BLASTX nr result

ID: Chrysanthemum22_contig00018501 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00018501
         (761 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023732997.1| transcription factor TCP2-like [Lactuca sati...    74   3e-11
gb|KVH89396.1| CYC/TB1, R domain-containing protein [Cynara card...    66   9e-09
gb|KVH97387.1| CYC/TB1, R domain-containing protein [Cynara card...    60   1e-06

>ref|XP_023732997.1| transcription factor TCP2-like [Lactuca sativa]
 ref|XP_023732998.1| transcription factor TCP2-like [Lactuca sativa]
 gb|PLY74505.1| hypothetical protein LSAT_7X27781 [Lactuca sativa]
          Length = 454

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 76/248 (30%), Positives = 87/248 (35%), Gaps = 73/248 (29%)
 Frame = +3

Query: 75  KGSGLSLSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--------SQPSSFADLLAGV 230
           KGSGLSLSRS                            S        +  SSF DLL G 
Sbjct: 210 KGSGLSLSRSENRVRARERAREMAAKKEKEKDTDPVRASVVTQVNGIAHNSSFTDLLTGG 269

Query: 231 TGVSHTSDLNPGVSTDSRMHWTTSPMDYF--------------QPFNVTANDSHSQHHHE 368
              S+T   NP  + +SRM WTT PMDYF                FN+ A D+H Q HH 
Sbjct: 270 IN-SNTVSPNPAATPESRMQWTT-PMDYFFNRPPQSSPQIIQMPQFNIAAVDNHPQQHH- 326

Query: 369 FSFLQENY----------------------PTXXXXXXXXXXXNRGT----------XXX 452
           FSFLQEN+                                   NRGT             
Sbjct: 327 FSFLQENFAPVVTTSGGDGGGESYNLNFSIAASSSGGGIAPGFNRGTLQSNLLSILPHHH 386

Query: 453 XXXXXXXXXXXXXXXXXTNYPFFVS------------SDGYDSQCLQLYGGA-------D 575
                            TN+PFF++            + GYDSQ  QLYGGA       D
Sbjct: 387 HHFQRFQSPSMVDGSTSTNFPFFIAPTIGSGAPEHFPATGYDSQRRQLYGGADGGARHSD 446

Query: 576 HHKEKPKN 599
           HHKEK KN
Sbjct: 447 HHKEKSKN 454


>gb|KVH89396.1| CYC/TB1, R domain-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 456

 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 50/127 (39%), Positives = 58/127 (45%), Gaps = 21/127 (16%)
 Frame = +3

Query: 75  KGSGLSLSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---SQPSSFADLLAGVTG--- 236
           KGSGLSLSRS                                SQ SSF DLL G      
Sbjct: 210 KGSGLSLSRSENRIKARERAREMAAKKEKEKESDIPTRVNGISQNSSFTDLLTGGISSAT 269

Query: 237 VSHTSDLNPGVSTDSRMHWTTSPMDYF---------------QPFNVTANDSHSQHHHEF 371
           VS  ++ NP  S +SR+HWTT PMDYF                 FN+TA ++H QHH  F
Sbjct: 270 VSPNNNSNPAASPESRIHWTT-PMDYFFSRPPPSSSPQIIQMPQFNITAGENHPQHH--F 326

Query: 372 SFLQENY 392
           SFLQEN+
Sbjct: 327 SFLQENF 333


>gb|KVH97387.1| CYC/TB1, R domain-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 464

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 17/84 (20%)
 Frame = +3

Query: 192 SQPSSFADLLAGVTGVSHTSDLNPGVSTDSRMHWTTSPMDYF--------------QPFN 329
           S+ SSF DLL G    +     NP  S +SR HWTT PMDYF                FN
Sbjct: 261 SENSSFTDLLTGGINSTTVRRQNPTASPESRAHWTT-PMDYFFSRPPPPSSQLIQMPQFN 319

Query: 330 VTANDSHSQHH---HEFSFLQENY 392
           +TA D+H  H+   H FSFLQ+++
Sbjct: 320 ITAGDNHHHHNNQQHHFSFLQDSF 343


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