BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00017626
         (2309 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021969088.1| DNA-directed RNA polymerase IV subunit 1 iso...  1259   0.0  
ref|XP_021969087.1| DNA-directed RNA polymerase IV subunit 1 iso...  1259   0.0  
ref|XP_023772117.1| DNA-directed RNA polymerase IV subunit 1 iso...  1235   0.0  
ref|XP_023772113.1| DNA-directed RNA polymerase IV subunit 1 iso...  1235   0.0  
gb|PLY79057.1| hypothetical protein LSAT_3X5900 [Lactuca sativa]     1235   0.0  
gb|KVH95462.1| Aspartate decarboxylase-like domain-containing pr...  1137   0.0  
ref|XP_016717099.1| PREDICTED: DNA-directed RNA polymerase IV su...   786   0.0  
ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV su...   784   0.0  
ref|XP_022736884.1| DNA-directed RNA polymerase IV subunit 1 iso...   788   0.0  
ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV su...   784   0.0  
ref|XP_022736885.1| DNA-directed RNA polymerase IV subunit 1 iso...   788   0.0  
ref|XP_022736882.1| DNA-directed RNA polymerase IV subunit 1 iso...   788   0.0  
ref|XP_016713422.1| PREDICTED: DNA-directed RNA polymerase IV su...   783   0.0  
ref|XP_019072896.1| PREDICTED: DNA-directed RNA polymerase IV su...   779   0.0  
ref|XP_016717097.1| PREDICTED: DNA-directed RNA polymerase IV su...   786   0.0  
gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium r...   784   0.0  
ref|XP_017626687.1| PREDICTED: DNA-directed RNA polymerase IV su...   784   0.0  
ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV su...   784   0.0  
ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su...   779   0.0  
ref|XP_016713417.1| PREDICTED: DNA-directed RNA polymerase IV su...   783   0.0  

>ref|XP_021969088.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Helianthus
            annuus]
          Length = 1302

 Score = 1259 bits (3259), Expect = 0.0
 Identities = 625/770 (81%), Positives = 677/770 (87%), Gaps = 1/770 (0%)
 Frame = +1

Query: 1    RTRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIRDPDSTEDNPSKMHGLKYMKEV 180
            RTRAYRKMV FRGTANELS CV +CIKLSKIRAEKPT+RDPD+ +DNP+KMHGLKYMKEV
Sbjct: 111  RTRAYRKMVGFRGTANELSACVLECIKLSKIRAEKPTLRDPDA-DDNPAKMHGLKYMKEV 169

Query: 181  SLGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCGLRILQK 360
            SLGKRTDFCFR+VCVGDPYIKLDEIGVP ++AETMLVSEQLNS NWE+INASCGLRILQ+
Sbjct: 170  SLGKRTDFCFRMVCVGDPYIKLDEIGVPHEIAETMLVSEQLNSFNWEKINASCGLRILQR 229

Query: 361  GETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRVKVLPIS 540
            GE F+RRRG LVPVRYGDQLRIGDTVYRPL DGD+VL+NRPPSIH HSLIALRVKVLP++
Sbjct: 230  GEIFVRRRGRLVPVRYGDQLRIGDTVYRPLADGDVVLINRPPSIHSHSLIALRVKVLPVN 289

Query: 541  CVLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKNLISLSH 720
            CVLS NPL+C P RGDFDGDSLHGYIPQSLESR ELRELV+LENQLVDKQSGK+L+SLSH
Sbjct: 290  CVLSVNPLICSPLRGDFDGDSLHGYIPQSLESRVELRELVTLENQLVDKQSGKSLLSLSH 349

Query: 721  DSLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAVMGS-SCLWTGRQLFSLVLDKDF 897
            DSLT AHLMLEDGVFFNR QLQQLQMFC RQ+L+LPAVM     LWTGRQLFSLVLD +F
Sbjct: 350  DSLTAAHLMLEDGVFFNRSQLQQLQMFCPRQQLQLPAVMKKFKHLWTGRQLFSLVLDNEF 409

Query: 898  DANVAETQIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLHSAQELMIEWLS 1077
            D +V  TQIKNGEFVS LNPS+CLQ GD+NIY YLI+NF GD+VLEFLHSAQEL+IEW+S
Sbjct: 410  DLDVGGTQIKNGEFVSSLNPSSCLQEGDENIYGYLIKNFSGDKVLEFLHSAQELLIEWVS 469

Query: 1078 SRGFSVXXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQDFLTGDLTGNMTK 1257
             RGFSV           K NMNDEV+YGL EAERQAHGQLLMVDGHQDFLTG+LTGN   
Sbjct: 470  MRGFSVSLLDLYLSSDSKRNMNDEVVYGLREAERQAHGQLLMVDGHQDFLTGNLTGN--- 526

Query: 1258 KEGYSGLDSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATRENSFLSMLKAGSK 1437
             EGYS L SDKMC++QQT           FK+VFRD+Q+LIYSY ++ENSF+SMLKAGSK
Sbjct: 527  -EGYSELQSDKMCHDQQTLAALSRASAAAFKEVFRDLQSLIYSYVSKENSFVSMLKAGSK 585

Query: 1438 GNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHKRADSSFSSGVDRYVPYGVIKS 1617
            GNMLKFVQHSMCVGYQHSLVPLSF FPREFSCVSWN+HKRAD SF SGVDRYVPYGVIKS
Sbjct: 586  GNMLKFVQHSMCVGYQHSLVPLSFHFPREFSCVSWNNHKRADLSFPSGVDRYVPYGVIKS 645

Query: 1618 SFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFMRDLYIAYDGTVRNCYGNQL 1797
            SFLSGLNP E  VHSVTNRDASFGGHADISGTLFRKLMFFMRDLYI YDGTVRNCYGNQL
Sbjct: 646  SFLSGLNPFEFLVHSVTNRDASFGGHADISGTLFRKLMFFMRDLYIGYDGTVRNCYGNQL 705

Query: 1798 VQFSYNSKNAPGQSKSLLDKAECGAPVGSLAACAISEAAYGALDQPVSALENSPLLNLKK 1977
            VQF+YNS+NAPG+SKSLL K ECGA VGSLAACAISEAAYGALDQPVSALENSPLLNLKK
Sbjct: 706  VQFTYNSENAPGESKSLLAKEECGAAVGSLAACAISEAAYGALDQPVSALENSPLLNLKK 765

Query: 1978 VLECGVKKLSGNKTASLFLSQKLKRWNNGFEYGAIDVKNHXXXXXXXXXXXXXXIFYSPQ 2157
            VLECGV+KLSGNKTASLFLSQKLKRW+NGFEYGA+DVKNH              IFYS Q
Sbjct: 766  VLECGVRKLSGNKTASLFLSQKLKRWHNGFEYGALDVKNHLEKLLFQDVVSLVTIFYSQQ 825

Query: 2158 TGKRARISPWVCYFGISKEVASRKQLRVQSIINALKYKCADKASFKKLKL 2307
            TGKR+R SPW+CYF ISKE A RKQL+VQSIINAL+ KCAD ++FKKLKL
Sbjct: 826  TGKRSRNSPWICYFRISKEAADRKQLKVQSIINALRSKCADSSNFKKLKL 875


>ref|XP_021969087.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Helianthus
            annuus]
 gb|OTG21853.1| putative nuclear RNA polymerase D1A [Helianthus annuus]
          Length = 1439

 Score = 1259 bits (3259), Expect = 0.0
 Identities = 625/770 (81%), Positives = 677/770 (87%), Gaps = 1/770 (0%)
 Frame = +1

Query: 1    RTRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIRDPDSTEDNPSKMHGLKYMKEV 180
            RTRAYRKMV FRGTANELS CV +CIKLSKIRAEKPT+RDPD+ +DNP+KMHGLKYMKEV
Sbjct: 248  RTRAYRKMVGFRGTANELSACVLECIKLSKIRAEKPTLRDPDA-DDNPAKMHGLKYMKEV 306

Query: 181  SLGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCGLRILQK 360
            SLGKRTDFCFR+VCVGDPYIKLDEIGVP ++AETMLVSEQLNS NWE+INASCGLRILQ+
Sbjct: 307  SLGKRTDFCFRMVCVGDPYIKLDEIGVPHEIAETMLVSEQLNSFNWEKINASCGLRILQR 366

Query: 361  GETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRVKVLPIS 540
            GE F+RRRG LVPVRYGDQLRIGDTVYRPL DGD+VL+NRPPSIH HSLIALRVKVLP++
Sbjct: 367  GEIFVRRRGRLVPVRYGDQLRIGDTVYRPLADGDVVLINRPPSIHSHSLIALRVKVLPVN 426

Query: 541  CVLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKNLISLSH 720
            CVLS NPL+C P RGDFDGDSLHGYIPQSLESR ELRELV+LENQLVDKQSGK+L+SLSH
Sbjct: 427  CVLSVNPLICSPLRGDFDGDSLHGYIPQSLESRVELRELVTLENQLVDKQSGKSLLSLSH 486

Query: 721  DSLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAVMGS-SCLWTGRQLFSLVLDKDF 897
            DSLT AHLMLEDGVFFNR QLQQLQMFC RQ+L+LPAVM     LWTGRQLFSLVLD +F
Sbjct: 487  DSLTAAHLMLEDGVFFNRSQLQQLQMFCPRQQLQLPAVMKKFKHLWTGRQLFSLVLDNEF 546

Query: 898  DANVAETQIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLHSAQELMIEWLS 1077
            D +V  TQIKNGEFVS LNPS+CLQ GD+NIY YLI+NF GD+VLEFLHSAQEL+IEW+S
Sbjct: 547  DLDVGGTQIKNGEFVSSLNPSSCLQEGDENIYGYLIKNFSGDKVLEFLHSAQELLIEWVS 606

Query: 1078 SRGFSVXXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQDFLTGDLTGNMTK 1257
             RGFSV           K NMNDEV+YGL EAERQAHGQLLMVDGHQDFLTG+LTGN   
Sbjct: 607  MRGFSVSLLDLYLSSDSKRNMNDEVVYGLREAERQAHGQLLMVDGHQDFLTGNLTGN--- 663

Query: 1258 KEGYSGLDSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATRENSFLSMLKAGSK 1437
             EGYS L SDKMC++QQT           FK+VFRD+Q+LIYSY ++ENSF+SMLKAGSK
Sbjct: 664  -EGYSELQSDKMCHDQQTLAALSRASAAAFKEVFRDLQSLIYSYVSKENSFVSMLKAGSK 722

Query: 1438 GNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHKRADSSFSSGVDRYVPYGVIKS 1617
            GNMLKFVQHSMCVGYQHSLVPLSF FPREFSCVSWN+HKRAD SF SGVDRYVPYGVIKS
Sbjct: 723  GNMLKFVQHSMCVGYQHSLVPLSFHFPREFSCVSWNNHKRADLSFPSGVDRYVPYGVIKS 782

Query: 1618 SFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFMRDLYIAYDGTVRNCYGNQL 1797
            SFLSGLNP E  VHSVTNRDASFGGHADISGTLFRKLMFFMRDLYI YDGTVRNCYGNQL
Sbjct: 783  SFLSGLNPFEFLVHSVTNRDASFGGHADISGTLFRKLMFFMRDLYIGYDGTVRNCYGNQL 842

Query: 1798 VQFSYNSKNAPGQSKSLLDKAECGAPVGSLAACAISEAAYGALDQPVSALENSPLLNLKK 1977
            VQF+YNS+NAPG+SKSLL K ECGA VGSLAACAISEAAYGALDQPVSALENSPLLNLKK
Sbjct: 843  VQFTYNSENAPGESKSLLAKEECGAAVGSLAACAISEAAYGALDQPVSALENSPLLNLKK 902

Query: 1978 VLECGVKKLSGNKTASLFLSQKLKRWNNGFEYGAIDVKNHXXXXXXXXXXXXXXIFYSPQ 2157
            VLECGV+KLSGNKTASLFLSQKLKRW+NGFEYGA+DVKNH              IFYS Q
Sbjct: 903  VLECGVRKLSGNKTASLFLSQKLKRWHNGFEYGALDVKNHLEKLLFQDVVSLVTIFYSQQ 962

Query: 2158 TGKRARISPWVCYFGISKEVASRKQLRVQSIINALKYKCADKASFKKLKL 2307
            TGKR+R SPW+CYF ISKE A RKQL+VQSIINAL+ KCAD ++FKKLKL
Sbjct: 963  TGKRSRNSPWICYFRISKEAADRKQLKVQSIINALRSKCADSSNFKKLKL 1012


>ref|XP_023772117.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Lactuca sativa]
          Length = 1326

 Score = 1235 bits (3196), Expect = 0.0
 Identities = 614/779 (78%), Positives = 668/779 (85%), Gaps = 10/779 (1%)
 Frame = +1

Query: 1    RTRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIR--DPDSTEDNPSKMHGLKYMK 174
            RTRAYRKM+ FRGTANELS CV +CIKLSKIRAEKP+ R     + +DNPSKMHGLKY+K
Sbjct: 133  RTRAYRKMIGFRGTANELSACVIECIKLSKIRAEKPSFRMNTNGNNDDNPSKMHGLKYIK 192

Query: 175  EVSLGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCGLRIL 354
            EVSLGKRTDFCFR+VCVGDPYIKL+EIGVP  +AETMLVSEQLNSLNWE+INASCGLRIL
Sbjct: 193  EVSLGKRTDFCFRMVCVGDPYIKLNEIGVPHHIAETMLVSEQLNSLNWEKINASCGLRIL 252

Query: 355  QKGETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRVKVLP 534
            Q+GETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVL+NRPPSIH HSLIALRVKVLP
Sbjct: 253  QRGETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLINRPPSIHSHSLIALRVKVLP 312

Query: 535  ISCVLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKNLISL 714
            I CVLS NPL+C P RGDFDGDSLHGYIPQSLESR EL ELVSLE Q+VDKQSGKNL+SL
Sbjct: 313  IDCVLSINPLICSPLRGDFDGDSLHGYIPQSLESRVELAELVSLEKQMVDKQSGKNLLSL 372

Query: 715  SHDSLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAVMG--------SSCLWTGRQL 870
            SHDSLT AHLMLEDGVFFNRPQLQQLQMFC  QK++LPA+M          SCLWTGRQL
Sbjct: 373  SHDSLTAAHLMLEDGVFFNRPQLQQLQMFCANQKIKLPAIMKKLKHSQMFKSCLWTGRQL 432

Query: 871  FSLVLDKDFDANVAETQIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLHSA 1050
            FSLVLDKDFD  V  T+IK GEFVS+LNPS+CLQ G++N+YSYLI+N++G EVLEFLHS 
Sbjct: 433  FSLVLDKDFDVGVNGTEIKKGEFVSVLNPSSCLQEGEENLYSYLIKNYEGKEVLEFLHSF 492

Query: 1051 QELMIEWLSSRGFSVXXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQDFLT 1230
            QEL+IEWLS RGFSV           + NMNDEVLYGL EAERQAHGQLLMVD HQDF  
Sbjct: 493  QELLIEWLSMRGFSVSLLDLYLSSDSQTNMNDEVLYGLLEAERQAHGQLLMVDPHQDF-- 550

Query: 1231 GDLTGNMTKKEGYSGLDSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATRENSF 1410
              LTGN+ + E Y+ LDS+K+C++QQT           FK+VFRD+QNLIY+YAT+ENSF
Sbjct: 551  --LTGNLPENEAYNELDSNKLCHDQQTSAALSRASASAFKEVFRDIQNLIYNYATKENSF 608

Query: 1411 LSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHKRADSSFSSGVDR 1590
            LSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSF FPR+FSC+SWNDHKRA SSF  G+DR
Sbjct: 609  LSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFHFPRDFSCISWNDHKRAVSSFPLGIDR 668

Query: 1591 YVPYGVIKSSFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFMRDLYIAYDGT 1770
            YVPYGVIKSSFLSGLNP+ELFVHSVTNRDASFGGHADISGTLFRKLMFFMRD+YI YDGT
Sbjct: 669  YVPYGVIKSSFLSGLNPLELFVHSVTNRDASFGGHADISGTLFRKLMFFMRDIYIGYDGT 728

Query: 1771 VRNCYGNQLVQFSYNSKNAPGQSKSLLDKAECGAPVGSLAACAISEAAYGALDQPVSALE 1950
            VR+CYGNQLVQFSY      GQS+SLL++AECGAPVGSLAACAISEAAYGALDQP+SALE
Sbjct: 729  VRSCYGNQLVQFSY------GQSESLLEEAECGAPVGSLAACAISEAAYGALDQPISALE 782

Query: 1951 NSPLLNLKKVLECGVKKLSGNKTASLFLSQKLKRWNNGFEYGAIDVKNHXXXXXXXXXXX 2130
            NSPLLNLKKVLECGV+KLSGNKTASLFLSQKLKRW NGFEYGAIDVKNH           
Sbjct: 783  NSPLLNLKKVLECGVRKLSGNKTASLFLSQKLKRWTNGFEYGAIDVKNHLEKLLFQDVVS 842

Query: 2131 XXXIFYSPQTGKRARISPWVCYFGISKEVASRKQLRVQSIINALKYKCADKASFKKLKL 2307
               IFYSPQTGKRA +SPW+CYF ISKE A RKQL+VQSIINALK KC D    KKLKL
Sbjct: 843  LVTIFYSPQTGKRAHVSPWICYFRISKEAACRKQLKVQSIINALKLKCTDSIKLKKLKL 901


>ref|XP_023772113.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Lactuca sativa]
 ref|XP_023772114.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Lactuca sativa]
 ref|XP_023772115.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Lactuca sativa]
 ref|XP_023772116.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Lactuca sativa]
          Length = 1439

 Score = 1235 bits (3196), Expect = 0.0
 Identities = 614/779 (78%), Positives = 668/779 (85%), Gaps = 10/779 (1%)
 Frame = +1

Query: 1    RTRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIR--DPDSTEDNPSKMHGLKYMK 174
            RTRAYRKM+ FRGTANELS CV +CIKLSKIRAEKP+ R     + +DNPSKMHGLKY+K
Sbjct: 246  RTRAYRKMIGFRGTANELSACVIECIKLSKIRAEKPSFRMNTNGNNDDNPSKMHGLKYIK 305

Query: 175  EVSLGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCGLRIL 354
            EVSLGKRTDFCFR+VCVGDPYIKL+EIGVP  +AETMLVSEQLNSLNWE+INASCGLRIL
Sbjct: 306  EVSLGKRTDFCFRMVCVGDPYIKLNEIGVPHHIAETMLVSEQLNSLNWEKINASCGLRIL 365

Query: 355  QKGETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRVKVLP 534
            Q+GETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVL+NRPPSIH HSLIALRVKVLP
Sbjct: 366  QRGETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLINRPPSIHSHSLIALRVKVLP 425

Query: 535  ISCVLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKNLISL 714
            I CVLS NPL+C P RGDFDGDSLHGYIPQSLESR EL ELVSLE Q+VDKQSGKNL+SL
Sbjct: 426  IDCVLSINPLICSPLRGDFDGDSLHGYIPQSLESRVELAELVSLEKQMVDKQSGKNLLSL 485

Query: 715  SHDSLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAVMG--------SSCLWTGRQL 870
            SHDSLT AHLMLEDGVFFNRPQLQQLQMFC  QK++LPA+M          SCLWTGRQL
Sbjct: 486  SHDSLTAAHLMLEDGVFFNRPQLQQLQMFCANQKIKLPAIMKKLKHSQMFKSCLWTGRQL 545

Query: 871  FSLVLDKDFDANVAETQIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLHSA 1050
            FSLVLDKDFD  V  T+IK GEFVS+LNPS+CLQ G++N+YSYLI+N++G EVLEFLHS 
Sbjct: 546  FSLVLDKDFDVGVNGTEIKKGEFVSVLNPSSCLQEGEENLYSYLIKNYEGKEVLEFLHSF 605

Query: 1051 QELMIEWLSSRGFSVXXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQDFLT 1230
            QEL+IEWLS RGFSV           + NMNDEVLYGL EAERQAHGQLLMVD HQDF  
Sbjct: 606  QELLIEWLSMRGFSVSLLDLYLSSDSQTNMNDEVLYGLLEAERQAHGQLLMVDPHQDF-- 663

Query: 1231 GDLTGNMTKKEGYSGLDSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATRENSF 1410
              LTGN+ + E Y+ LDS+K+C++QQT           FK+VFRD+QNLIY+YAT+ENSF
Sbjct: 664  --LTGNLPENEAYNELDSNKLCHDQQTSAALSRASASAFKEVFRDIQNLIYNYATKENSF 721

Query: 1411 LSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHKRADSSFSSGVDR 1590
            LSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSF FPR+FSC+SWNDHKRA SSF  G+DR
Sbjct: 722  LSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFHFPRDFSCISWNDHKRAVSSFPLGIDR 781

Query: 1591 YVPYGVIKSSFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFMRDLYIAYDGT 1770
            YVPYGVIKSSFLSGLNP+ELFVHSVTNRDASFGGHADISGTLFRKLMFFMRD+YI YDGT
Sbjct: 782  YVPYGVIKSSFLSGLNPLELFVHSVTNRDASFGGHADISGTLFRKLMFFMRDIYIGYDGT 841

Query: 1771 VRNCYGNQLVQFSYNSKNAPGQSKSLLDKAECGAPVGSLAACAISEAAYGALDQPVSALE 1950
            VR+CYGNQLVQFSY      GQS+SLL++AECGAPVGSLAACAISEAAYGALDQP+SALE
Sbjct: 842  VRSCYGNQLVQFSY------GQSESLLEEAECGAPVGSLAACAISEAAYGALDQPISALE 895

Query: 1951 NSPLLNLKKVLECGVKKLSGNKTASLFLSQKLKRWNNGFEYGAIDVKNHXXXXXXXXXXX 2130
            NSPLLNLKKVLECGV+KLSGNKTASLFLSQKLKRW NGFEYGAIDVKNH           
Sbjct: 896  NSPLLNLKKVLECGVRKLSGNKTASLFLSQKLKRWTNGFEYGAIDVKNHLEKLLFQDVVS 955

Query: 2131 XXXIFYSPQTGKRARISPWVCYFGISKEVASRKQLRVQSIINALKYKCADKASFKKLKL 2307
               IFYSPQTGKRA +SPW+CYF ISKE A RKQL+VQSIINALK KC D    KKLKL
Sbjct: 956  LVTIFYSPQTGKRAHVSPWICYFRISKEAACRKQLKVQSIINALKLKCTDSIKLKKLKL 1014


>gb|PLY79057.1| hypothetical protein LSAT_3X5900 [Lactuca sativa]
          Length = 1421

 Score = 1235 bits (3196), Expect = 0.0
 Identities = 614/779 (78%), Positives = 668/779 (85%), Gaps = 10/779 (1%)
 Frame = +1

Query: 1    RTRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIR--DPDSTEDNPSKMHGLKYMK 174
            RTRAYRKM+ FRGTANELS CV +CIKLSKIRAEKP+ R     + +DNPSKMHGLKY+K
Sbjct: 246  RTRAYRKMIGFRGTANELSACVIECIKLSKIRAEKPSFRMNTNGNNDDNPSKMHGLKYIK 305

Query: 175  EVSLGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCGLRIL 354
            EVSLGKRTDFCFR+VCVGDPYIKL+EIGVP  +AETMLVSEQLNSLNWE+INASCGLRIL
Sbjct: 306  EVSLGKRTDFCFRMVCVGDPYIKLNEIGVPHHIAETMLVSEQLNSLNWEKINASCGLRIL 365

Query: 355  QKGETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRVKVLP 534
            Q+GETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVL+NRPPSIH HSLIALRVKVLP
Sbjct: 366  QRGETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLINRPPSIHSHSLIALRVKVLP 425

Query: 535  ISCVLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKNLISL 714
            I CVLS NPL+C P RGDFDGDSLHGYIPQSLESR EL ELVSLE Q+VDKQSGKNL+SL
Sbjct: 426  IDCVLSINPLICSPLRGDFDGDSLHGYIPQSLESRVELAELVSLEKQMVDKQSGKNLLSL 485

Query: 715  SHDSLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAVMG--------SSCLWTGRQL 870
            SHDSLT AHLMLEDGVFFNRPQLQQLQMFC  QK++LPA+M          SCLWTGRQL
Sbjct: 486  SHDSLTAAHLMLEDGVFFNRPQLQQLQMFCANQKIKLPAIMKKLKHSQMFKSCLWTGRQL 545

Query: 871  FSLVLDKDFDANVAETQIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLHSA 1050
            FSLVLDKDFD  V  T+IK GEFVS+LNPS+CLQ G++N+YSYLI+N++G EVLEFLHS 
Sbjct: 546  FSLVLDKDFDVGVNGTEIKKGEFVSVLNPSSCLQEGEENLYSYLIKNYEGKEVLEFLHSF 605

Query: 1051 QELMIEWLSSRGFSVXXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQDFLT 1230
            QEL+IEWLS RGFSV           + NMNDEVLYGL EAERQAHGQLLMVD HQDF  
Sbjct: 606  QELLIEWLSMRGFSVSLLDLYLSSDSQTNMNDEVLYGLLEAERQAHGQLLMVDPHQDF-- 663

Query: 1231 GDLTGNMTKKEGYSGLDSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATRENSF 1410
              LTGN+ + E Y+ LDS+K+C++QQT           FK+VFRD+QNLIY+YAT+ENSF
Sbjct: 664  --LTGNLPENEAYNELDSNKLCHDQQTSAALSRASASAFKEVFRDIQNLIYNYATKENSF 721

Query: 1411 LSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHKRADSSFSSGVDR 1590
            LSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSF FPR+FSC+SWNDHKRA SSF  G+DR
Sbjct: 722  LSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFHFPRDFSCISWNDHKRAVSSFPLGIDR 781

Query: 1591 YVPYGVIKSSFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFMRDLYIAYDGT 1770
            YVPYGVIKSSFLSGLNP+ELFVHSVTNRDASFGGHADISGTLFRKLMFFMRD+YI YDGT
Sbjct: 782  YVPYGVIKSSFLSGLNPLELFVHSVTNRDASFGGHADISGTLFRKLMFFMRDIYIGYDGT 841

Query: 1771 VRNCYGNQLVQFSYNSKNAPGQSKSLLDKAECGAPVGSLAACAISEAAYGALDQPVSALE 1950
            VR+CYGNQLVQFSY      GQS+SLL++AECGAPVGSLAACAISEAAYGALDQP+SALE
Sbjct: 842  VRSCYGNQLVQFSY------GQSESLLEEAECGAPVGSLAACAISEAAYGALDQPISALE 895

Query: 1951 NSPLLNLKKVLECGVKKLSGNKTASLFLSQKLKRWNNGFEYGAIDVKNHXXXXXXXXXXX 2130
            NSPLLNLKKVLECGV+KLSGNKTASLFLSQKLKRW NGFEYGAIDVKNH           
Sbjct: 896  NSPLLNLKKVLECGVRKLSGNKTASLFLSQKLKRWTNGFEYGAIDVKNHLEKLLFQDVVS 955

Query: 2131 XXXIFYSPQTGKRARISPWVCYFGISKEVASRKQLRVQSIINALKYKCADKASFKKLKL 2307
               IFYSPQTGKRA +SPW+CYF ISKE A RKQL+VQSIINALK KC D    KKLKL
Sbjct: 956  LVTIFYSPQTGKRAHVSPWICYFRISKEAACRKQLKVQSIINALKLKCTDSIKLKKLKL 1014


>gb|KVH95462.1| Aspartate decarboxylase-like domain-containing protein [Cynara
            cardunculus var. scolymus]
          Length = 1394

 Score = 1137 bits (2942), Expect = 0.0
 Identities = 577/793 (72%), Positives = 632/793 (79%), Gaps = 24/793 (3%)
 Frame = +1

Query: 1    RTRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIRDPDSTEDNPSKMHGLKYMKEV 180
            RTRAYRKM+ FRGTANELS+CV DCIKLS                               
Sbjct: 236  RTRAYRKMIGFRGTANELSSCVIDCIKLS------------------------------- 264

Query: 181  SLGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCGLRILQK 360
                                KLDEIGVP D+AETMLVSEQLNSLNWE+INASCGLRILQ+
Sbjct: 265  --------------------KLDEIGVPHDIAETMLVSEQLNSLNWEKINASCGLRILQR 304

Query: 361  GETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRVKVLPIS 540
            GETFIRRRGGLVPVRYGD LRIGDTVYRPL+DGDIVL+NRPPSIH HSLIALRVKVLP++
Sbjct: 305  GETFIRRRGGLVPVRYGDNLRIGDTVYRPLNDGDIVLINRPPSIHSHSLIALRVKVLPVN 364

Query: 541  CVLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKNLISLSH 720
            CVLS NPL+C P RGDFDGDSLHGYIPQSLE R ELRELV+LENQLVDKQSG+NL+SLSH
Sbjct: 365  CVLSINPLICSPLRGDFDGDSLHGYIPQSLECRVELRELVTLENQLVDKQSGENLLSLSH 424

Query: 721  DSLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAVM--------------GSSCLWT 858
            DSLT AHLMLEDGVFFNRPQLQQLQMFCR Q+LELPA+M               +SC WT
Sbjct: 425  DSLTAAHLMLEDGVFFNRPQLQQLQMFCRHQQLELPAIMKKSKDSPLELPADMSNSCFWT 484

Query: 859  GRQLFSLVLDKDFDANVAETQIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEF 1038
            GRQLFSL++ KDFD +VA  QIK GEFV LLNPS+CLQA D+N+Y+YLI+NF G+EVLEF
Sbjct: 485  GRQLFSLLMAKDFDLSVAGAQIKRGEFVGLLNPSSCLQAADENLYNYLIKNFRGEEVLEF 544

Query: 1039 LHSAQELMIEWLSSRGFSVXXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQ 1218
            LHSAQEL+IEWLS RGFSV           ++NMNDEV YGL EAERQAHGQLLMVD HQ
Sbjct: 545  LHSAQELLIEWLSMRGFSVSLLDLYLSSDAQNNMNDEVFYGLREAERQAHGQLLMVDDHQ 604

Query: 1219 DFLTGDLTGNMTKKEGYSGLDSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATR 1398
            DFL+G LT N    EGYS L+S+K+C++QQT           FK+VFRD+QNLIY+YAT+
Sbjct: 605  DFLSGKLTEN----EGYSELESEKLCHDQQTSAALSRASAAAFKEVFRDLQNLIYNYATK 660

Query: 1399 ENSFLSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHKRADSSFSS 1578
            +NSFLSMLKAGSKGNMLKFVQHSMC+GYQHSLVPLSF FPR+FSCVSWN+HKRA+ SF  
Sbjct: 661  DNSFLSMLKAGSKGNMLKFVQHSMCLGYQHSLVPLSFHFPRQFSCVSWNNHKRAELSFPL 720

Query: 1579 GVDRYVPYGVIKSSFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFMRDLYIA 1758
            GVDRYVPYGVIKSSFL+GLNP+E FVHSVTNRDASFGGHADISGTLFRKLMFFMRD+Y+ 
Sbjct: 721  GVDRYVPYGVIKSSFLAGLNPLEFFVHSVTNRDASFGGHADISGTLFRKLMFFMRDMYVG 780

Query: 1759 YDGTVRNCYGNQLVQFSYNSKNAPGQSKSLLDKAECGAPVGSLAACAISEAAYGALDQPV 1938
            YDGTVRNCYGNQLVQFSYNSKNAPGQSKSLL+ AECG PVGSLAACAISEAAYGALDQP+
Sbjct: 781  YDGTVRNCYGNQLVQFSYNSKNAPGQSKSLLNNAECGEPVGSLAACAISEAAYGALDQPI 840

Query: 1939 SALENSPLLNLKKVLECGVKKLSGNKTASLFLSQKLKRWNNGFEYGAIDVKNHXXXXXXX 2118
            SALENSPLLNLKKVLECGV+KLSGNKTASLFLSQKLKRW NGFEYGAIDVKNH       
Sbjct: 841  SALENSPLLNLKKVLECGVRKLSGNKTASLFLSQKLKRWTNGFEYGAIDVKNHLEKLLFQ 900

Query: 2119 XXXXXXXIF----------YSPQTGKRARISPWVCYFGISKEVASRKQLRVQSIINALKY 2268
                   +           YSPQTGKR+R SPW+CYF ISKE ASRKQL+VQSIINALK 
Sbjct: 901  DVVSLITVLFLTIFVMLTSYSPQTGKRSRFSPWICYFRISKEAASRKQLKVQSIINALKC 960

Query: 2269 KCADKASFKKLKL 2307
            KC+D  S KKLKL
Sbjct: 961  KCSDSTSLKKLKL 973


>ref|XP_016717099.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Gossypium hirsutum]
          Length = 1340

 Score =  786 bits (2029), Expect = 0.0
 Identities = 412/799 (51%), Positives = 537/799 (67%), Gaps = 30/799 (3%)
 Frame = +1

Query: 1    RTRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIRDP------DSTEDNPSKMHGL 162
            RTR Y+K+V FRG ANELS+ V +C+K+SK+  EKP+  D          +D+ S M GL
Sbjct: 121  RTRVYKKLVDFRGLANELSSHVLECLKISKLHVEKPSTEDSALIAALKKNKDSASNMSGL 180

Query: 163  KYMKEVSLGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCG 342
            +YMK+V LGKR D CFR+V  G+P +KL EIG+P  +AE + ++EQLN  N ER+   C 
Sbjct: 181  RYMKDVILGKRNDHCFRMVLTGNPNLKLSEIGIPCHVAEKLQIAEQLNRWNEERLKTCCN 240

Query: 343  LRILQKGETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRV 522
            LRIL+KGE  IRR G LV +R+ +++++GDT+YRPL+DGD VL+NRPPSIH HSLIAL V
Sbjct: 241  LRILEKGEIRIRREGKLVRIRHNEKVQVGDTIYRPLNDGDTVLINRPPSIHQHSLIALSV 300

Query: 523  KVLPISCVLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKN 702
            KVLP++ V+S NPL+C PFRGDFDGD LHGY+PQS+ +R EL ELVSL+ QL++ QSG+N
Sbjct: 301  KVLPVNSVVSINPLICSPFRGDFDGDCLHGYVPQSINTRVELSELVSLDRQLINGQSGRN 360

Query: 703  LISLSHDSLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAVMG----SSCLWTGRQL 870
            L+SLSHDSLT A+L+ EDGV  N  Q+QQL+MFC      LPA++     S+ +WTG+QL
Sbjct: 361  LLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMFCPNHS-PLPAIVKAPLLSNPVWTGKQL 419

Query: 871  FSLVLDKDFDANVA--ETQIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLH 1044
            FS++   +FD   A  +  I NG+ +     S+ L+  D N++  LI++F G +VL+FLH
Sbjct: 420  FSMLFPPEFDYVFAPSDVVIHNGDLICSSEGSSWLRDADGNLFQSLIKHFQG-KVLDFLH 478

Query: 1045 SAQELMIEWLSSRGFSV--XXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQ 1218
            +AQE++ EWLS RG SV             + NM DE+ YGL EAE+  + + LMVD  Q
Sbjct: 479  AAQEVLCEWLSMRGLSVSLLDLYLSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQ 538

Query: 1219 DFLTGDLTGNMTKKEGYSGLDSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATR 1398
            DF    L GN  +   +  LD ++MCYE+Q            FKQVFRD+QNL+Y YA +
Sbjct: 539  DF----LAGNDEETNRFMVLDVEQMCYEKQRSAALSQASVDSFKQVFRDIQNLLYKYANK 594

Query: 1399 ENSFLSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHK------RA 1560
            +NS  +M KAGSKGN+LK VQHSMC+G QHSLVPLSF+FP + SC +WN+ K      + 
Sbjct: 595  DNSLFTMFKAGSKGNLLKLVQHSMCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKV 654

Query: 1561 DSSFSSGVDRYVPYGVIKSSFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFM 1740
            D +  S   +Y+PY V++SSF+ GLNP+E FVHSVT RD SF  +AD+ GTL R+LMFFM
Sbjct: 655  DDTDES-AKKYIPYAVVESSFVKGLNPLECFVHSVTTRDTSFSDNADLPGTLSRRLMFFM 713

Query: 1741 RDLYIAYDGTVRNCYGNQLVQFSYNSKNAPGQSKSLLDKAEC----------GAPVGSLA 1890
            RDL  AYDGTVRN YG+Q+VQF YN         S  DK             G PVGSL+
Sbjct: 714  RDLCTAYDGTVRNAYGDQVVQFCYNIDKGTFSPTSCPDKLVSQGNSLPDGIGGQPVGSLS 773

Query: 1891 ACAISEAAYGALDQPVSALENSPLLNLKKVLECGVKKLSGNKTASLFLSQKLKRWNNGFE 2070
            ACAISEAAY ALDQP+S LE+SPLLNLK+VLECG K+ + ++T SLFLS KL R  +G E
Sbjct: 774  ACAISEAAYSALDQPISLLESSPLLNLKRVLECGSKRSNADQTMSLFLSGKLVRRRHGQE 833

Query: 2071 YGAIDVKNHXXXXXXXXXXXXXXIFYSPQTGKRARISPWVCYFGISKEVASRKQLRVQSI 2250
            YGA++VKNH              I +SPQ     R SPWVC+F + K++  R++L V SI
Sbjct: 834  YGALEVKNHLERLIFKDIVSTVSIIFSPQMSSENRFSPWVCHFHVFKDIVKRRRLTVHSI 893

Query: 2251 INALKYKCADKASFKKLKL 2307
            I+AL   C +     K+ L
Sbjct: 894  IDALHMHCTNAKRLWKINL 912


>ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
            [Gossypium raimondii]
          Length = 1300

 Score =  784 bits (2025), Expect = 0.0
 Identities = 411/799 (51%), Positives = 538/799 (67%), Gaps = 30/799 (3%)
 Frame = +1

Query: 1    RTRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIRDP------DSTEDNPSKMHGL 162
            RTR Y+K+V FRG ANELS+ V +C+K+SK+  EKP+  D          +D+ S M GL
Sbjct: 262  RTRVYKKLVDFRGLANELSSHVLECLKISKLHVEKPSTEDSALIAALKKNKDSASNMSGL 321

Query: 163  KYMKEVSLGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCG 342
            +YMK+V LGKR D CFR+V  G+P +KL EIG+P  +AE + ++EQLN  N ER+   C 
Sbjct: 322  RYMKDVILGKRNDHCFRMVLTGNPNLKLSEIGIPCHVAEKLQIAEQLNRWNEERLKTCCN 381

Query: 343  LRILQKGETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRV 522
            LRIL+KGE  IRR G LV +R+ +++++GDT+YRPL+DGD VL+NRPPSIH HSLIAL V
Sbjct: 382  LRILEKGEIRIRREGKLVRIRHNEKVQVGDTIYRPLNDGDTVLINRPPSIHQHSLIALSV 441

Query: 523  KVLPISCVLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKN 702
            KVLP++ V+S NPL+C PFRGDFDGD LHGY+PQS+ +R EL ELVSL+ QL++ QSG+N
Sbjct: 442  KVLPVNSVVSINPLICSPFRGDFDGDCLHGYVPQSINTRVELSELVSLDRQLINGQSGRN 501

Query: 703  LISLSHDSLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAVMG----SSCLWTGRQL 870
            L+SLSHDSLT A+L+ EDGV  N  Q+QQL+MFC      LPA++     S+ +WTG+QL
Sbjct: 502  LLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMFCPNHS-PLPAIVKAPLLSNPVWTGKQL 560

Query: 871  FSLVLDKDFDANVAET--QIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLH 1044
            FS++   +FD   A +   I NG+ +     S+ L+  D N++  LI+++ G +VL+FLH
Sbjct: 561  FSMLFPPEFDYVFAPSGVVIHNGDLICSSEGSSWLRDADGNLFQSLIKHYQG-KVLDFLH 619

Query: 1045 SAQELMIEWLSSRGFSV--XXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQ 1218
            +AQE++ EWLS RG SV             + NM DE+ YGL EAE+  + + LMVD  Q
Sbjct: 620  AAQEVLCEWLSMRGLSVSLLDLYLSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQ 679

Query: 1219 DFLTGDLTGNMTKKEGYSGLDSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATR 1398
            DF    L GN  +   +  LD ++MCYE+Q            FKQVFRD+QNL+Y YA +
Sbjct: 680  DF----LAGNDEETNRFMVLDVEQMCYEKQRSAALSQASVDSFKQVFRDIQNLLYKYANK 735

Query: 1399 ENSFLSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHK------RA 1560
            +NS  +M KAGSKGN+LK VQHSMC+G QHSLVPLSF+FP + SC +WN+ K      + 
Sbjct: 736  DNSLFTMFKAGSKGNLLKLVQHSMCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKV 795

Query: 1561 DSSFSSGVDRYVPYGVIKSSFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFM 1740
            D +  S   +Y+PY V++SSF+ GLNP+E FVHSVT RD SF  +AD+ GTL R+LMFFM
Sbjct: 796  DDTDES-AKKYIPYAVVESSFVKGLNPLECFVHSVTTRDTSFSDNADLPGTLSRRLMFFM 854

Query: 1741 RDLYIAYDGTVRNCYGNQLVQFSYNSKNAPGQSKSLLDKAEC----------GAPVGSLA 1890
            RDL  AYDGTVRN YG+Q+VQF YN         S  DK             G PVGSL+
Sbjct: 855  RDLCAAYDGTVRNAYGDQVVQFCYNIDKGTFSPTSCPDKLVSQGSSLPDGIGGQPVGSLS 914

Query: 1891 ACAISEAAYGALDQPVSALENSPLLNLKKVLECGVKKLSGNKTASLFLSQKLKRWNNGFE 2070
            ACAISEAAY ALDQP+S LE+SPLLNLK+VLECG K+ + ++T SLFLS KL R  +G E
Sbjct: 915  ACAISEAAYSALDQPISLLESSPLLNLKRVLECGSKRSNADQTMSLFLSGKLVRRRHGQE 974

Query: 2071 YGAIDVKNHXXXXXXXXXXXXXXIFYSPQTGKRARISPWVCYFGISKEVASRKQLRVQSI 2250
            YGA++VKNH              I +SPQ     R SPWVC+F + K++ +R++L V SI
Sbjct: 975  YGALEVKNHLERLIFKDIVSTVSIIFSPQMSSENRFSPWVCHFHVFKDIVTRRRLTVHSI 1034

Query: 2251 INALKYKCADKASFKKLKL 2307
            I+AL   C +     K+ L
Sbjct: 1035 IDALHMHCTNAKRLWKINL 1053


>ref|XP_022736884.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Durio
            zibethinus]
          Length = 1471

 Score =  788 bits (2036), Expect = 0.0
 Identities = 410/790 (51%), Positives = 539/790 (68%), Gaps = 21/790 (2%)
 Frame = +1

Query: 1    RTRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIRDP------DSTEDNPSKMHGL 162
            RTR Y+K+V FRG ANELS+ V +C+K+SK+  EKP+  DP         +D+ S M GL
Sbjct: 262  RTRVYKKLVDFRGLANELSSHVLECLKISKLHLEKPSNEDPALIVAQKRNKDSASNMSGL 321

Query: 163  KYMKEVSLGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCG 342
            +YMK+V LGKR D CFR+V  G+P +KL EIG+P  +AE + ++EQLN  N ER+   C 
Sbjct: 322  RYMKDVILGKRNDHCFRMVLTGNPNLKLSEIGIPYHVAERLEIAEQLNRWNEERLKTCCN 381

Query: 343  LRILQKGETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRV 522
            LRI++KGE  IRR G LV +R+ +QL++GDT+YRPL++GD +L+NRPPSIH HSLIAL V
Sbjct: 382  LRIIEKGEIRIRREGRLVRIRHNEQLQVGDTIYRPLNNGDTMLINRPPSIHQHSLIALSV 441

Query: 523  KVLPISCVLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKN 702
            KVLP+S V+S NPL+C PFRGDFDGD LHGY+PQS+ +R EL ELVSL  QL++ QSG+N
Sbjct: 442  KVLPVSSVVSINPLICSPFRGDFDGDCLHGYVPQSISTRVELSELVSLNRQLINGQSGRN 501

Query: 703  LISLSHDSLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAV----MGSSCLWTGRQL 870
            L+SLSHDSLT A+L+ EDGV  N  ++QQL+MFC      LPA+    + S  LWTG+QL
Sbjct: 502  LLSLSHDSLTAAYLVKEDGVLLNLFEMQQLEMFCPNHS-PLPAIVKAPLMSKPLWTGKQL 560

Query: 871  FSLVLDKDFDANVA--ETQIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLH 1044
             S++  ++FD   A  +  I+ GEF++    +  L+  D NI+  LI+++ G +VL+FL+
Sbjct: 561  LSMLFPREFDYVFAPSDVVIRKGEFIASSEGATWLRDADGNIFQSLIKHYQG-KVLDFLY 619

Query: 1045 SAQELMIEWLSSRGFSV--XXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQ 1218
            +AQE++ EWLS RG SV             + NM DE+ Y L E E+  + + LMVD + 
Sbjct: 620  AAQEVLCEWLSMRGLSVSLLDLYLSSDSNSRKNMMDEIFYALQETEQTCNFKQLMVDSYH 679

Query: 1219 DFLTGDLTGNMTKKEGYSGLDSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATR 1398
            DFL G       + + +  LD ++MCYE+Q            FKQVFRD+QNL Y YA +
Sbjct: 680  DFLVGH-----EEIDSFMALDVERMCYEKQRSAALSQASVDSFKQVFRDIQNLFYKYANK 734

Query: 1399 ENSFLSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHK------RA 1560
            +NS L+M KAGSKGN+LK VQHSMC+G QHSLVPLSF+FP + SC +WN+ K      +A
Sbjct: 735  DNSLLTMFKAGSKGNLLKVVQHSMCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHGLTLKA 794

Query: 1561 DSSFSSGVDRYVPYGVIKSSFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFM 1740
            D +F S    Y+PY V++SSF+ GLNP+E FVHSVT+RD+SF  +AD+ GTL R+LMFFM
Sbjct: 795  DDTFES-AKNYIPYAVVESSFVKGLNPLECFVHSVTSRDSSFSDNADLPGTLSRRLMFFM 853

Query: 1741 RDLYIAYDGTVRNCYGNQLVQFSYN-SKNAPGQSKSLLDKAECGAPVGSLAACAISEAAY 1917
            RDL  AYDGTVRN YG+Q+VQF YN  K    Q  SLLD    G PVGSL+ACAISEAAY
Sbjct: 854  RDLCTAYDGTVRNAYGDQVVQFYYNIDKGTSSQGCSLLDGIG-GQPVGSLSACAISEAAY 912

Query: 1918 GALDQPVSALENSPLLNLKKVLECGVKKLSGNKTASLFLSQKLKRWNNGFEYGAIDVKNH 2097
             ALDQP+S LE SPLLNLK+VLECG KK + ++T SLFLS KL R  +G EYGA++VKNH
Sbjct: 913  SALDQPISLLETSPLLNLKRVLECGSKKSNADQTMSLFLSDKLGRRRHGLEYGALEVKNH 972

Query: 2098 XXXXXXXXXXXXXXIFYSPQTGKRARISPWVCYFGISKEVASRKQLRVQSIINALKYKCA 2277
                          I +S Q       SPWVC+F + K++  R++L + SII++L   C 
Sbjct: 973  LERLIFSDIVSTVSIIFSTQISSENHFSPWVCHFHVCKDIVKRRRLTMHSIIDSLYMHCT 1032

Query: 2278 DKASFKKLKL 2307
            +  +  K+ L
Sbjct: 1033 NAKALWKIDL 1042


>ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Gossypium raimondii]
          Length = 1340

 Score =  784 bits (2025), Expect = 0.0
 Identities = 411/799 (51%), Positives = 538/799 (67%), Gaps = 30/799 (3%)
 Frame = +1

Query: 1    RTRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIRDP------DSTEDNPSKMHGL 162
            RTR Y+K+V FRG ANELS+ V +C+K+SK+  EKP+  D          +D+ S M GL
Sbjct: 121  RTRVYKKLVDFRGLANELSSHVLECLKISKLHVEKPSTEDSALIAALKKNKDSASNMSGL 180

Query: 163  KYMKEVSLGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCG 342
            +YMK+V LGKR D CFR+V  G+P +KL EIG+P  +AE + ++EQLN  N ER+   C 
Sbjct: 181  RYMKDVILGKRNDHCFRMVLTGNPNLKLSEIGIPCHVAEKLQIAEQLNRWNEERLKTCCN 240

Query: 343  LRILQKGETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRV 522
            LRIL+KGE  IRR G LV +R+ +++++GDT+YRPL+DGD VL+NRPPSIH HSLIAL V
Sbjct: 241  LRILEKGEIRIRREGKLVRIRHNEKVQVGDTIYRPLNDGDTVLINRPPSIHQHSLIALSV 300

Query: 523  KVLPISCVLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKN 702
            KVLP++ V+S NPL+C PFRGDFDGD LHGY+PQS+ +R EL ELVSL+ QL++ QSG+N
Sbjct: 301  KVLPVNSVVSINPLICSPFRGDFDGDCLHGYVPQSINTRVELSELVSLDRQLINGQSGRN 360

Query: 703  LISLSHDSLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAVMG----SSCLWTGRQL 870
            L+SLSHDSLT A+L+ EDGV  N  Q+QQL+MFC      LPA++     S+ +WTG+QL
Sbjct: 361  LLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMFCPNHS-PLPAIVKAPLLSNPVWTGKQL 419

Query: 871  FSLVLDKDFDANVAET--QIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLH 1044
            FS++   +FD   A +   I NG+ +     S+ L+  D N++  LI+++ G +VL+FLH
Sbjct: 420  FSMLFPPEFDYVFAPSGVVIHNGDLICSSEGSSWLRDADGNLFQSLIKHYQG-KVLDFLH 478

Query: 1045 SAQELMIEWLSSRGFSV--XXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQ 1218
            +AQE++ EWLS RG SV             + NM DE+ YGL EAE+  + + LMVD  Q
Sbjct: 479  AAQEVLCEWLSMRGLSVSLLDLYLSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQ 538

Query: 1219 DFLTGDLTGNMTKKEGYSGLDSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATR 1398
            DF    L GN  +   +  LD ++MCYE+Q            FKQVFRD+QNL+Y YA +
Sbjct: 539  DF----LAGNDEETNRFMVLDVEQMCYEKQRSAALSQASVDSFKQVFRDIQNLLYKYANK 594

Query: 1399 ENSFLSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHK------RA 1560
            +NS  +M KAGSKGN+LK VQHSMC+G QHSLVPLSF+FP + SC +WN+ K      + 
Sbjct: 595  DNSLFTMFKAGSKGNLLKLVQHSMCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKV 654

Query: 1561 DSSFSSGVDRYVPYGVIKSSFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFM 1740
            D +  S   +Y+PY V++SSF+ GLNP+E FVHSVT RD SF  +AD+ GTL R+LMFFM
Sbjct: 655  DDTDES-AKKYIPYAVVESSFVKGLNPLECFVHSVTTRDTSFSDNADLPGTLSRRLMFFM 713

Query: 1741 RDLYIAYDGTVRNCYGNQLVQFSYNSKNAPGQSKSLLDKAEC----------GAPVGSLA 1890
            RDL  AYDGTVRN YG+Q+VQF YN         S  DK             G PVGSL+
Sbjct: 714  RDLCAAYDGTVRNAYGDQVVQFCYNIDKGTFSPTSCPDKLVSQGSSLPDGIGGQPVGSLS 773

Query: 1891 ACAISEAAYGALDQPVSALENSPLLNLKKVLECGVKKLSGNKTASLFLSQKLKRWNNGFE 2070
            ACAISEAAY ALDQP+S LE+SPLLNLK+VLECG K+ + ++T SLFLS KL R  +G E
Sbjct: 774  ACAISEAAYSALDQPISLLESSPLLNLKRVLECGSKRSNADQTMSLFLSGKLVRRRHGQE 833

Query: 2071 YGAIDVKNHXXXXXXXXXXXXXXIFYSPQTGKRARISPWVCYFGISKEVASRKQLRVQSI 2250
            YGA++VKNH              I +SPQ     R SPWVC+F + K++ +R++L V SI
Sbjct: 834  YGALEVKNHLERLIFKDIVSTVSIIFSPQMSSENRFSPWVCHFHVFKDIVTRRRLTVHSI 893

Query: 2251 INALKYKCADKASFKKLKL 2307
            I+AL   C +     K+ L
Sbjct: 894  IDALHMHCTNAKRLWKINL 912


>ref|XP_022736885.1| DNA-directed RNA polymerase IV subunit 1 isoform X3 [Durio
            zibethinus]
          Length = 1483

 Score =  788 bits (2036), Expect = 0.0
 Identities = 410/790 (51%), Positives = 539/790 (68%), Gaps = 21/790 (2%)
 Frame = +1

Query: 1    RTRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIRDP------DSTEDNPSKMHGL 162
            RTR Y+K+V FRG ANELS+ V +C+K+SK+  EKP+  DP         +D+ S M GL
Sbjct: 274  RTRVYKKLVDFRGLANELSSHVLECLKISKLHLEKPSNEDPALIVAQKRNKDSASNMSGL 333

Query: 163  KYMKEVSLGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCG 342
            +YMK+V LGKR D CFR+V  G+P +KL EIG+P  +AE + ++EQLN  N ER+   C 
Sbjct: 334  RYMKDVILGKRNDHCFRMVLTGNPNLKLSEIGIPYHVAERLEIAEQLNRWNEERLKTCCN 393

Query: 343  LRILQKGETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRV 522
            LRI++KGE  IRR G LV +R+ +QL++GDT+YRPL++GD +L+NRPPSIH HSLIAL V
Sbjct: 394  LRIIEKGEIRIRREGRLVRIRHNEQLQVGDTIYRPLNNGDTMLINRPPSIHQHSLIALSV 453

Query: 523  KVLPISCVLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKN 702
            KVLP+S V+S NPL+C PFRGDFDGD LHGY+PQS+ +R EL ELVSL  QL++ QSG+N
Sbjct: 454  KVLPVSSVVSINPLICSPFRGDFDGDCLHGYVPQSISTRVELSELVSLNRQLINGQSGRN 513

Query: 703  LISLSHDSLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAV----MGSSCLWTGRQL 870
            L+SLSHDSLT A+L+ EDGV  N  ++QQL+MFC      LPA+    + S  LWTG+QL
Sbjct: 514  LLSLSHDSLTAAYLVKEDGVLLNLFEMQQLEMFCPNHS-PLPAIVKAPLMSKPLWTGKQL 572

Query: 871  FSLVLDKDFDANVA--ETQIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLH 1044
             S++  ++FD   A  +  I+ GEF++    +  L+  D NI+  LI+++ G +VL+FL+
Sbjct: 573  LSMLFPREFDYVFAPSDVVIRKGEFIASSEGATWLRDADGNIFQSLIKHYQG-KVLDFLY 631

Query: 1045 SAQELMIEWLSSRGFSV--XXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQ 1218
            +AQE++ EWLS RG SV             + NM DE+ Y L E E+  + + LMVD + 
Sbjct: 632  AAQEVLCEWLSMRGLSVSLLDLYLSSDSNSRKNMMDEIFYALQETEQTCNFKQLMVDSYH 691

Query: 1219 DFLTGDLTGNMTKKEGYSGLDSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATR 1398
            DFL G       + + +  LD ++MCYE+Q            FKQVFRD+QNL Y YA +
Sbjct: 692  DFLVGH-----EEIDSFMALDVERMCYEKQRSAALSQASVDSFKQVFRDIQNLFYKYANK 746

Query: 1399 ENSFLSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHK------RA 1560
            +NS L+M KAGSKGN+LK VQHSMC+G QHSLVPLSF+FP + SC +WN+ K      +A
Sbjct: 747  DNSLLTMFKAGSKGNLLKVVQHSMCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHGLTLKA 806

Query: 1561 DSSFSSGVDRYVPYGVIKSSFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFM 1740
            D +F S    Y+PY V++SSF+ GLNP+E FVHSVT+RD+SF  +AD+ GTL R+LMFFM
Sbjct: 807  DDTFES-AKNYIPYAVVESSFVKGLNPLECFVHSVTSRDSSFSDNADLPGTLSRRLMFFM 865

Query: 1741 RDLYIAYDGTVRNCYGNQLVQFSYN-SKNAPGQSKSLLDKAECGAPVGSLAACAISEAAY 1917
            RDL  AYDGTVRN YG+Q+VQF YN  K    Q  SLLD    G PVGSL+ACAISEAAY
Sbjct: 866  RDLCTAYDGTVRNAYGDQVVQFYYNIDKGTSSQGCSLLDGIG-GQPVGSLSACAISEAAY 924

Query: 1918 GALDQPVSALENSPLLNLKKVLECGVKKLSGNKTASLFLSQKLKRWNNGFEYGAIDVKNH 2097
             ALDQP+S LE SPLLNLK+VLECG KK + ++T SLFLS KL R  +G EYGA++VKNH
Sbjct: 925  SALDQPISLLETSPLLNLKRVLECGSKKSNADQTMSLFLSDKLGRRRHGLEYGALEVKNH 984

Query: 2098 XXXXXXXXXXXXXXIFYSPQTGKRARISPWVCYFGISKEVASRKQLRVQSIINALKYKCA 2277
                          I +S Q       SPWVC+F + K++  R++L + SII++L   C 
Sbjct: 985  LERLIFSDIVSTVSIIFSTQISSENHFSPWVCHFHVCKDIVKRRRLTMHSIIDSLYMHCT 1044

Query: 2278 DKASFKKLKL 2307
            +  +  K+ L
Sbjct: 1045 NAKALWKIDL 1054


>ref|XP_022736882.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Durio
            zibethinus]
 ref|XP_022736883.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Durio
            zibethinus]
          Length = 1517

 Score =  788 bits (2036), Expect = 0.0
 Identities = 410/790 (51%), Positives = 539/790 (68%), Gaps = 21/790 (2%)
 Frame = +1

Query: 1    RTRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIRDP------DSTEDNPSKMHGL 162
            RTR Y+K+V FRG ANELS+ V +C+K+SK+  EKP+  DP         +D+ S M GL
Sbjct: 308  RTRVYKKLVDFRGLANELSSHVLECLKISKLHLEKPSNEDPALIVAQKRNKDSASNMSGL 367

Query: 163  KYMKEVSLGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCG 342
            +YMK+V LGKR D CFR+V  G+P +KL EIG+P  +AE + ++EQLN  N ER+   C 
Sbjct: 368  RYMKDVILGKRNDHCFRMVLTGNPNLKLSEIGIPYHVAERLEIAEQLNRWNEERLKTCCN 427

Query: 343  LRILQKGETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRV 522
            LRI++KGE  IRR G LV +R+ +QL++GDT+YRPL++GD +L+NRPPSIH HSLIAL V
Sbjct: 428  LRIIEKGEIRIRREGRLVRIRHNEQLQVGDTIYRPLNNGDTMLINRPPSIHQHSLIALSV 487

Query: 523  KVLPISCVLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKN 702
            KVLP+S V+S NPL+C PFRGDFDGD LHGY+PQS+ +R EL ELVSL  QL++ QSG+N
Sbjct: 488  KVLPVSSVVSINPLICSPFRGDFDGDCLHGYVPQSISTRVELSELVSLNRQLINGQSGRN 547

Query: 703  LISLSHDSLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAV----MGSSCLWTGRQL 870
            L+SLSHDSLT A+L+ EDGV  N  ++QQL+MFC      LPA+    + S  LWTG+QL
Sbjct: 548  LLSLSHDSLTAAYLVKEDGVLLNLFEMQQLEMFCPNHS-PLPAIVKAPLMSKPLWTGKQL 606

Query: 871  FSLVLDKDFDANVA--ETQIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLH 1044
             S++  ++FD   A  +  I+ GEF++    +  L+  D NI+  LI+++ G +VL+FL+
Sbjct: 607  LSMLFPREFDYVFAPSDVVIRKGEFIASSEGATWLRDADGNIFQSLIKHYQG-KVLDFLY 665

Query: 1045 SAQELMIEWLSSRGFSV--XXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQ 1218
            +AQE++ EWLS RG SV             + NM DE+ Y L E E+  + + LMVD + 
Sbjct: 666  AAQEVLCEWLSMRGLSVSLLDLYLSSDSNSRKNMMDEIFYALQETEQTCNFKQLMVDSYH 725

Query: 1219 DFLTGDLTGNMTKKEGYSGLDSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATR 1398
            DFL G       + + +  LD ++MCYE+Q            FKQVFRD+QNL Y YA +
Sbjct: 726  DFLVGH-----EEIDSFMALDVERMCYEKQRSAALSQASVDSFKQVFRDIQNLFYKYANK 780

Query: 1399 ENSFLSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHK------RA 1560
            +NS L+M KAGSKGN+LK VQHSMC+G QHSLVPLSF+FP + SC +WN+ K      +A
Sbjct: 781  DNSLLTMFKAGSKGNLLKVVQHSMCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHGLTLKA 840

Query: 1561 DSSFSSGVDRYVPYGVIKSSFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFM 1740
            D +F S    Y+PY V++SSF+ GLNP+E FVHSVT+RD+SF  +AD+ GTL R+LMFFM
Sbjct: 841  DDTFES-AKNYIPYAVVESSFVKGLNPLECFVHSVTSRDSSFSDNADLPGTLSRRLMFFM 899

Query: 1741 RDLYIAYDGTVRNCYGNQLVQFSYN-SKNAPGQSKSLLDKAECGAPVGSLAACAISEAAY 1917
            RDL  AYDGTVRN YG+Q+VQF YN  K    Q  SLLD    G PVGSL+ACAISEAAY
Sbjct: 900  RDLCTAYDGTVRNAYGDQVVQFYYNIDKGTSSQGCSLLDGIG-GQPVGSLSACAISEAAY 958

Query: 1918 GALDQPVSALENSPLLNLKKVLECGVKKLSGNKTASLFLSQKLKRWNNGFEYGAIDVKNH 2097
             ALDQP+S LE SPLLNLK+VLECG KK + ++T SLFLS KL R  +G EYGA++VKNH
Sbjct: 959  SALDQPISLLETSPLLNLKRVLECGSKKSNADQTMSLFLSDKLGRRRHGLEYGALEVKNH 1018

Query: 2098 XXXXXXXXXXXXXXIFYSPQTGKRARISPWVCYFGISKEVASRKQLRVQSIINALKYKCA 2277
                          I +S Q       SPWVC+F + K++  R++L + SII++L   C 
Sbjct: 1019 LERLIFSDIVSTVSIIFSTQISSENHFSPWVCHFHVCKDIVKRRRLTMHSIIDSLYMHCT 1078

Query: 2278 DKASFKKLKL 2307
            +  +  K+ L
Sbjct: 1079 NAKALWKIDL 1088


>ref|XP_016713422.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Gossypium hirsutum]
          Length = 1340

 Score =  783 bits (2021), Expect = 0.0
 Identities = 409/799 (51%), Positives = 536/799 (67%), Gaps = 30/799 (3%)
 Frame = +1

Query: 1    RTRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIRDP------DSTEDNPSKMHGL 162
            RTR Y+K+V FRG ANELS+ V +C+K+SK+  EKP+  D          +D+ S M GL
Sbjct: 121  RTRVYKKLVDFRGLANELSSHVLECLKISKLHVEKPSTEDSALIAALKKNKDSASNMSGL 180

Query: 163  KYMKEVSLGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCG 342
            +YMK+V LGKR D CFR+V  G+P +KL EIG+P  +AE + ++EQLN  N ER+   C 
Sbjct: 181  RYMKDVILGKRNDHCFRMVLTGNPNLKLSEIGIPCHVAEKLQIAEQLNRWNEERLKTCCN 240

Query: 343  LRILQKGETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRV 522
            LRIL+KGE  IRR G LV +R+ +++++GDT+YRPL+DGD VL+NRPPSIH HSLIAL V
Sbjct: 241  LRILEKGEIRIRREGKLVRIRHNEKVQVGDTIYRPLNDGDTVLINRPPSIHQHSLIALSV 300

Query: 523  KVLPISCVLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKN 702
            KVLP++ V+S NPL+C PFRGDFDGD LHGY+PQS+ +R EL ELVSL+ QL++ QSG+N
Sbjct: 301  KVLPVNSVVSINPLICSPFRGDFDGDCLHGYVPQSINTRVELSELVSLDRQLINGQSGRN 360

Query: 703  LISLSHDSLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAVMG----SSCLWTGRQL 870
            L+SLSHDSLT A+L+ EDGV  N  Q+QQL+MFC      LPA++     S+ +WTG+QL
Sbjct: 361  LLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMFCPNHS-PLPAIVKAPLLSNPVWTGKQL 419

Query: 871  FSLVLDKDFDANVA--ETQIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLH 1044
            FS++   +FD   A  +  I NG+ +     S  L+  D N++  LI+++ G ++L+FLH
Sbjct: 420  FSMLFPPEFDYVFAPSDVVIHNGDLICSSEGSTWLRDADGNLFQSLIKHYQG-KILDFLH 478

Query: 1045 SAQELMIEWLSSRGFSV--XXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQ 1218
            +AQE++ EWLS RG SV             + NM DE+ YGL EAE+  + + LMVD  Q
Sbjct: 479  AAQEVLCEWLSMRGLSVSLLDLYLSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQ 538

Query: 1219 DFLTGDLTGNMTKKEGYSGLDSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATR 1398
            DF    L GN  +   +  LD ++MCYE+Q            FKQVFRD+QNL+Y YA +
Sbjct: 539  DF----LAGNDEETNRFMVLDVEQMCYEKQRSAALSQASVDSFKQVFRDIQNLLYKYANK 594

Query: 1399 ENSFLSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHK------RA 1560
            +NS  +M KAGSKGN+LK VQHSMC+G QHSLVPLSF+FP + SC +WN+ K      + 
Sbjct: 595  DNSLFTMFKAGSKGNLLKLVQHSMCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKV 654

Query: 1561 DSSFSSGVDRYVPYGVIKSSFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFM 1740
            D +  S   +Y+PY V++SSF+ GLNP+E FVHSVT RD SF  +AD+ GTL R+LMFFM
Sbjct: 655  DDTDES-AKKYIPYAVVESSFVKGLNPLECFVHSVTTRDTSFSDNADLPGTLSRRLMFFM 713

Query: 1741 RDLYIAYDGTVRNCYGNQLVQFSYNSKNAPGQSKSLLDKAEC----------GAPVGSLA 1890
            RDL  AYDGTVRN YG+Q+VQF YN+        S  DK             G PVGSL+
Sbjct: 714  RDLCTAYDGTVRNAYGDQVVQFCYNTNKGRFSPTSCPDKLVSQGNSLPDGIGGQPVGSLS 773

Query: 1891 ACAISEAAYGALDQPVSALENSPLLNLKKVLECGVKKLSGNKTASLFLSQKLKRWNNGFE 2070
            ACAISEAAY ALDQP+S LE+SPLLNLK+VLECG K+ + ++T SLFLS KL    +G E
Sbjct: 774  ACAISEAAYSALDQPISLLESSPLLNLKRVLECGAKRGNADQTMSLFLSGKLVSRRHGQE 833

Query: 2071 YGAIDVKNHXXXXXXXXXXXXXXIFYSPQTGKRARISPWVCYFGISKEVASRKQLRVQSI 2250
            YGA++VKNH              I +SPQ     R SPWVC+F + K++  R++L V SI
Sbjct: 834  YGALEVKNHLERLIFRDIVSTVSIIFSPQMSSENRFSPWVCHFHVFKDIVKRRRLTVHSI 893

Query: 2251 INALKYKCADKASFKKLKL 2307
            I+AL   C +     K+ L
Sbjct: 894  IDALHMHCTNAKRLWKINL 912


>ref|XP_019072896.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X4 [Vitis
            vinifera]
          Length = 1243

 Score =  779 bits (2012), Expect = 0.0
 Identities = 407/786 (51%), Positives = 545/786 (69%), Gaps = 18/786 (2%)
 Frame = +1

Query: 4    TRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIRDPDSTEDNPSKMHGLKYMKEVS 183
            +RAY+K+V FRGTANELS  V DC+K SK+R+EK T      ++D+ SKM GLK++KEV 
Sbjct: 261  SRAYKKLVDFRGTANELSCRVLDCLKTSKLRSEKST------SKDSASKMSGLKWIKEVL 314

Query: 184  LGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCGLRILQKG 363
            LGKRT+  FR++ VGDP ++L EIG+P  +AE +L+SE LNS NWE++   C LR+L+KG
Sbjct: 315  LGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKG 374

Query: 364  ETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRVKVLPISC 543
            +T++RR+G L PVR  +  + GD +YRPL DGDIVL+NRPPSIH HS+IAL VKVLP++ 
Sbjct: 375  QTYVRRKGTLAPVRRMNDFQAGDIIYRPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNS 434

Query: 544  VLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKNLISLSHD 723
            V+S NPL C PFRGDFDGD LHGYIPQS++SR EL ELV+L  QL+++QSG+NL+SLS D
Sbjct: 435  VVSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVELSELVALNRQLINRQSGRNLLSLSQD 494

Query: 724  SLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAVMGSSCL----WTGRQLFSLVLDK 891
            SL+ AHL++EDGV  N  Q+QQL+MFC  Q L+ PA++ +  L    WTG+QLFS++L  
Sbjct: 495  SLSAAHLVMEDGVLLNLFQMQQLEMFCPYQ-LQSPAIIKAPLLDTQVWTGKQLFSMLLPP 553

Query: 892  DFD--ANVAETQIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLHSAQELMI 1065
             F+    +   +I +GE +S  + SA L+  D N++S L+++  G + L+FL++AQE++ 
Sbjct: 554  GFNYVFPLNGVRISDGELISSSDGSAWLRDIDGNLFSSLVKDCQG-KALDFLYAAQEVLC 612

Query: 1066 EWLSSRGFSV--XXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQDFLTGDL 1239
            EWLS RG SV             + NM DEV  GL  AE+  H + L+VD  Q+FL G  
Sbjct: 613  EWLSMRGLSVSLSDIYLSSDSISRKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSG 672

Query: 1240 TGNMTKKEGYSGL--DSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATRENSFL 1413
              N       +G+  D   + YE+Q            FKQ FRD+QNL+Y YA ++NS L
Sbjct: 673  ENNQ------NGVVPDVQSLWYERQGSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLL 726

Query: 1414 SMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHK---RADSSFSSGV 1584
            +MLKAGSKGN+LK VQ  +C+G QHSLVPLSF+ P + SC +WN  K      +  S   
Sbjct: 727  AMLKAGSKGNLLKLVQQGLCLGLQHSLVPLSFKIPHQLSCAAWNKQKVPGLIQNDTSEYA 786

Query: 1585 DRYVPYGVIKSSFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFMRDLYIAYD 1764
            + Y+PY V+++SFL GLNP+E FVHSVT+RD+SF  +AD+ GTL R+LMFFMRDLYIAYD
Sbjct: 787  ESYIPYAVVENSFLMGLNPLECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYD 846

Query: 1765 GTVRNCYGNQLVQFSYNSKNAPGQSKSLLDKAEC-----GAPVGSLAACAISEAAYGALD 1929
            GTVRN YGNQLVQFSYN ++    S   +++  C     G PVGS++ACAISEAAY ALD
Sbjct: 847  GTVRNAYGNQLVQFSYNIEHTSTPSDG-INEDTCAYDMGGQPVGSISACAISEAAYSALD 905

Query: 1930 QPVSALENSPLLNLKKVLECGVKKLSGNKTASLFLSQKLKRWNNGFEYGAIDVKNHXXXX 2109
            QP+S LE SPLLNLK+VLECG++K + ++T SLFLS+KL++  +GFEYGA++VKNH    
Sbjct: 906  QPISLLEPSPLLNLKRVLECGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKL 965

Query: 2110 XXXXXXXXXXIFYSPQTGKRARISPWVCYFGISKEVASRKQLRVQSIINALKYKCADKAS 2289
                      I +SPQ G +   SPWVC+F + +E+A ++ L+  SII+AL  KC    +
Sbjct: 966  LFSDIVSTVMIVFSPQNGSKTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARA 1025

Query: 2290 FKKLKL 2307
              K+ L
Sbjct: 1026 ESKINL 1031


>ref|XP_016717097.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Gossypium hirsutum]
 ref|XP_016717098.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Gossypium hirsutum]
          Length = 1481

 Score =  786 bits (2029), Expect = 0.0
 Identities = 412/799 (51%), Positives = 537/799 (67%), Gaps = 30/799 (3%)
 Frame = +1

Query: 1    RTRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIRDP------DSTEDNPSKMHGL 162
            RTR Y+K+V FRG ANELS+ V +C+K+SK+  EKP+  D          +D+ S M GL
Sbjct: 262  RTRVYKKLVDFRGLANELSSHVLECLKISKLHVEKPSTEDSALIAALKKNKDSASNMSGL 321

Query: 163  KYMKEVSLGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCG 342
            +YMK+V LGKR D CFR+V  G+P +KL EIG+P  +AE + ++EQLN  N ER+   C 
Sbjct: 322  RYMKDVILGKRNDHCFRMVLTGNPNLKLSEIGIPCHVAEKLQIAEQLNRWNEERLKTCCN 381

Query: 343  LRILQKGETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRV 522
            LRIL+KGE  IRR G LV +R+ +++++GDT+YRPL+DGD VL+NRPPSIH HSLIAL V
Sbjct: 382  LRILEKGEIRIRREGKLVRIRHNEKVQVGDTIYRPLNDGDTVLINRPPSIHQHSLIALSV 441

Query: 523  KVLPISCVLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKN 702
            KVLP++ V+S NPL+C PFRGDFDGD LHGY+PQS+ +R EL ELVSL+ QL++ QSG+N
Sbjct: 442  KVLPVNSVVSINPLICSPFRGDFDGDCLHGYVPQSINTRVELSELVSLDRQLINGQSGRN 501

Query: 703  LISLSHDSLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAVMG----SSCLWTGRQL 870
            L+SLSHDSLT A+L+ EDGV  N  Q+QQL+MFC      LPA++     S+ +WTG+QL
Sbjct: 502  LLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMFCPNHS-PLPAIVKAPLLSNPVWTGKQL 560

Query: 871  FSLVLDKDFDANVA--ETQIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLH 1044
            FS++   +FD   A  +  I NG+ +     S+ L+  D N++  LI++F G +VL+FLH
Sbjct: 561  FSMLFPPEFDYVFAPSDVVIHNGDLICSSEGSSWLRDADGNLFQSLIKHFQG-KVLDFLH 619

Query: 1045 SAQELMIEWLSSRGFSV--XXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQ 1218
            +AQE++ EWLS RG SV             + NM DE+ YGL EAE+  + + LMVD  Q
Sbjct: 620  AAQEVLCEWLSMRGLSVSLLDLYLSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQ 679

Query: 1219 DFLTGDLTGNMTKKEGYSGLDSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATR 1398
            DF    L GN  +   +  LD ++MCYE+Q            FKQVFRD+QNL+Y YA +
Sbjct: 680  DF----LAGNDEETNRFMVLDVEQMCYEKQRSAALSQASVDSFKQVFRDIQNLLYKYANK 735

Query: 1399 ENSFLSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHK------RA 1560
            +NS  +M KAGSKGN+LK VQHSMC+G QHSLVPLSF+FP + SC +WN+ K      + 
Sbjct: 736  DNSLFTMFKAGSKGNLLKLVQHSMCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKV 795

Query: 1561 DSSFSSGVDRYVPYGVIKSSFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFM 1740
            D +  S   +Y+PY V++SSF+ GLNP+E FVHSVT RD SF  +AD+ GTL R+LMFFM
Sbjct: 796  DDTDES-AKKYIPYAVVESSFVKGLNPLECFVHSVTTRDTSFSDNADLPGTLSRRLMFFM 854

Query: 1741 RDLYIAYDGTVRNCYGNQLVQFSYNSKNAPGQSKSLLDKAEC----------GAPVGSLA 1890
            RDL  AYDGTVRN YG+Q+VQF YN         S  DK             G PVGSL+
Sbjct: 855  RDLCTAYDGTVRNAYGDQVVQFCYNIDKGTFSPTSCPDKLVSQGNSLPDGIGGQPVGSLS 914

Query: 1891 ACAISEAAYGALDQPVSALENSPLLNLKKVLECGVKKLSGNKTASLFLSQKLKRWNNGFE 2070
            ACAISEAAY ALDQP+S LE+SPLLNLK+VLECG K+ + ++T SLFLS KL R  +G E
Sbjct: 915  ACAISEAAYSALDQPISLLESSPLLNLKRVLECGSKRSNADQTMSLFLSGKLVRRRHGQE 974

Query: 2071 YGAIDVKNHXXXXXXXXXXXXXXIFYSPQTGKRARISPWVCYFGISKEVASRKQLRVQSI 2250
            YGA++VKNH              I +SPQ     R SPWVC+F + K++  R++L V SI
Sbjct: 975  YGALEVKNHLERLIFKDIVSTVSIIFSPQMSSENRFSPWVCHFHVFKDIVKRRRLTVHSI 1034

Query: 2251 INALKYKCADKASFKKLKL 2307
            I+AL   C +     K+ L
Sbjct: 1035 IDALHMHCTNAKRLWKINL 1053


>gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium raimondii]
          Length = 1478

 Score =  784 bits (2025), Expect = 0.0
 Identities = 411/799 (51%), Positives = 538/799 (67%), Gaps = 30/799 (3%)
 Frame = +1

Query: 1    RTRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIRDP------DSTEDNPSKMHGL 162
            RTR Y+K+V FRG ANELS+ V +C+K+SK+  EKP+  D          +D+ S M GL
Sbjct: 259  RTRVYKKLVDFRGLANELSSHVLECLKISKLHVEKPSTEDSALIAALKKNKDSASNMSGL 318

Query: 163  KYMKEVSLGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCG 342
            +YMK+V LGKR D CFR+V  G+P +KL EIG+P  +AE + ++EQLN  N ER+   C 
Sbjct: 319  RYMKDVILGKRNDHCFRMVLTGNPNLKLSEIGIPCHVAEKLQIAEQLNRWNEERLKTCCN 378

Query: 343  LRILQKGETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRV 522
            LRIL+KGE  IRR G LV +R+ +++++GDT+YRPL+DGD VL+NRPPSIH HSLIAL V
Sbjct: 379  LRILEKGEIRIRREGKLVRIRHNEKVQVGDTIYRPLNDGDTVLINRPPSIHQHSLIALSV 438

Query: 523  KVLPISCVLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKN 702
            KVLP++ V+S NPL+C PFRGDFDGD LHGY+PQS+ +R EL ELVSL+ QL++ QSG+N
Sbjct: 439  KVLPVNSVVSINPLICSPFRGDFDGDCLHGYVPQSINTRVELSELVSLDRQLINGQSGRN 498

Query: 703  LISLSHDSLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAVMG----SSCLWTGRQL 870
            L+SLSHDSLT A+L+ EDGV  N  Q+QQL+MFC      LPA++     S+ +WTG+QL
Sbjct: 499  LLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMFCPNHS-PLPAIVKAPLLSNPVWTGKQL 557

Query: 871  FSLVLDKDFDANVAET--QIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLH 1044
            FS++   +FD   A +   I NG+ +     S+ L+  D N++  LI+++ G +VL+FLH
Sbjct: 558  FSMLFPPEFDYVFAPSGVVIHNGDLICSSEGSSWLRDADGNLFQSLIKHYQG-KVLDFLH 616

Query: 1045 SAQELMIEWLSSRGFSV--XXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQ 1218
            +AQE++ EWLS RG SV             + NM DE+ YGL EAE+  + + LMVD  Q
Sbjct: 617  AAQEVLCEWLSMRGLSVSLLDLYLSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQ 676

Query: 1219 DFLTGDLTGNMTKKEGYSGLDSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATR 1398
            DF    L GN  +   +  LD ++MCYE+Q            FKQVFRD+QNL+Y YA +
Sbjct: 677  DF----LAGNDEETNRFMVLDVEQMCYEKQRSAALSQASVDSFKQVFRDIQNLLYKYANK 732

Query: 1399 ENSFLSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHK------RA 1560
            +NS  +M KAGSKGN+LK VQHSMC+G QHSLVPLSF+FP + SC +WN+ K      + 
Sbjct: 733  DNSLFTMFKAGSKGNLLKLVQHSMCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKV 792

Query: 1561 DSSFSSGVDRYVPYGVIKSSFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFM 1740
            D +  S   +Y+PY V++SSF+ GLNP+E FVHSVT RD SF  +AD+ GTL R+LMFFM
Sbjct: 793  DDTDES-AKKYIPYAVVESSFVKGLNPLECFVHSVTTRDTSFSDNADLPGTLSRRLMFFM 851

Query: 1741 RDLYIAYDGTVRNCYGNQLVQFSYNSKNAPGQSKSLLDKAEC----------GAPVGSLA 1890
            RDL  AYDGTVRN YG+Q+VQF YN         S  DK             G PVGSL+
Sbjct: 852  RDLCAAYDGTVRNAYGDQVVQFCYNIDKGTFSPTSCPDKLVSQGSSLPDGIGGQPVGSLS 911

Query: 1891 ACAISEAAYGALDQPVSALENSPLLNLKKVLECGVKKLSGNKTASLFLSQKLKRWNNGFE 2070
            ACAISEAAY ALDQP+S LE+SPLLNLK+VLECG K+ + ++T SLFLS KL R  +G E
Sbjct: 912  ACAISEAAYSALDQPISLLESSPLLNLKRVLECGSKRSNADQTMSLFLSGKLVRRRHGQE 971

Query: 2071 YGAIDVKNHXXXXXXXXXXXXXXIFYSPQTGKRARISPWVCYFGISKEVASRKQLRVQSI 2250
            YGA++VKNH              I +SPQ     R SPWVC+F + K++ +R++L V SI
Sbjct: 972  YGALEVKNHLERLIFKDIVSTVSIIFSPQMSSENRFSPWVCHFHVFKDIVTRRRLTVHSI 1031

Query: 2251 INALKYKCADKASFKKLKL 2307
            I+AL   C +     K+ L
Sbjct: 1032 IDALHMHCTNAKRLWKINL 1050


>ref|XP_017626687.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Gossypium
            arboreum]
 ref|XP_017626688.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Gossypium
            arboreum]
          Length = 1481

 Score =  784 bits (2025), Expect = 0.0
 Identities = 411/799 (51%), Positives = 536/799 (67%), Gaps = 30/799 (3%)
 Frame = +1

Query: 1    RTRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIRDP------DSTEDNPSKMHGL 162
            RTR Y+K+V FRG ANELS+ V +C+K+SK+  EKP+  D          +D+ S M GL
Sbjct: 262  RTRVYKKLVDFRGLANELSSHVLECLKISKLHVEKPSTEDSALIAALKKNKDSASNMSGL 321

Query: 163  KYMKEVSLGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCG 342
            +YMK+V LGKR D CFR+V  G+P +KL EIG+P  +AE + ++EQLN  N ER+   C 
Sbjct: 322  RYMKDVILGKRNDHCFRMVLTGNPNLKLSEIGIPCHVAEKLQIAEQLNRWNEERLKTCCN 381

Query: 343  LRILQKGETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRV 522
            LRIL+KGE  IRR   LV +R+ +++++GDT+YRPL+DGD VL+NRPPSIH HSLIAL V
Sbjct: 382  LRILEKGEIRIRRESKLVRIRHNEKVQVGDTIYRPLNDGDTVLINRPPSIHQHSLIALSV 441

Query: 523  KVLPISCVLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKN 702
            KVLP++ V+S NPL+C PFRGDFDGD LHGY+PQS+ +R EL ELVSL+ QL++ QSG+N
Sbjct: 442  KVLPVNSVVSINPLICSPFRGDFDGDCLHGYVPQSINTRVELSELVSLDRQLINGQSGRN 501

Query: 703  LISLSHDSLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAVMG----SSCLWTGRQL 870
            L+SLSHDSLT A+L+ EDGV  N  Q+QQL+MFC      LPA++     S+ +WTG+QL
Sbjct: 502  LLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMFCPNHS-PLPAIVKAPLLSNPVWTGKQL 560

Query: 871  FSLVLDKDFDANVA--ETQIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLH 1044
            FS++   +FD   A  +  I NG+ +     S  L+  D N++  LI+++ G +VL+FLH
Sbjct: 561  FSMLFPPEFDYVFAPSDVVIHNGDLICSSEGSTWLRDADGNLFQSLIKHYQG-KVLDFLH 619

Query: 1045 SAQELMIEWLSSRGFSV--XXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQ 1218
            +AQE++ EWLS RG SV             + NM DE+ YGL EAE+  + + LMVD  Q
Sbjct: 620  AAQEVLCEWLSMRGLSVSLLDLYLSPDSDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQ 679

Query: 1219 DFLTGDLTGNMTKKEGYSGLDSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATR 1398
            DF    L GN  +   +  LD ++MCYE+Q            FKQVFRD+QNL+Y YA +
Sbjct: 680  DF----LAGNDEETNRFMVLDVEQMCYEKQRSAALSQASVDSFKQVFRDIQNLLYKYANK 735

Query: 1399 ENSFLSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHK------RA 1560
            ENS  +M KAGSKGN+LK VQHSMC+G QHSLVPLSF+FP + SC +WN+ K      + 
Sbjct: 736  ENSLFTMFKAGSKGNLLKLVQHSMCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKV 795

Query: 1561 DSSFSSGVDRYVPYGVIKSSFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFM 1740
            D +  S   +Y+PY V++SSF+ GLNP+E FVHSVT RD SF  +AD+ GTL R+LMFFM
Sbjct: 796  DDTDES-AKKYIPYAVVESSFVKGLNPLECFVHSVTTRDTSFSDNADLPGTLSRRLMFFM 854

Query: 1741 RDLYIAYDGTVRNCYGNQLVQFSYNSKNAPGQSKSLLDKAEC----------GAPVGSLA 1890
            RDL  AYDGTVRN YG+Q+VQF YN+        S  DK             G PVGSL+
Sbjct: 855  RDLCTAYDGTVRNAYGDQVVQFCYNTNKGRFSPTSCPDKLVSQGNSLPDGIGGQPVGSLS 914

Query: 1891 ACAISEAAYGALDQPVSALENSPLLNLKKVLECGVKKLSGNKTASLFLSQKLKRWNNGFE 2070
            ACAISEAAY ALDQP+S LE+SPLLNLK+VLECG K+ + ++T SLFLS KL R  +G E
Sbjct: 915  ACAISEAAYSALDQPISLLESSPLLNLKRVLECGSKRSNADQTMSLFLSGKLVRRRHGQE 974

Query: 2071 YGAIDVKNHXXXXXXXXXXXXXXIFYSPQTGKRARISPWVCYFGISKEVASRKQLRVQSI 2250
            YGA++VKNH              I +SPQ     R SPWVC+F + K++  R++L V SI
Sbjct: 975  YGALEVKNHLERLIFKDIVSTVSIIFSPQMSSENRFSPWVCHFHVFKDIVKRRRLTVHSI 1034

Query: 2251 INALKYKCADKASFKKLKL 2307
            I+AL   C +     K+ L
Sbjct: 1035 IDALHMHCTNAKRLWKINL 1053


>ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Gossypium raimondii]
 ref|XP_012476046.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Gossypium raimondii]
 gb|KJB25755.1| hypothetical protein B456_004G207300 [Gossypium raimondii]
 gb|KJB25757.1| hypothetical protein B456_004G207300 [Gossypium raimondii]
          Length = 1481

 Score =  784 bits (2025), Expect = 0.0
 Identities = 411/799 (51%), Positives = 538/799 (67%), Gaps = 30/799 (3%)
 Frame = +1

Query: 1    RTRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIRDP------DSTEDNPSKMHGL 162
            RTR Y+K+V FRG ANELS+ V +C+K+SK+  EKP+  D          +D+ S M GL
Sbjct: 262  RTRVYKKLVDFRGLANELSSHVLECLKISKLHVEKPSTEDSALIAALKKNKDSASNMSGL 321

Query: 163  KYMKEVSLGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCG 342
            +YMK+V LGKR D CFR+V  G+P +KL EIG+P  +AE + ++EQLN  N ER+   C 
Sbjct: 322  RYMKDVILGKRNDHCFRMVLTGNPNLKLSEIGIPCHVAEKLQIAEQLNRWNEERLKTCCN 381

Query: 343  LRILQKGETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRV 522
            LRIL+KGE  IRR G LV +R+ +++++GDT+YRPL+DGD VL+NRPPSIH HSLIAL V
Sbjct: 382  LRILEKGEIRIRREGKLVRIRHNEKVQVGDTIYRPLNDGDTVLINRPPSIHQHSLIALSV 441

Query: 523  KVLPISCVLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKN 702
            KVLP++ V+S NPL+C PFRGDFDGD LHGY+PQS+ +R EL ELVSL+ QL++ QSG+N
Sbjct: 442  KVLPVNSVVSINPLICSPFRGDFDGDCLHGYVPQSINTRVELSELVSLDRQLINGQSGRN 501

Query: 703  LISLSHDSLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAVMG----SSCLWTGRQL 870
            L+SLSHDSLT A+L+ EDGV  N  Q+QQL+MFC      LPA++     S+ +WTG+QL
Sbjct: 502  LLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMFCPNHS-PLPAIVKAPLLSNPVWTGKQL 560

Query: 871  FSLVLDKDFDANVAET--QIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLH 1044
            FS++   +FD   A +   I NG+ +     S+ L+  D N++  LI+++ G +VL+FLH
Sbjct: 561  FSMLFPPEFDYVFAPSGVVIHNGDLICSSEGSSWLRDADGNLFQSLIKHYQG-KVLDFLH 619

Query: 1045 SAQELMIEWLSSRGFSV--XXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQ 1218
            +AQE++ EWLS RG SV             + NM DE+ YGL EAE+  + + LMVD  Q
Sbjct: 620  AAQEVLCEWLSMRGLSVSLLDLYLSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQ 679

Query: 1219 DFLTGDLTGNMTKKEGYSGLDSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATR 1398
            DF    L GN  +   +  LD ++MCYE+Q            FKQVFRD+QNL+Y YA +
Sbjct: 680  DF----LAGNDEETNRFMVLDVEQMCYEKQRSAALSQASVDSFKQVFRDIQNLLYKYANK 735

Query: 1399 ENSFLSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHK------RA 1560
            +NS  +M KAGSKGN+LK VQHSMC+G QHSLVPLSF+FP + SC +WN+ K      + 
Sbjct: 736  DNSLFTMFKAGSKGNLLKLVQHSMCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKV 795

Query: 1561 DSSFSSGVDRYVPYGVIKSSFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFM 1740
            D +  S   +Y+PY V++SSF+ GLNP+E FVHSVT RD SF  +AD+ GTL R+LMFFM
Sbjct: 796  DDTDES-AKKYIPYAVVESSFVKGLNPLECFVHSVTTRDTSFSDNADLPGTLSRRLMFFM 854

Query: 1741 RDLYIAYDGTVRNCYGNQLVQFSYNSKNAPGQSKSLLDKAEC----------GAPVGSLA 1890
            RDL  AYDGTVRN YG+Q+VQF YN         S  DK             G PVGSL+
Sbjct: 855  RDLCAAYDGTVRNAYGDQVVQFCYNIDKGTFSPTSCPDKLVSQGSSLPDGIGGQPVGSLS 914

Query: 1891 ACAISEAAYGALDQPVSALENSPLLNLKKVLECGVKKLSGNKTASLFLSQKLKRWNNGFE 2070
            ACAISEAAY ALDQP+S LE+SPLLNLK+VLECG K+ + ++T SLFLS KL R  +G E
Sbjct: 915  ACAISEAAYSALDQPISLLESSPLLNLKRVLECGSKRSNADQTMSLFLSGKLVRRRHGQE 974

Query: 2071 YGAIDVKNHXXXXXXXXXXXXXXIFYSPQTGKRARISPWVCYFGISKEVASRKQLRVQSI 2250
            YGA++VKNH              I +SPQ     R SPWVC+F + K++ +R++L V SI
Sbjct: 975  YGALEVKNHLERLIFKDIVSTVSIIFSPQMSSENRFSPWVCHFHVFKDIVTRRRLTVHSI 1034

Query: 2251 INALKYKCADKASFKKLKL 2307
            I+AL   C +     K+ L
Sbjct: 1035 IDALHMHCTNAKRLWKINL 1053


>ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3 [Vitis
            vinifera]
          Length = 1354

 Score =  779 bits (2012), Expect = 0.0
 Identities = 407/786 (51%), Positives = 545/786 (69%), Gaps = 18/786 (2%)
 Frame = +1

Query: 4    TRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIRDPDSTEDNPSKMHGLKYMKEVS 183
            +RAY+K+V FRGTANELS  V DC+K SK+R+EK T      ++D+ SKM GLK++KEV 
Sbjct: 155  SRAYKKLVDFRGTANELSCRVLDCLKTSKLRSEKST------SKDSASKMSGLKWIKEVL 208

Query: 184  LGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCGLRILQKG 363
            LGKRT+  FR++ VGDP ++L EIG+P  +AE +L+SE LNS NWE++   C LR+L+KG
Sbjct: 209  LGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKG 268

Query: 364  ETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRVKVLPISC 543
            +T++RR+G L PVR  +  + GD +YRPL DGDIVL+NRPPSIH HS+IAL VKVLP++ 
Sbjct: 269  QTYVRRKGTLAPVRRMNDFQAGDIIYRPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNS 328

Query: 544  VLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKNLISLSHD 723
            V+S NPL C PFRGDFDGD LHGYIPQS++SR EL ELV+L  QL+++QSG+NL+SLS D
Sbjct: 329  VVSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVELSELVALNRQLINRQSGRNLLSLSQD 388

Query: 724  SLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAVMGSSCL----WTGRQLFSLVLDK 891
            SL+ AHL++EDGV  N  Q+QQL+MFC  Q L+ PA++ +  L    WTG+QLFS++L  
Sbjct: 389  SLSAAHLVMEDGVLLNLFQMQQLEMFCPYQ-LQSPAIIKAPLLDTQVWTGKQLFSMLLPP 447

Query: 892  DFD--ANVAETQIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLHSAQELMI 1065
             F+    +   +I +GE +S  + SA L+  D N++S L+++  G + L+FL++AQE++ 
Sbjct: 448  GFNYVFPLNGVRISDGELISSSDGSAWLRDIDGNLFSSLVKDCQG-KALDFLYAAQEVLC 506

Query: 1066 EWLSSRGFSV--XXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQDFLTGDL 1239
            EWLS RG SV             + NM DEV  GL  AE+  H + L+VD  Q+FL G  
Sbjct: 507  EWLSMRGLSVSLSDIYLSSDSISRKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSG 566

Query: 1240 TGNMTKKEGYSGL--DSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATRENSFL 1413
              N       +G+  D   + YE+Q            FKQ FRD+QNL+Y YA ++NS L
Sbjct: 567  ENNQ------NGVVPDVQSLWYERQGSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLL 620

Query: 1414 SMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHK---RADSSFSSGV 1584
            +MLKAGSKGN+LK VQ  +C+G QHSLVPLSF+ P + SC +WN  K      +  S   
Sbjct: 621  AMLKAGSKGNLLKLVQQGLCLGLQHSLVPLSFKIPHQLSCAAWNKQKVPGLIQNDTSEYA 680

Query: 1585 DRYVPYGVIKSSFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFMRDLYIAYD 1764
            + Y+PY V+++SFL GLNP+E FVHSVT+RD+SF  +AD+ GTL R+LMFFMRDLYIAYD
Sbjct: 681  ESYIPYAVVENSFLMGLNPLECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYD 740

Query: 1765 GTVRNCYGNQLVQFSYNSKNAPGQSKSLLDKAEC-----GAPVGSLAACAISEAAYGALD 1929
            GTVRN YGNQLVQFSYN ++    S   +++  C     G PVGS++ACAISEAAY ALD
Sbjct: 741  GTVRNAYGNQLVQFSYNIEHTSTPSDG-INEDTCAYDMGGQPVGSISACAISEAAYSALD 799

Query: 1930 QPVSALENSPLLNLKKVLECGVKKLSGNKTASLFLSQKLKRWNNGFEYGAIDVKNHXXXX 2109
            QP+S LE SPLLNLK+VLECG++K + ++T SLFLS+KL++  +GFEYGA++VKNH    
Sbjct: 800  QPISLLEPSPLLNLKRVLECGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKL 859

Query: 2110 XXXXXXXXXXIFYSPQTGKRARISPWVCYFGISKEVASRKQLRVQSIINALKYKCADKAS 2289
                      I +SPQ G +   SPWVC+F + +E+A ++ L+  SII+AL  KC    +
Sbjct: 860  LFSDIVSTVMIVFSPQNGSKTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARA 919

Query: 2290 FKKLKL 2307
              K+ L
Sbjct: 920  ESKINL 925


>ref|XP_016713417.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Gossypium hirsutum]
 ref|XP_016713418.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Gossypium hirsutum]
 ref|XP_016713420.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Gossypium hirsutum]
 ref|XP_016713421.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Gossypium hirsutum]
          Length = 1481

 Score =  783 bits (2021), Expect = 0.0
 Identities = 409/799 (51%), Positives = 536/799 (67%), Gaps = 30/799 (3%)
 Frame = +1

Query: 1    RTRAYRKMVAFRGTANELSTCVTDCIKLSKIRAEKPTIRDP------DSTEDNPSKMHGL 162
            RTR Y+K+V FRG ANELS+ V +C+K+SK+  EKP+  D          +D+ S M GL
Sbjct: 262  RTRVYKKLVDFRGLANELSSHVLECLKISKLHVEKPSTEDSALIAALKKNKDSASNMSGL 321

Query: 163  KYMKEVSLGKRTDFCFRLVCVGDPYIKLDEIGVPRDLAETMLVSEQLNSLNWERINASCG 342
            +YMK+V LGKR D CFR+V  G+P +KL EIG+P  +AE + ++EQLN  N ER+   C 
Sbjct: 322  RYMKDVILGKRNDHCFRMVLTGNPNLKLSEIGIPCHVAEKLQIAEQLNRWNEERLKTCCN 381

Query: 343  LRILQKGETFIRRRGGLVPVRYGDQLRIGDTVYRPLHDGDIVLVNRPPSIHPHSLIALRV 522
            LRIL+KGE  IRR G LV +R+ +++++GDT+YRPL+DGD VL+NRPPSIH HSLIAL V
Sbjct: 382  LRILEKGEIRIRREGKLVRIRHNEKVQVGDTIYRPLNDGDTVLINRPPSIHQHSLIALSV 441

Query: 523  KVLPISCVLSYNPLVCDPFRGDFDGDSLHGYIPQSLESRAELRELVSLENQLVDKQSGKN 702
            KVLP++ V+S NPL+C PFRGDFDGD LHGY+PQS+ +R EL ELVSL+ QL++ QSG+N
Sbjct: 442  KVLPVNSVVSINPLICSPFRGDFDGDCLHGYVPQSINTRVELSELVSLDRQLINGQSGRN 501

Query: 703  LISLSHDSLTGAHLMLEDGVFFNRPQLQQLQMFCRRQKLELPAVMG----SSCLWTGRQL 870
            L+SLSHDSLT A+L+ EDGV  N  Q+QQL+MFC      LPA++     S+ +WTG+QL
Sbjct: 502  LLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMFCPNHS-PLPAIVKAPLLSNPVWTGKQL 560

Query: 871  FSLVLDKDFDANVA--ETQIKNGEFVSLLNPSACLQAGDDNIYSYLIRNFDGDEVLEFLH 1044
            FS++   +FD   A  +  I NG+ +     S  L+  D N++  LI+++ G ++L+FLH
Sbjct: 561  FSMLFPPEFDYVFAPSDVVIHNGDLICSSEGSTWLRDADGNLFQSLIKHYQG-KILDFLH 619

Query: 1045 SAQELMIEWLSSRGFSV--XXXXXXXXXXXKHNMNDEVLYGLYEAERQAHGQLLMVDGHQ 1218
            +AQE++ EWLS RG SV             + NM DE+ YGL EAE+  + + LMVD  Q
Sbjct: 620  AAQEVLCEWLSMRGLSVSLLDLYLSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQ 679

Query: 1219 DFLTGDLTGNMTKKEGYSGLDSDKMCYEQQTXXXXXXXXXXXFKQVFRDVQNLIYSYATR 1398
            DF    L GN  +   +  LD ++MCYE+Q            FKQVFRD+QNL+Y YA +
Sbjct: 680  DF----LAGNDEETNRFMVLDVEQMCYEKQRSAALSQASVDSFKQVFRDIQNLLYKYANK 735

Query: 1399 ENSFLSMLKAGSKGNMLKFVQHSMCVGYQHSLVPLSFQFPREFSCVSWNDHK------RA 1560
            +NS  +M KAGSKGN+LK VQHSMC+G QHSLVPLSF+FP + SC +WN+ K      + 
Sbjct: 736  DNSLFTMFKAGSKGNLLKLVQHSMCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKV 795

Query: 1561 DSSFSSGVDRYVPYGVIKSSFLSGLNPMELFVHSVTNRDASFGGHADISGTLFRKLMFFM 1740
            D +  S   +Y+PY V++SSF+ GLNP+E FVHSVT RD SF  +AD+ GTL R+LMFFM
Sbjct: 796  DDTDES-AKKYIPYAVVESSFVKGLNPLECFVHSVTTRDTSFSDNADLPGTLSRRLMFFM 854

Query: 1741 RDLYIAYDGTVRNCYGNQLVQFSYNSKNAPGQSKSLLDKAEC----------GAPVGSLA 1890
            RDL  AYDGTVRN YG+Q+VQF YN+        S  DK             G PVGSL+
Sbjct: 855  RDLCTAYDGTVRNAYGDQVVQFCYNTNKGRFSPTSCPDKLVSQGNSLPDGIGGQPVGSLS 914

Query: 1891 ACAISEAAYGALDQPVSALENSPLLNLKKVLECGVKKLSGNKTASLFLSQKLKRWNNGFE 2070
            ACAISEAAY ALDQP+S LE+SPLLNLK+VLECG K+ + ++T SLFLS KL    +G E
Sbjct: 915  ACAISEAAYSALDQPISLLESSPLLNLKRVLECGAKRGNADQTMSLFLSGKLVSRRHGQE 974

Query: 2071 YGAIDVKNHXXXXXXXXXXXXXXIFYSPQTGKRARISPWVCYFGISKEVASRKQLRVQSI 2250
            YGA++VKNH              I +SPQ     R SPWVC+F + K++  R++L V SI
Sbjct: 975  YGALEVKNHLERLIFRDIVSTVSIIFSPQMSSENRFSPWVCHFHVFKDIVKRRRLTVHSI 1034

Query: 2251 INALKYKCADKASFKKLKL 2307
            I+AL   C +     K+ L
Sbjct: 1035 IDALHMHCTNAKRLWKINL 1053