BLASTX nr result
ID: Chrysanthemum22_contig00017983
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Chrysanthemum22_contig00017983 (959 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006359824.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 43 7e-06 ref|XP_004237782.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 43 7e-06 ref|XP_015071634.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 44 9e-06 >ref|XP_006359824.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum tuberosum] ref|XP_015170058.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum tuberosum] ref|XP_015170059.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum tuberosum] ref|XP_015170060.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum tuberosum] ref|XP_015170061.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum tuberosum] Length = 419 Score = 43.1 bits (100), Expect(2) = 7e-06 Identities = 18/23 (78%), Positives = 21/23 (91%) Frame = -2 Query: 295 LKQPRRWVVNNQIKSIILRCPDQ 227 L + RRWVVNNQIK+II+RCPDQ Sbjct: 45 LHRNRRWVVNNQIKNIIMRCPDQ 67 Score = 36.2 bits (82), Expect(2) = 7e-06 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = -1 Query: 344 YLYAYFSLWSMKKDPDLEAA 285 +L FSLWSMKKDPDLEAA Sbjct: 25 HLVRRFSLWSMKKDPDLEAA 44 >ref|XP_004237782.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum lycopersicum] Length = 417 Score = 43.1 bits (100), Expect(2) = 7e-06 Identities = 18/23 (78%), Positives = 21/23 (91%) Frame = -2 Query: 295 LKQPRRWVVNNQIKSIILRCPDQ 227 L + RRWVVNNQIK+II+RCPDQ Sbjct: 45 LHRNRRWVVNNQIKNIIMRCPDQ 67 Score = 36.2 bits (82), Expect(2) = 7e-06 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = -1 Query: 344 YLYAYFSLWSMKKDPDLEAA 285 +L FSLWSMKKDPDLEAA Sbjct: 25 HLVRRFSLWSMKKDPDLEAA 44 >ref|XP_015071634.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum pennellii] ref|XP_015071635.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum pennellii] ref|XP_015071636.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum pennellii] ref|XP_015071637.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum pennellii] Length = 417 Score = 44.3 bits (103), Expect(2) = 9e-06 Identities = 18/24 (75%), Positives = 22/24 (91%) Frame = -2 Query: 298 ILKQPRRWVVNNQIKSIILRCPDQ 227 +L + RRWVVNNQIK+II+RCPDQ Sbjct: 44 VLHRNRRWVVNNQIKNIIMRCPDQ 67 Score = 34.7 bits (78), Expect(2) = 9e-06 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -1 Query: 344 YLYAYFSLWSMKKDPDLEA 288 +L FSLWSMKKDPDLEA Sbjct: 25 HLVRRFSLWSMKKDPDLEA 43