BLASTX nr result

ID: Chrysanthemum22_contig00018687 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00018687
         (359 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023754934.1| protein NTM1-like 9 [Lactuca sativa] >gi|132...    72   4e-12
gb|PLY68658.1| hypothetical protein LSAT_5X68261 [Lactuca sativa]      50   9e-06

>ref|XP_023754934.1| protein NTM1-like 9 [Lactuca sativa]
 gb|PLY92144.1| hypothetical protein LSAT_8X3961 [Lactuca sativa]
          Length = 596

 Score = 71.6 bits (174), Expect = 4e-12
 Identities = 50/134 (37%), Positives = 73/134 (54%), Gaps = 37/134 (27%)
 Frame = +2

Query: 14  IEQSSKAIDKDDNSEGKIIIRTRQLPELPP--LPYQGTASRRFRMQTKLH---------- 157
           +E+   A D +++S   I+IRTR+ P +P   +P+QGTASRR R+Q KL           
Sbjct: 458 MEEDHVAYDDENSSGTGIVIRTRENP-IPSSSIPFQGTASRRIRLQKKLQLGFIRKPMKL 516

Query: 158 ------------------DPNGETVDQDS--SMVQARKQSWFSRAKTVLTSVPA-----V 262
                               + ++VDQDS  +++QA++ S++S+AKT L S+P      V
Sbjct: 517 DTSEEESSVTEAKEPAEISTDEKSVDQDSGSNVIQAKESSFYSKAKTSLASIPVLYMPKV 576

Query: 263 LAVTGLCAGVVALW 304
           L V GLCAG VALW
Sbjct: 577 LVVMGLCAGGVALW 590


>gb|PLY68658.1| hypothetical protein LSAT_5X68261 [Lactuca sativa]
          Length = 83

 Score = 50.4 bits (119), Expect = 9e-06
 Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 7/52 (13%)
 Frame = +2

Query: 170 ETVDQDS--SMVQARKQSWFSRAKTVLTSVPA-----VLAVTGLCAGVVALW 304
           ++VDQDS  +++QA++ S++S+AKT L S+P      VL V GLCAG VALW
Sbjct: 26  KSVDQDSGSNVIQAKESSFYSKAKTSLASIPVLYMPKVLVVMGLCAGGVALW 77


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