BLASTX nr result

ID: Chrysanthemum22_contig00018143 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00018143
         (424 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023728303.1| cyclic nucleotide-gated ion channel 1-like [...    82   2e-15
gb|KVH91106.1| Cyclic nucleotide-binding domain-containing prote...    79   4e-14
emb|CDP08690.1| unnamed protein product [Coffea canephora]             60   1e-07
ref|XP_019261381.1| PREDICTED: cyclic nucleotide-gated ion chann...    56   2e-06

>ref|XP_023728303.1| cyclic nucleotide-gated ion channel 1-like [Lactuca sativa]
 gb|PLY78076.1| hypothetical protein LSAT_3X139900 [Lactuca sativa]
          Length = 722

 Score = 82.4 bits (202), Expect = 2e-15
 Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
 Frame = -3

Query: 245 MKFKQERYVRFKDVMSPEQSYRYEQQNPTKYGLYHTKFKPSLSSMMDTVRTGFMHASERV 66
           MKFK ERY RFK + S +QSY  +QQNP KYGL     KP L S++D ++ GF  AS  V
Sbjct: 1   MKFKHERYTRFKGISS-DQSYSSDQQNPRKYGL-----KPYLRSVVDKIQRGFNQASRGV 54

Query: 65  GGLKSSSIF-RRSNDKPTKRVV 3
           GGLK+S IF   S+DKPTK+VV
Sbjct: 55  GGLKNSLIFPESSSDKPTKQVV 76


>gb|KVH91106.1| Cyclic nucleotide-binding domain-containing protein [Cynara
           cardunculus var. scolymus]
          Length = 782

 Score = 78.6 bits (192), Expect = 4e-14
 Identities = 37/72 (51%), Positives = 50/72 (69%)
 Frame = -3

Query: 218 RFKDVMSPEQSYRYEQQNPTKYGLYHTKFKPSLSSMMDTVRTGFMHASERVGGLKSSSIF 39
           + ++  SPEQSYR++Q+ PT YGLYH K K S SS+ ++++ G   ASE V GLK+S IF
Sbjct: 74  KIREDTSPEQSYRFDQRMPTTYGLYHMKLKLSFSSLKNSIQRGVKQASEGVSGLKNSLIF 133

Query: 38  RRSNDKPTKRVV 3
            +S DKP K  V
Sbjct: 134 HQSRDKPAKNEV 145


>emb|CDP08690.1| unnamed protein product [Coffea canephora]
          Length = 623

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 33/78 (42%), Positives = 48/78 (61%)
 Frame = -3

Query: 245 MKFKQERYVRFKDVMSPEQSYRYEQQNPTKYGLYHTKFKPSLSSMMDTVRTGFMHASERV 66
           M+ KQ+RYVRF+D  S   S+  +QQ  +  GL   + KPSL SM+ ++R GF   SER+
Sbjct: 1   MELKQDRYVRFEDWSSERTSFDSKQQFSSTRGLLSIR-KPSLGSMISSIRRGFERGSERM 59

Query: 65  GGLKSSSIFRRSNDKPTK 12
             LK S    R++D+P +
Sbjct: 60  KSLKRSPNASRTSDQPAE 77


>ref|XP_019261381.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Nicotiana
           attenuata]
 gb|OIT38534.1| cyclic nucleotide-gated ion channel 1 [Nicotiana attenuata]
          Length = 722

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 30/78 (38%), Positives = 41/78 (52%)
 Frame = -3

Query: 245 MKFKQERYVRFKDVMSPEQSYRYEQQNPTKYGLYHTKFKPSLSSMMDTVRTGFMHASERV 66
           M  KQ++YVRF+D  S + S+  E QN      +H + KPS S +M  +R  F   SER+
Sbjct: 2   MNLKQDKYVRFEDWQSEQSSFNSEHQNSPNNRPFHIR-KPSFSLLMSNIRRRFESGSERI 60

Query: 65  GGLKSSSIFRRSNDKPTK 12
              + S       DKPTK
Sbjct: 61  SSWRKSIRVHPLTDKPTK 78


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