BLASTX nr result
ID: Chrysanthemum22_contig00017780
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00017780
(614 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PLY95306.1| hypothetical protein LSAT_4X151621 [Lactuca sativa] 67 2e-11
gb|KVI09179.1| Nucleotide-binding, alpha-beta plait, partial [Cy... 70 8e-11
ref|XP_023728678.1| 28 kDa ribonucleoprotein, chloroplastic-like... 68 4e-10
ref|XP_016447517.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 65 7e-10
ref|XP_023750830.1| 28 kDa ribonucleoprotein, chloroplastic-like... 65 8e-10
ref|XP_021973588.1| 28 kDa ribonucleoprotein, chloroplastic-like... 67 9e-10
ref|XP_022005637.1| 28 kDa ribonucleoprotein, chloroplastic-like... 67 9e-10
ref|XP_022134798.1| 28 kDa ribonucleoprotein, chloroplastic-like... 67 2e-09
ref|XP_023530762.1| 28 kDa ribonucleoprotein, chloroplastic [Cuc... 66 2e-09
ref|XP_023002146.1| 28 kDa ribonucleoprotein, chloroplastic [Cuc... 66 2e-09
ref|XP_009777467.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 65 4e-09
ref|XP_019229371.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 65 4e-09
ref|XP_016464081.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 65 5e-09
ref|XP_009592488.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 65 5e-09
gb|PLY63478.1| hypothetical protein LSAT_4X54441 [Lactuca sativa] 65 5e-09
ref|XP_009343859.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 64 6e-09
gb|KZV57699.1| 28 kDa ribonucleoprotein, chloroplastic-like [Dor... 64 1e-08
gb|OAO92165.1| CP31B [Arabidopsis thaliana] 64 1e-08
ref|NP_199836.1| chloroplast RNA-binding protein 31B [Arabidopsi... 64 1e-08
ref|XP_006280900.1| RNA-binding protein CP31B, chloroplastic [Ca... 64 1e-08
>gb|PLY95306.1| hypothetical protein LSAT_4X151621 [Lactuca sativa]
Length = 74
Score = 67.0 bits (162), Expect = 2e-11
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 98 DEVIYNRDTEQSRGFGFVTMSTVEEAEKAVEAYNG 202
DEVIYNRDTEQSRGFGFVTMSTVEEA+K VE +NG
Sbjct: 28 DEVIYNRDTEQSRGFGFVTMSTVEEADKVVEKFNG 62
>gb|KVI09179.1| Nucleotide-binding, alpha-beta plait, partial [Cynara cardunculus
var. scolymus]
Length = 322
Score = 70.5 bits (171), Expect = 8e-11
Identities = 40/81 (49%), Positives = 46/81 (56%), Gaps = 30/81 (37%)
Frame = +2
Query: 50 DQTQAEEEGTYSEPTED------------------------------EVIYNRDTEQSRG 139
++ + EEE +YSEP ED EVIYNRDTEQSRG
Sbjct: 128 EEEEVEEEESYSEPPEDAKIFVGNLPYDYDSENLANLFSSAGVVEIAEVIYNRDTEQSRG 187
Query: 140 FGFVTMSTVEEAEKAVEAYNG 202
FGFVTMSTVEEAEKAV+ +NG
Sbjct: 188 FGFVTMSTVEEAEKAVDKFNG 208
>ref|XP_023728678.1| 28 kDa ribonucleoprotein, chloroplastic-like [Lactuca sativa]
gb|PLY77792.1| hypothetical protein LSAT_2X91041 [Lactuca sativa]
Length = 278
Score = 68.2 bits (165), Expect = 4e-10
Identities = 40/76 (52%), Positives = 43/76 (56%), Gaps = 30/76 (39%)
Frame = +2
Query: 65 EEEGTYSEPTED------------------------------EVIYNRDTEQSRGFGFVT 154
EEE +YSEP E+ EVIYNRDTEQSRGFGFVT
Sbjct: 89 EEEESYSEPPEEAKLFVGNLPYDFDSEKLANLFNSAGVVDIAEVIYNRDTEQSRGFGFVT 148
Query: 155 MSTVEEAEKAVEAYNG 202
MSTVEEAEKAVE +NG
Sbjct: 149 MSTVEEAEKAVEKFNG 164
>ref|XP_016447517.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like, partial
[Nicotiana tabacum]
Length = 161
Score = 65.5 bits (158), Expect = 7e-10
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 101 EVIYNRDTEQSRGFGFVTMSTVEEAEKAVEAYN 199
EVIYNRDT+QSRGFGFVTMSTVEEAEKAVE YN
Sbjct: 74 EVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYN 106
>ref|XP_023750830.1| 28 kDa ribonucleoprotein, chloroplastic-like [Lactuca sativa]
Length = 135
Score = 64.7 bits (156), Expect = 8e-10
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +2
Query: 101 EVIYNRDTEQSRGFGFVTMSTVEEAEKAVEAYNG 202
EVIYNRDTEQSRGFGFVTMSTVEEA+K VE +NG
Sbjct: 94 EVIYNRDTEQSRGFGFVTMSTVEEADKVVEKFNG 127
>ref|XP_021973588.1| 28 kDa ribonucleoprotein, chloroplastic-like [Helianthus annuus]
gb|OTG20971.1| putative nucleotide-binding alpha-beta plait domain-containing
protein [Helianthus annuus]
Length = 264
Score = 67.0 bits (162), Expect = 9e-10
Identities = 39/75 (52%), Positives = 42/75 (56%), Gaps = 30/75 (40%)
Frame = +2
Query: 68 EEGTYSEPTED------------------------------EVIYNRDTEQSRGFGFVTM 157
EE +YSEP ED EVIYNRDTEQSRGFGFVTM
Sbjct: 76 EEESYSEPPEDAKIFVGNLPYDLDSEKLAELFSSSGVVEIAEVIYNRDTEQSRGFGFVTM 135
Query: 158 STVEEAEKAVEAYNG 202
STVEEAEKAV+ +NG
Sbjct: 136 STVEEAEKAVDTFNG 150
>ref|XP_022005637.1| 28 kDa ribonucleoprotein, chloroplastic-like [Helianthus annuus]
gb|OTF98935.1| putative nucleotide-binding alpha-beta plait domain-containing
protein [Helianthus annuus]
Length = 264
Score = 67.0 bits (162), Expect = 9e-10
Identities = 39/78 (50%), Positives = 44/78 (56%), Gaps = 30/78 (38%)
Frame = +2
Query: 59 QAEEEGTYSEPTED------------------------------EVIYNRDTEQSRGFGF 148
+ +EE +YSEP ED EVIYNRDTEQSRGFGF
Sbjct: 73 EQDEEESYSEPPEDAKIFVGNLPYDIDSEKLAQLFSSAGVVEISEVIYNRDTEQSRGFGF 132
Query: 149 VTMSTVEEAEKAVEAYNG 202
VTMSTVEEAEKAVE ++G
Sbjct: 133 VTMSTVEEAEKAVEKFSG 150
>ref|XP_022134798.1| 28 kDa ribonucleoprotein, chloroplastic-like [Momordica charantia]
Length = 336
Score = 66.6 bits (161), Expect = 2e-09
Identities = 37/79 (46%), Positives = 44/79 (55%), Gaps = 30/79 (37%)
Frame = +2
Query: 53 QTQAEEEGTYSEPTED------------------------------EVIYNRDTEQSRGF 142
+ + EEEG+Y EP ED EVIYNR+T+QSRGF
Sbjct: 142 EEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIFGKAGTVEIAEVIYNRETDQSRGF 201
Query: 143 GFVTMSTVEEAEKAVEAYN 199
GFVTMSTVEEAEKAV+ +N
Sbjct: 202 GFVTMSTVEEAEKAVDTFN 220
>ref|XP_023530762.1| 28 kDa ribonucleoprotein, chloroplastic [Cucurbita pepo subsp.
pepo]
Length = 305
Score = 66.2 bits (160), Expect = 2e-09
Identities = 38/75 (50%), Positives = 42/75 (56%), Gaps = 30/75 (40%)
Frame = +2
Query: 65 EEEGTYSEPTED------------------------------EVIYNRDTEQSRGFGFVT 154
EEEG+Y EP ED EV+YNRDT+QSRGFGFVT
Sbjct: 115 EEEGSYVEPNEDAKLFVGNLPYDVDSQKLAMLFEKVGTVEIAEVVYNRDTDQSRGFGFVT 174
Query: 155 MSTVEEAEKAVEAYN 199
MSTVEEAEKAV+A N
Sbjct: 175 MSTVEEAEKAVDALN 189
>ref|XP_023002146.1| 28 kDa ribonucleoprotein, chloroplastic [Cucurbita maxima]
Length = 305
Score = 66.2 bits (160), Expect = 2e-09
Identities = 38/75 (50%), Positives = 42/75 (56%), Gaps = 30/75 (40%)
Frame = +2
Query: 65 EEEGTYSEPTED------------------------------EVIYNRDTEQSRGFGFVT 154
EEEG+Y EP ED EV+YNRDT+QSRGFGFVT
Sbjct: 115 EEEGSYVEPNEDAKLFVGNLPYDVDSQKLAMLFEKVGTVEIAEVVYNRDTDQSRGFGFVT 174
Query: 155 MSTVEEAEKAVEAYN 199
MSTVEEAEKAV+A N
Sbjct: 175 MSTVEEAEKAVDALN 189
>ref|XP_009777467.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Nicotiana
sylvestris]
ref|XP_016444405.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Nicotiana
tabacum]
sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor
emb|CAA40364.1| 31kD chloroplast ribonucleoprotein [Nicotiana sylvestris]
emb|CAA37885.1| unnamed protein product [Nicotiana sylvestris]
Length = 315
Score = 65.5 bits (158), Expect = 4e-09
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 101 EVIYNRDTEQSRGFGFVTMSTVEEAEKAVEAYN 199
EVIYNRDT+QSRGFGFVTMSTVEEAEKAVE YN
Sbjct: 166 EVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYN 198
>ref|XP_019229371.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Nicotiana
attenuata]
gb|OIT06342.1| 31 kda ribonucleoprotein, chloroplastic [Nicotiana attenuata]
Length = 316
Score = 65.5 bits (158), Expect = 4e-09
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 101 EVIYNRDTEQSRGFGFVTMSTVEEAEKAVEAYN 199
EVIYNRDT+QSRGFGFVTMSTVEEAEKAVE YN
Sbjct: 167 EVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYN 199
>ref|XP_016464081.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Nicotiana
tabacum]
Length = 319
Score = 65.5 bits (158), Expect = 5e-09
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 101 EVIYNRDTEQSRGFGFVTMSTVEEAEKAVEAYN 199
EVIYNRDT+QSRGFGFVTMSTVEEAEKAVE YN
Sbjct: 170 EVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYN 202
>ref|XP_009592488.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Nicotiana
tomentosiformis]
Length = 319
Score = 65.5 bits (158), Expect = 5e-09
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 101 EVIYNRDTEQSRGFGFVTMSTVEEAEKAVEAYN 199
EVIYNRDT+QSRGFGFVTMSTVEEAEKAVE YN
Sbjct: 170 EVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYN 202
>gb|PLY63478.1| hypothetical protein LSAT_4X54441 [Lactuca sativa]
Length = 250
Score = 64.7 bits (156), Expect = 5e-09
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +2
Query: 101 EVIYNRDTEQSRGFGFVTMSTVEEAEKAVEAYNG 202
EVIYNRDTEQSRGFGFVTMSTVEEA+K VE +NG
Sbjct: 205 EVIYNRDTEQSRGFGFVTMSTVEEADKVVEKFNG 238
>ref|XP_009343859.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Pyrus x
bretschneideri]
Length = 188
Score = 63.5 bits (153), Expect = 6e-09
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = +2
Query: 101 EVIYNRDTEQSRGFGFVTMSTVEEAEKAVEAYNGKASKV 217
EVIYNRDT+QSRGFGFVTMSTVEEA+KAVE Y+ S++
Sbjct: 150 EVIYNRDTDQSRGFGFVTMSTVEEADKAVELYSRYVSRL 188
>gb|KZV57699.1| 28 kDa ribonucleoprotein, chloroplastic-like [Dorcoceras
hygrometricum]
Length = 280
Score = 63.9 bits (154), Expect = 1e-08
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +2
Query: 101 EVIYNRDTEQSRGFGFVTMSTVEEAEKAVEAYNG 202
EVIYNR T+QSRGFGFVTMSTVEEAEKAVE +NG
Sbjct: 131 EVIYNRQTDQSRGFGFVTMSTVEEAEKAVEMFNG 164
>gb|OAO92165.1| CP31B [Arabidopsis thaliana]
Length = 289
Score = 63.9 bits (154), Expect = 1e-08
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +2
Query: 101 EVIYNRDTEQSRGFGFVTMSTVEEAEKAVEAYN 199
EVIYNRDT+QSRGFGFVTMSTVEEAEKAVE +N
Sbjct: 143 EVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFN 175
>ref|NP_199836.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
sp|Q9FGS0.1|CP31B_ARATH RecName: Full=RNA-binding protein CP31B, chloroplastic; Flags:
Precursor
dbj|BAB09396.1| RNA-binding protein-like [Arabidopsis thaliana]
gb|AAK63972.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gb|AAL76138.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gb|AED95918.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
Length = 289
Score = 63.9 bits (154), Expect = 1e-08
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +2
Query: 101 EVIYNRDTEQSRGFGFVTMSTVEEAEKAVEAYN 199
EVIYNRDT+QSRGFGFVTMSTVEEAEKAVE +N
Sbjct: 143 EVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFN 175
>ref|XP_006280900.1| RNA-binding protein CP31B, chloroplastic [Capsella rubella]
gb|EOA13798.1| hypothetical protein CARUB_v10026893mg [Capsella rubella]
Length = 291
Score = 63.9 bits (154), Expect = 1e-08
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +2
Query: 101 EVIYNRDTEQSRGFGFVTMSTVEEAEKAVEAYN 199
EVIYNRDT+QSRGFGFVTMSTVEEAEKAVE +N
Sbjct: 143 EVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFN 175