BLASTX nr result

ID: Chrysanthemum22_contig00018828 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00018828
         (605 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH99286.1| Actin-binding FH2 [Cynara cardunculus var. scolymus]   142   1e-35
ref|XP_021977983.1| uncharacterized protein LOC110873375 [Helian...   120   5e-28
ref|XP_023736937.1| splicing factor, suppressor of white-apricot...   102   9e-22

>gb|KVH99286.1| Actin-binding FH2 [Cynara cardunculus var. scolymus]
          Length = 1570

 Score =  142 bits (359), Expect = 1e-35
 Identities = 96/218 (44%), Positives = 128/218 (58%), Gaps = 17/218 (7%)
 Frame = +1

Query: 1    ENACDTEHISHKDATDGNALCSEPAGVIEQGANLSQDD----KSSKKDGVADSERSTTDS 168
            E+ACD  HI+ KDATDGN  C   +GVIEQGANLSQDD    KSS K GV+DSE    DS
Sbjct: 532  EHACDLAHITPKDATDGNLSCPGSSGVIEQGANLSQDDMQFEKSSMKVGVSDSE-WPLDS 590

Query: 169  KIEKINISLHQEMNQSNSSAVAK-------------DNPFKLIQGYASDDGSESDNDPHF 309
            K E+ NI+L+QEMNQS +S  A+              +PF+LIQGYASDD SE+D++PH 
Sbjct: 591  KAEQHNITLYQEMNQSGASDAAEVRSSEVPGDLIRGTSPFRLIQGYASDDSSENDSEPHL 650

Query: 310  ENLSPEAVSRQVKAESDNDLHFENISPQPGSPLFKENDIETKNSPELNTGRGPLSGPVTE 489
            ENLSP AV  Q+K  +      + +             IE+K+  E++ G   L G    
Sbjct: 651  ENLSPGAV--QIKEGTTGLDALQTV-------------IESKDPSEIDKGLRSLEG---- 691

Query: 490  ASLDISSKILEPSTHTENLENRIDGGTSVKQTERREGD 603
             SL+ + +  EPST TE+LE +  G   V++   ++G+
Sbjct: 692  -SLNTAFEFPEPSTRTEDLEGK-TGSYIVREQVEQDGN 727


>ref|XP_021977983.1| uncharacterized protein LOC110873375 [Helianthus annuus]
 ref|XP_021977984.1| uncharacterized protein LOC110873375 [Helianthus annuus]
 ref|XP_021977985.1| uncharacterized protein LOC110873375 [Helianthus annuus]
 gb|OTG19109.1| putative SWAP/Surp, Zinc finger, CCCH-type [Helianthus annuus]
          Length = 987

 Score =  120 bits (302), Expect = 5e-28
 Identities = 86/194 (44%), Positives = 106/194 (54%), Gaps = 5/194 (2%)
 Frame = +1

Query: 37  DATDGNALCSEPAGVIEQGANLSQDD----KSSKKDGVADSERSTTDSKIEKINISLHQE 204
           D    N  C  P   IE G +LS +D    K++K D VADSE S+ D K E+ N++L+QE
Sbjct: 293 DTKAENIACESPRA-IEPGLDLSLNDTQLEKTTKVD-VADSE-SSLDCKTEQNNVNLYQE 349

Query: 205 MNQSNSSAVAKDNPFKLIQGYASDDGSESDNDPHFENLSPEAVSRQVKAESDNDLHFENI 384
           MNQS  S      PF+LIQGYASDD SE+DNDPHFEN+SP AV+ Q              
Sbjct: 350 MNQSEQS------PFRLIQGYASDDNSENDNDPHFENVSPVAVTPQ-------------- 389

Query: 385 SPQPGSPLFKENDIETKNSPELNTGRGPLSGPVTEASLDISSKILEPSTHTENLENRIDG 564
                     EN+            R  LS PV E SLDI+SK+ EPS   E LENR DG
Sbjct: 390 ----------ENE------------RTTLSAPVVEGSLDIASKVSEPSMEPEKLENRTDG 427

Query: 565 GTS-VKQTERREGD 603
           GT+  K +  ++GD
Sbjct: 428 GTTGPKNSGAQKGD 441


>ref|XP_023736937.1| splicing factor, suppressor of white-apricot homolog [Lactuca
           sativa]
 ref|XP_023736938.1| splicing factor, suppressor of white-apricot homolog [Lactuca
           sativa]
 ref|XP_023736939.1| splicing factor, suppressor of white-apricot homolog [Lactuca
           sativa]
 gb|PLY71393.1| hypothetical protein LSAT_5X23020 [Lactuca sativa]
          Length = 831

 Score =  102 bits (255), Expect = 9e-22
 Identities = 69/196 (35%), Positives = 94/196 (47%)
 Frame = +1

Query: 1   ENACDTEHISHKDATDGNALCSEPAGVIEQGANLSQDDKSSKKDGVADSERSTTDSKIEK 180
           E+AC+++ ISHKDATDG+   SE +GV + G                             
Sbjct: 267 EHACNSQQISHKDATDGHIFISESSGVNQSG----------------------------- 297

Query: 181 INISLHQEMNQSNSSAVAKDNPFKLIQGYASDDGSESDNDPHFENLSPEAVSRQVKAESD 360
                           +   NP +LIQGYASDD SE+D+  HFEN+SP  +S   K ++ 
Sbjct: 298 --------------ELIEGTNPIRLIQGYASDDSSENDDGLHFENVSPVTLSPHSKEDTT 343

Query: 361 NDLHFENISPQPGSPLFKENDIETKNSPELNTGRGPLSGPVTEASLDISSKILEPSTHTE 540
             LH              + DIE+KNS +  +G   LS P+ EASL+ SSKI EPS+ TE
Sbjct: 344 TVLH------------ASQTDIESKNSSDPKSGL--LSAPLVEASLNTSSKIPEPSSTTE 389

Query: 541 NLENRIDGGTSVKQTE 588
           +LE + D    +K  E
Sbjct: 390 DLEKQDDSNAKLKVDE 405


Top