BLASTX nr result

ID: Chrysanthemum22_contig00018239 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00018239
         (476 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010091342.1| oxysterol-binding protein-related protein 1C...    41   7e-06
ref|XP_024018139.1| oxysterol-binding protein-related protein 1C...    41   7e-06

>ref|XP_010091342.1| oxysterol-binding protein-related protein 1C isoform X1 [Morus
           notabilis]
 gb|EXB44332.1| Oxysterol-binding protein-related protein 1C [Morus notabilis]
          Length = 839

 Score = 41.2 bits (95), Expect(2) = 7e-06
 Identities = 19/36 (52%), Positives = 25/36 (69%)
 Frame = +2

Query: 293 KEKLPPIDSRLRPDQRCLENDE*QSLEKQQTFFDQK 400
           KEKLPP DSRLRPDQR LE+ E +    ++   +Q+
Sbjct: 746 KEKLPPTDSRLRPDQRYLESGEYEMANSEKLRLEQR 781



 Score = 36.2 bits (82), Expect(2) = 7e-06
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = +3

Query: 231 FKSTSDSHLLWRKSKPIKVSTR 296
           F+S S+SHLLW++SKP K STR
Sbjct: 707 FESLSESHLLWKRSKPPKFSTR 728


>ref|XP_024018139.1| oxysterol-binding protein-related protein 1C isoform X2 [Morus
           notabilis]
          Length = 518

 Score = 41.2 bits (95), Expect(2) = 7e-06
 Identities = 19/36 (52%), Positives = 25/36 (69%)
 Frame = +2

Query: 293 KEKLPPIDSRLRPDQRCLENDE*QSLEKQQTFFDQK 400
           KEKLPP DSRLRPDQR LE+ E +    ++   +Q+
Sbjct: 425 KEKLPPTDSRLRPDQRYLESGEYEMANSEKLRLEQR 460



 Score = 36.2 bits (82), Expect(2) = 7e-06
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = +3

Query: 231 FKSTSDSHLLWRKSKPIKVSTR 296
           F+S S+SHLLW++SKP K STR
Sbjct: 386 FESLSESHLLWKRSKPPKFSTR 407


Top