BLASTX nr result
ID: Chrysanthemum22_contig00017106
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00017106
(370 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_023760644.1| U5 small nuclear ribonucleoprotein 40 kDa pr... 166 5e-48
gb|KVH91003.1| G-protein beta WD-40 repeat-containing protein [C... 165 7e-48
ref|XP_002277631.1| PREDICTED: U5 small nuclear ribonucleoprotei... 164 2e-47
gb|ACE96588.1| U5 snRNP-specific protein-like factor, partial [P... 159 1e-46
ref|XP_012075410.1| U5 small nuclear ribonucleoprotein 40 kDa pr... 161 3e-46
gb|ACE96604.1| U5 snRNP-specific protein-like factor, partial [P... 157 6e-46
gb|ACE96593.1| U5 snRNP-specific protein-like factor, partial [P... 157 6e-46
gb|ACE96587.1| U5 snRNP-specific protein-like factor, partial [P... 157 6e-46
gb|ACE96580.1| U5 snRNP-specific protein-like factor, partial [P... 157 6e-46
gb|ACE96577.1| U5 snRNP-specific protein-like factor, partial [P... 157 6e-46
ref|XP_011002877.1| PREDICTED: U5 small nuclear ribonucleoprotei... 159 8e-46
gb|OTG35852.1| putative transducin/WD40 repeat-like superfamily ... 159 1e-45
ref|XP_023915459.1| U5 small nuclear ribonucleoprotein 40 kDa pr... 159 2e-45
ref|XP_022039966.1| U5 small nuclear ribonucleoprotein 40 kDa pr... 159 2e-45
gb|KYP72717.1| U5 small nuclear ribonucleoprotein 40 kDa protein... 159 2e-45
ref|XP_021638276.1| U5 small nuclear ribonucleoprotein 40 kDa pr... 159 2e-45
ref|XP_011002876.1| PREDICTED: U5 small nuclear ribonucleoprotei... 159 2e-45
ref|XP_020207201.1| U5 small nuclear ribonucleoprotein 40 kDa pr... 159 3e-45
ref|XP_018840431.1| PREDICTED: U5 small nuclear ribonucleoprotei... 159 3e-45
gb|ACE96592.1| U5 snRNP-specific protein-like factor, partial [P... 155 3e-45
>ref|XP_023760644.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Lactuca sativa]
gb|PLY87878.1| hypothetical protein LSAT_0X9241 [Lactuca sativa]
Length = 337
Score = 166 bits (419), Expect = 5e-48
Identities = 84/145 (57%), Positives = 94/145 (64%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNR---------------------------------H 297
SCCPSRRGPPLV+SGSD + W+ +
Sbjct: 137 SCCPSRRGPPLVVSGSDDGTAKLWDLRQRGAIQTFPDKYQITAVGFSDASDKIYTGGIDN 196
Query: 296 CCQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
++WDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMD T WD+ YA NRC+K
Sbjct: 197 DVKIWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDSTLRIWDMRPYAPQNRCVK 256
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
I+EGHQHNVEQNLL C WSPDG+KV
Sbjct: 257 IMEGHQHNVEQNLLKCGWSPDGSKV 281
>gb|KVH91003.1| G-protein beta WD-40 repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 338
Score = 165 bits (418), Expect = 7e-48
Identities = 84/145 (57%), Positives = 94/145 (64%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNR---------------------------------H 297
SCCPSRRGPPLV+SGSD + W+ +
Sbjct: 138 SCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYXVXXVGFSDASDKIYSGGIDN 197
Query: 296 CCQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
+VWDLRRNEVTMTL+GHQNMITGMQLSPDGSYLLTNGMD T WD+ YA NRC+K
Sbjct: 198 DVKVWDLRRNEVTMTLQGHQNMITGMQLSPDGSYLLTNGMDCTLRIWDMRPYAPQNRCVK 257
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
I+EGHQHNVEQNLL C WSPDG+KV
Sbjct: 258 IMEGHQHNVEQNLLKCGWSPDGSKV 282
>ref|XP_002277631.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Vitis
vinifera]
Length = 344
Score = 164 bits (415), Expect = 2e-47
Identities = 82/145 (56%), Positives = 94/145 (64%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNR---------------------------------H 297
SCCPSRRGPPLV+SGSD + W+ +
Sbjct: 144 SCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDN 203
Query: 296 CCQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
+VWDLRRNEVTMTL+GHQ+MITGMQLSPDGSYLLTNGMD C WD+ YA NRC+K
Sbjct: 204 DVKVWDLRRNEVTMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVK 263
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
I+EGHQHN E+NLL CSWSPDG+KV
Sbjct: 264 ILEGHQHNFEKNLLKCSWSPDGSKV 288
>gb|ACE96588.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96589.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
Length = 215
Score = 159 bits (401), Expect = 1e-46
Identities = 81/145 (55%), Positives = 90/145 (62%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD----LQWWNRHC------------------------------- 294
SCCPSRRGPPLV+SGSD W RH
Sbjct: 58 SCCPSRRGPPLVVSGSDDGTSKLWDLRHKGAIQTFPDKYQITAVSFSDASDKIFTGGIDN 117
Query: 293 -CQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
+VWD+R+ EVTMTLEGHQ+MIT MQLSPDGSYLLTNGMD C WD+ YA NRC+K
Sbjct: 118 DVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLLTNGMDNKLCIWDMRPYAPQNRCVK 177
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
I EGHQHN E+NLL CSWSPDG+KV
Sbjct: 178 IFEGHQHNFEKNLLKCSWSPDGSKV 202
>ref|XP_012075410.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Jatropha curcas]
gb|KDP35149.1| hypothetical protein JCGZ_10683 [Jatropha curcas]
Length = 345
Score = 161 bits (408), Expect = 3e-46
Identities = 80/145 (55%), Positives = 93/145 (64%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNR---------------------------------H 297
SCCPSRRGPPLV+SGSD + W+ +
Sbjct: 145 SCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVGFSDASDKIFTGGIDN 204
Query: 296 CCQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
+VWDLR+NEVTM LEGHQ+MITGMQLSPDGSYLLTNGMD C WD+ YA NRC+K
Sbjct: 205 NVKVWDLRKNEVTMKLEGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVK 264
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
++EGHQHN E+NLL CSWSPDG+KV
Sbjct: 265 VLEGHQHNFEKNLLKCSWSPDGSKV 289
>gb|ACE96604.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
Length = 215
Score = 157 bits (396), Expect = 6e-46
Identities = 79/145 (54%), Positives = 91/145 (62%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNR---------------------------------H 297
SCCPSRRGPPLV+SGSD + W+ +
Sbjct: 58 SCCPSRRGPPLVVSGSDDGTSKLWDLRQKGAIQTFPDKYQITAVSFSDASDKIFTGGIDN 117
Query: 296 CCQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
+VWD+R+ EVTMTLEGHQ+MIT MQLSPDGSYLLTNGMD C WD+ YA NRC+K
Sbjct: 118 DVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLLTNGMDNKLCIWDMRPYAPQNRCVK 177
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
I EGHQHN E+NLL CSWSPDG+KV
Sbjct: 178 IFEGHQHNFEKNLLKCSWSPDGSKV 202
>gb|ACE96593.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
Length = 215
Score = 157 bits (396), Expect = 6e-46
Identities = 79/145 (54%), Positives = 91/145 (62%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNR---------------------------------H 297
SCCPSRRGPPLV+SGSD + W+ +
Sbjct: 58 SCCPSRRGPPLVVSGSDDGTSKLWDLRQKGAIQTFPDKYQITAVSFSDASDKIFTGGIYN 117
Query: 296 CCQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
+VWD+R+ EVTMTLEGHQ+MIT MQLSPDGSYLLTNGMD C WD+ YA NRC+K
Sbjct: 118 DVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLLTNGMDNKLCIWDMRPYAPQNRCVK 177
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
I EGHQHN E+NLL CSWSPDG+KV
Sbjct: 178 IFEGHQHNFEKNLLKCSWSPDGSKV 202
>gb|ACE96587.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
Length = 215
Score = 157 bits (396), Expect = 6e-46
Identities = 79/145 (54%), Positives = 91/145 (62%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNR---------------------------------H 297
SCCPSRRGPPLV+SGSD + W+ +
Sbjct: 58 SCCPSRRGPPLVVSGSDDGTSKLWDLRQKGAIQTFPDKYQITAVSFSDASDKIFTGGIDN 117
Query: 296 CCQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
+VWD+R+ EVTMTLEGHQ+MIT MQLSPDGSYLLTNGMD C WD+ YA NRC+K
Sbjct: 118 DVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLLTNGMDNKLCIWDMRPYAPQNRCVK 177
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
I EGHQHN E+NLL CSWSPDG+KV
Sbjct: 178 IFEGHQHNFEKNLLKCSWSPDGSKV 202
>gb|ACE96580.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96581.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96582.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96583.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96584.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96586.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96590.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96594.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96597.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96598.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96599.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96600.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96601.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96602.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96603.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96605.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96606.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96607.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96608.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
Length = 215
Score = 157 bits (396), Expect = 6e-46
Identities = 79/145 (54%), Positives = 91/145 (62%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNR---------------------------------H 297
SCCPSRRGPPLV+SGSD + W+ +
Sbjct: 58 SCCPSRRGPPLVVSGSDDGTSKLWDLRQKGAIQTFPDKYQITAVSFSDASDKIFTGGIDN 117
Query: 296 CCQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
+VWD+R+ EVTMTLEGHQ+MIT MQLSPDGSYLLTNGMD C WD+ YA NRC+K
Sbjct: 118 DVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLLTNGMDNKLCIWDMRPYAPQNRCVK 177
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
I EGHQHN E+NLL CSWSPDG+KV
Sbjct: 178 IFEGHQHNFEKNLLKCSWSPDGSKV 202
>gb|ACE96577.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96579.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
Length = 215
Score = 157 bits (396), Expect = 6e-46
Identities = 79/145 (54%), Positives = 91/145 (62%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNR---------------------------------H 297
SCCPSRRGPPLV+SGSD + W+ +
Sbjct: 58 SCCPSRRGPPLVVSGSDDGTSKLWDLRQKGAIQTFPDKYQITAVSFSDASDKIFTGGIDN 117
Query: 296 CCQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
+VWD+R+ EVTMTLEGHQ+MIT MQLSPDGSYLLTNGMD C WD+ YA NRC+K
Sbjct: 118 DVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLLTNGMDNKLCIWDMRPYAPQNRCVK 177
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
I EGHQHN E+NLL CSWSPDG+KV
Sbjct: 178 IFEGHQHNFEKNLLKCSWSPDGSKV 202
>ref|XP_011002877.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein
isoform X2 [Populus euphratica]
Length = 304
Score = 159 bits (402), Expect = 8e-46
Identities = 80/145 (55%), Positives = 92/145 (63%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNR---------------------------------H 297
SCCPSRRGPPLV+SGSD + W+ +
Sbjct: 145 SCCPSRRGPPLVVSGSDDGTSKLWDLRQKGAIQTFPDKYQITAVSFSDASDKIFTGGIDN 204
Query: 296 CCQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
+VWD+R+ EVTMTLEGHQ+MITGMQLSPDGSYLLTNGMD C WD+ YA NRC+K
Sbjct: 205 DVKVWDIRKGEVTMTLEGHQDMITGMQLSPDGSYLLTNGMDNKLCIWDMRPYAPQNRCVK 264
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
I EGHQHN E+NLL CSWSPDG+KV
Sbjct: 265 IFEGHQHNFEKNLLKCSWSPDGSKV 289
>gb|OTG35852.1| putative transducin/WD40 repeat-like superfamily protein
[Helianthus annuus]
Length = 325
Score = 159 bits (402), Expect = 1e-45
Identities = 83/145 (57%), Positives = 92/145 (63%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNR---------------------------------H 297
SC PSRRGPPLV+SGSD + W+ +
Sbjct: 125 SCSPSRRGPPLVVSGSDDGTAKLWDLRQRGAIQTFPDKYQITAVAFSDASDKIYSGGIDN 184
Query: 296 CCQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
+VWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTN MD T WD+ YA NRC+K
Sbjct: 185 VVKVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNAMDCTLRIWDMRPYAPQNRCVK 244
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
I+EGHQHNVEQNLL CSWS DG+KV
Sbjct: 245 IMEGHQHNVEQNLLKCSWSSDGSKV 269
>ref|XP_023915459.1| U5 small nuclear ribonucleoprotein 40 kDa protein-like [Quercus
suber]
gb|POF06733.1| u5 small nuclear ribonucleoprotein 40 kda protein [Quercus suber]
Length = 345
Score = 159 bits (403), Expect = 2e-45
Identities = 79/145 (54%), Positives = 92/145 (63%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNRHC-------------------------------- 294
SCCPSRRGPPLV+SGSD + W+
Sbjct: 145 SCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVGFSDASDKIFTGGIDN 204
Query: 293 -CQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
+VWDLR+ EVTMTL+GHQ+MITGMQLSPDGSYLLTNGMD C WD+ YA NRC+K
Sbjct: 205 EVKVWDLRKGEVTMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVK 264
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
++EGHQHN E+NLL CSWSPDG+KV
Sbjct: 265 VMEGHQHNFEKNLLKCSWSPDGSKV 289
>ref|XP_022039966.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Helianthus
annuus]
Length = 340
Score = 159 bits (402), Expect = 2e-45
Identities = 83/145 (57%), Positives = 92/145 (63%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNR---------------------------------H 297
SC PSRRGPPLV+SGSD + W+ +
Sbjct: 140 SCSPSRRGPPLVVSGSDDGTAKLWDLRQRGAIQTFPDKYQITAVAFSDASDKIYSGGIDN 199
Query: 296 CCQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
+VWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTN MD T WD+ YA NRC+K
Sbjct: 200 VVKVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNAMDCTLRIWDMRPYAPQNRCVK 259
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
I+EGHQHNVEQNLL CSWS DG+KV
Sbjct: 260 IMEGHQHNVEQNLLKCSWSSDGSKV 284
>gb|KYP72717.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Cajanus cajan]
Length = 326
Score = 159 bits (401), Expect = 2e-45
Identities = 77/145 (53%), Positives = 93/145 (64%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNR---------------------------------H 297
+CCPSRRGPPLV+SGSD + W+ +
Sbjct: 126 ACCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFPDKYQITAVGFSDASDKIFTGGIDN 185
Query: 296 CCQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
++WDLR+ EVTMTL+GHQ+MITGMQLSPDGSYLLTNGMD C WD+ YA NRC+K
Sbjct: 186 DVKIWDLRKGEVTMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVK 245
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
++EGHQHN E+NLL CSWSPDG+KV
Sbjct: 246 VLEGHQHNFEKNLLKCSWSPDGSKV 270
>ref|XP_021638276.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Hevea
brasiliensis]
ref|XP_021657493.1| U5 small nuclear ribonucleoprotein 40 kDa protein-like [Hevea
brasiliensis]
Length = 345
Score = 159 bits (402), Expect = 2e-45
Identities = 79/145 (54%), Positives = 92/145 (63%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNR---------------------------------H 297
SCCPSRRGPPLV+SGSD + W+ +
Sbjct: 145 SCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDN 204
Query: 296 CCQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
+VWDLR+ EVTM LEGHQ+MITGMQLSPDGSYLLTNGMD C WD+ YA NRC+K
Sbjct: 205 DVKVWDLRKGEVTMKLEGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVK 264
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
++EGHQHN E+NLL CSWSPDG+KV
Sbjct: 265 VLEGHQHNFEKNLLKCSWSPDGSKV 289
>ref|XP_011002876.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein
isoform X1 [Populus euphratica]
Length = 345
Score = 159 bits (402), Expect = 2e-45
Identities = 80/145 (55%), Positives = 92/145 (63%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNR---------------------------------H 297
SCCPSRRGPPLV+SGSD + W+ +
Sbjct: 145 SCCPSRRGPPLVVSGSDDGTSKLWDLRQKGAIQTFPDKYQITAVSFSDASDKIFTGGIDN 204
Query: 296 CCQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
+VWD+R+ EVTMTLEGHQ+MITGMQLSPDGSYLLTNGMD C WD+ YA NRC+K
Sbjct: 205 DVKVWDIRKGEVTMTLEGHQDMITGMQLSPDGSYLLTNGMDNKLCIWDMRPYAPQNRCVK 264
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
I EGHQHN E+NLL CSWSPDG+KV
Sbjct: 265 IFEGHQHNFEKNLLKCSWSPDGSKV 289
>ref|XP_020207201.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Cajanus cajan]
Length = 345
Score = 159 bits (401), Expect = 3e-45
Identities = 77/145 (53%), Positives = 93/145 (64%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNR---------------------------------H 297
+CCPSRRGPPLV+SGSD + W+ +
Sbjct: 145 ACCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFPDKYQITAVGFSDASDKIFTGGIDN 204
Query: 296 CCQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
++WDLR+ EVTMTL+GHQ+MITGMQLSPDGSYLLTNGMD C WD+ YA NRC+K
Sbjct: 205 DVKIWDLRKGEVTMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVK 264
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
++EGHQHN E+NLL CSWSPDG+KV
Sbjct: 265 VLEGHQHNFEKNLLKCSWSPDGSKV 289
>ref|XP_018840431.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
[Juglans regia]
ref|XP_018840432.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
[Juglans regia]
Length = 345
Score = 159 bits (401), Expect = 3e-45
Identities = 78/145 (53%), Positives = 92/145 (63%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNR---------------------------------H 297
SCCPSRRGPPLV+SGSD + W+ +
Sbjct: 145 SCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDN 204
Query: 296 CCQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
+VWDLR+ EVTMTL+GHQ+MITGMQLSPDGSYLLTNGMD C WD+ YA NRC+K
Sbjct: 205 DIKVWDLRKGEVTMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVK 264
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
++EGHQHN E+NLL C WSPDG+KV
Sbjct: 265 VLEGHQHNFEKNLLKCGWSPDGSKV 289
>gb|ACE96592.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
gb|ACE96596.1| U5 snRNP-specific protein-like factor, partial [Populus tremula]
Length = 215
Score = 155 bits (391), Expect = 3e-45
Identities = 78/145 (53%), Positives = 91/145 (62%), Gaps = 36/145 (24%)
Frame = -3
Query: 368 SCCPSRRGPPLVISGSD---LQWWNR---------------------------------H 297
SCCPSRRGPPLV+SGSD + W+ +
Sbjct: 58 SCCPSRRGPPLVVSGSDDGTSKLWDLRQKGAIQTFPDKYQITAVSFSDASDKIFTGGIDN 117
Query: 296 CCQVWDLRRNEVTMTLEGHQNMITGMQLSPDGSYLLTNGMDFTFCTWDLCSYASHNRCIK 117
+VWD+R+ EVTMTLEGHQ+MIT MQLSPDGSYLLTNGMD C WD+ YA NRC+K
Sbjct: 118 DVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLLTNGMDNKLCIWDMRPYAPQNRCVK 177
Query: 116 IIEGHQHNVEQNLLDCSWSPDGNKV 42
I EGHQHN E++LL CSWSPDG+KV
Sbjct: 178 IFEGHQHNFEKHLLKCSWSPDGSKV 202