BLASTX nr result

ID: Chrysanthemum22_contig00017983 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00017983
         (959 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006359824.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE...    43   7e-06
ref|XP_004237782.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE...    43   7e-06
ref|XP_015071634.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE...    44   9e-06

>ref|XP_006359824.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum tuberosum]
 ref|XP_015170058.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum tuberosum]
 ref|XP_015170059.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum tuberosum]
 ref|XP_015170060.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum tuberosum]
 ref|XP_015170061.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum tuberosum]
          Length = 419

 Score = 43.1 bits (100), Expect(2) = 7e-06
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -2

Query: 295 LKQPRRWVVNNQIKSIILRCPDQ 227
           L + RRWVVNNQIK+II+RCPDQ
Sbjct: 45  LHRNRRWVVNNQIKNIIMRCPDQ 67



 Score = 36.2 bits (82), Expect(2) = 7e-06
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = -1

Query: 344 YLYAYFSLWSMKKDPDLEAA 285
           +L   FSLWSMKKDPDLEAA
Sbjct: 25  HLVRRFSLWSMKKDPDLEAA 44


>ref|XP_004237782.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum
           lycopersicum]
          Length = 417

 Score = 43.1 bits (100), Expect(2) = 7e-06
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -2

Query: 295 LKQPRRWVVNNQIKSIILRCPDQ 227
           L + RRWVVNNQIK+II+RCPDQ
Sbjct: 45  LHRNRRWVVNNQIKNIIMRCPDQ 67



 Score = 36.2 bits (82), Expect(2) = 7e-06
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = -1

Query: 344 YLYAYFSLWSMKKDPDLEAA 285
           +L   FSLWSMKKDPDLEAA
Sbjct: 25  HLVRRFSLWSMKKDPDLEAA 44


>ref|XP_015071634.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum pennellii]
 ref|XP_015071635.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum pennellii]
 ref|XP_015071636.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum pennellii]
 ref|XP_015071637.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum pennellii]
          Length = 417

 Score = 44.3 bits (103), Expect(2) = 9e-06
 Identities = 18/24 (75%), Positives = 22/24 (91%)
 Frame = -2

Query: 298 ILKQPRRWVVNNQIKSIILRCPDQ 227
           +L + RRWVVNNQIK+II+RCPDQ
Sbjct: 44  VLHRNRRWVVNNQIKNIIMRCPDQ 67



 Score = 34.7 bits (78), Expect(2) = 9e-06
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = -1

Query: 344 YLYAYFSLWSMKKDPDLEA 288
           +L   FSLWSMKKDPDLEA
Sbjct: 25  HLVRRFSLWSMKKDPDLEA 43


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