BLASTX nr result

ID: Chrysanthemum22_contig00018141 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00018141
         (386 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY67479.1| hypothetical protein LSAT_6X52060 [Lactuca sativa]      74   1e-12
ref|XP_023742095.1| lysine--tRNA ligase, chloroplastic/mitochond...    74   1e-12
gb|KVH90856.1| hypothetical protein Ccrd_007115 [Cynara carduncu...    67   3e-10
ref|XP_022024971.1| transcription termination factor MTEF1, chlo...    65   1e-09
ref|XP_022001262.1| lysine--tRNA ligase, chloroplastic/mitochond...    60   7e-08

>gb|PLY67479.1| hypothetical protein LSAT_6X52060 [Lactuca sativa]
          Length = 591

 Score = 73.6 bits (179), Expect = 1e-12
 Identities = 45/91 (49%), Positives = 53/91 (58%), Gaps = 19/91 (20%)
 Frame = +2

Query: 113 MEVWSSLPLNHLFILP-------KSHFPVTIIRCCXXXXXXXXAA---VPKNSGRGLRSS 262
           ++VWSS PL HLF L        KS+ PVT++RCC        AA   VPK  GRG RSS
Sbjct: 4   LKVWSSRPLRHLFHLAASPPPTSKSYLPVTLVRCCSSSTSAAAAAAAAVPKQGGRGRRSS 63

Query: 263 AVATTTS---------IRLQKVEELNSNGFE 328
           A +TTTS         IRL+KVEEL S G+E
Sbjct: 64  AASTTTSTSDRDAIRAIRLKKVEELRSKGYE 94


>ref|XP_023742095.1| lysine--tRNA ligase, chloroplastic/mitochondrial [Lactuca sativa]
          Length = 593

 Score = 73.6 bits (179), Expect = 1e-12
 Identities = 45/91 (49%), Positives = 53/91 (58%), Gaps = 19/91 (20%)
 Frame = +2

Query: 113 MEVWSSLPLNHLFILP-------KSHFPVTIIRCCXXXXXXXXAA---VPKNSGRGLRSS 262
           ++VWSS PL HLF L        KS+ PVT++RCC        AA   VPK  GRG RSS
Sbjct: 6   LKVWSSRPLRHLFHLAASPPPTSKSYLPVTLVRCCSSSTSAAAAAAAAVPKQGGRGRRSS 65

Query: 263 AVATTTS---------IRLQKVEELNSNGFE 328
           A +TTTS         IRL+KVEEL S G+E
Sbjct: 66  AASTTTSTSDRDAIRAIRLKKVEELRSKGYE 96


>gb|KVH90856.1| hypothetical protein Ccrd_007115 [Cynara cardunculus var. scolymus]
          Length = 582

 Score = 67.0 bits (162), Expect = 3e-10
 Identities = 44/94 (46%), Positives = 49/94 (52%), Gaps = 22/94 (23%)
 Frame = +2

Query: 113 MEVWSSLPLNHLFILP---------KSHFPVTIIRCCXXXXXXXXAA----VPKNSGRGL 253
           ++VWSS PL HLF L          KS+ PVT IRCC        AA    VPK  GR  
Sbjct: 6   LKVWSSRPLRHLFHLASSSPPHLTSKSYLPVTFIRCCSSSSSTSAAATSAAVPKQGGRSR 65

Query: 254 RSSAVATTTS---------IRLQKVEELNSNGFE 328
           R SA +T TS         IRL+KVEEL S GFE
Sbjct: 66  RPSAASTATSTSDREAIRAIRLKKVEELRSKGFE 99


>ref|XP_022024971.1| transcription termination factor MTEF1, chloroplastic-like
           [Helianthus annuus]
 gb|OTG35113.1| putative mitochodrial transcription termination factor [Helianthus
           annuus]
          Length = 374

 Score = 65.1 bits (157), Expect = 1e-09
 Identities = 48/106 (45%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
 Frame = +2

Query: 113 MEVWSSLPLNHLFILPKSHF--PVTIIRCCXXXXXXXXAAVPKNSGRGLRSSAV------ 268
           MEV SSL L+HLF L +S    P T+IRCC        A  PK+ GR    S        
Sbjct: 1   MEVPSSLSLSHLFDLTQSPTSKPTTLIRCCSSSS----ATAPKHGGRSTPPSTPVLPSNR 56

Query: 269 ATTTSIRLQKVEELNSNG--FESPKTS-----SKTALISPKPSPPP 385
           AT   IRL+KVEE  + G  ++ P        SKT LISPKPSPPP
Sbjct: 57  ATLGPIRLKKVEEFRTKGVAYKPPPNHHLPPPSKTTLISPKPSPPP 102


>ref|XP_022001262.1| lysine--tRNA ligase, chloroplastic/mitochondrial [Helianthus
           annuus]
 gb|OTG01731.1| putative lysyl-tRNA synthetase, class II [Helianthus annuus]
          Length = 606

 Score = 60.1 bits (144), Expect = 7e-08
 Identities = 43/95 (45%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
 Frame = +2

Query: 113 MEVWSSLPLNHLF--------ILPKSHFPVTIIRCCXXXXXXXXAA------VPKNSGRG 250
           ++VWSS PL HLF        +LP S    T IRCC        AA      VPK +GRG
Sbjct: 15  LKVWSSRPLRHLFHVASSSSSLLPTSKSS-TFIRCCSSSSSATGAAAATTAAVPKQAGRG 73

Query: 251 LRSSAVATTTS---------IRLQKVEELNSNGFE 328
            RS A   TTS         IRL+KVEEL S GFE
Sbjct: 74  RRSPAAPNTTSTSDRDAIRAIRLKKVEELRSKGFE 108


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