BLASTX nr result

ID: Chrysanthemum22_contig00017316 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00017316
         (445 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023736009.1| DNA mismatch repair protein MSH7 [Lactuca sa...    70   6e-11
gb|PLY78825.1| hypothetical protein LSAT_8X160861 [Lactuca sativa]     56   3e-06

>ref|XP_023736009.1| DNA mismatch repair protein MSH7 [Lactuca sativa]
 gb|PLY72125.1| hypothetical protein LSAT_7X42200 [Lactuca sativa]
          Length = 1146

 Score = 69.7 bits (169), Expect = 6e-11
 Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 8/89 (8%)
 Frame = -2

Query: 327 DNSKRVKFSHDLSAEGKKDGVASEI----SKRVTFSLDSTAENKKPELSSD----NSKRG 172
           +NSKRVKFS DL A+ KKD VAS++    SKR   S D  +ENKK E++S+    N +  
Sbjct: 195 NNSKRVKFSQDLPAKNKKDEVASDMPMNNSKRANLSHDLLSENKKDEVASETPMNNKRSA 254

Query: 171 KFSYDLPDEIKKPELASDNIKRSKFFHNS 85
            FS+DLP + KK ++AS+   +  + H S
Sbjct: 255 YFSHDLPSQNKKDDVASETASKFDWLHPS 283



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 8/75 (10%)
 Frame = -2

Query: 201 ELSSDNSKRGKFSYDLPDEIKKPELASD----NIKRSKFFHNSSAEIKKPELSSD---NS 43
           + S +NSKR KFS DLP + KK E+ASD    N KR+   H+  +E KK E++S+   N+
Sbjct: 191 DFSINNSKRVKFSQDLPAKNKKDEVASDMPMNNSKRANLSHDLLSENKKDEVASETPMNN 250

Query: 42  KRSKYF-HDLPAEIK 1
           KRS YF HDLP++ K
Sbjct: 251 KRSAYFSHDLPSQNK 265


>gb|PLY78825.1| hypothetical protein LSAT_8X160861 [Lactuca sativa]
          Length = 351

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
 Frame = -2

Query: 327 DNSKRVKFSHDLSAEGKKDGVASEI----SKRVTFSLDSTAENKKPELS----SDNSKRG 172
           +NSKRVKFS DL A+ KKD VASE+    SKRV FS D  +ENKK E++     +N K+ 
Sbjct: 77  NNSKRVKFSQDLPAKNKKDEVASEMPMNNSKRVNFSHDLLSENKKYEVAFEMPMNNKKKY 136

Query: 171 KFSYDLPDEIKKPELASDNIKRSKFFHNSSAEIKKPELSSDN 46
           +  +   D     + A   +    + H+ +  +   +L  DN
Sbjct: 137 RKKHKTVDLKAIKKWARQILNGLHYLHSQNPPVIHRDLKCDN 178


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