BLASTX nr result

ID: Chrysanthemum22_contig00017340 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00017340
         (679 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY83477.1| hypothetical protein LSAT_2X104941 [Lactuca sativa]     69   1e-11
gb|KVI09629.1| hypothetical protein Ccrd_011980 [Cynara carduncu...    64   8e-10

>gb|PLY83477.1| hypothetical protein LSAT_2X104941 [Lactuca sativa]
          Length = 76

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 41/80 (51%), Positives = 50/80 (62%)
 Frame = -3

Query: 482 MSRQGSNGGSWRTTEAAPLRLIRVERQSTMERKLPTIKEDESTIGDQGSQLQNYNGIXXX 303
           MSR   NGGS +T E+AP RLIRVER+ +ME+KL TIKEDE + GD   QLQN++G    
Sbjct: 1   MSRHAINGGSRQTVESAPPRLIRVERRPSMEKKLATIKEDECSSGD---QLQNFHG-NRA 56

Query: 302 XXXXXXXXXXXXXTEHYACN 243
                        T+HYACN
Sbjct: 57  VAFASSSSKTLNTTKHYACN 76


>gb|KVI09629.1| hypothetical protein Ccrd_011980 [Cynara cardunculus var. scolymus]
          Length = 103

 Score = 64.3 bits (155), Expect = 8e-10
 Identities = 41/84 (48%), Positives = 53/84 (63%)
 Frame = -3

Query: 494 SKKRMSRQGSNGGSWRTTEAAPLRLIRVERQSTMERKLPTIKEDESTIGDQGSQLQNYNG 315
           SKK MSR  S   S +T EAAP RLIRV+R++++E+KLPTIKEDE + GD   QLQ++NG
Sbjct: 30  SKKAMSRHSS---SRQTVEAAPPRLIRVDRRASLEKKLPTIKEDECSSGD---QLQSFNG 83

Query: 314 IXXXXXXXXXXXXXXXXTEHYACN 243
                            T+H+ACN
Sbjct: 84  ----NRTVSSSAKTLYSTKHHACN 103


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