGGGSIGLAMXXXXXXXXXXXXXXXXI 262
           M+  R ST+ +Y +L+L TI   V+I SS N       + +A                 +
Sbjct: 1   MALHRASTLLQYYVLMLLTIMSTVIIYSSKNSCGNDRMLAMAQQQQPTTENE-------V 53

Query: 263 XXXXXXXQRAQLIMQCFTGCSQEIVGCGITCTLGSSQSIQPCITDCGLSTFVCMQGCIQ 439
                  +RAQ +MQCFTGC QEI+GCG+TCTLGSSQSI+PC  DCGLSTFVCM  C+Q
Sbjct: 54  GDVIGTGERAQQVMQCFTGCGQEIIGCGVTCTLGSSQSIEPCFVDCGLSTFVCMNSCVQ 112


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