BLASTX nr result
ID: Chrysanthemum22_contig00017060
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00017060
(493 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_022009434.1| small RNA-binding protein 11, chloroplastic-... 73 3e-13
gb|OTF97781.1| putative RNA recognition motif domain, Nucleotide... 73 6e-13
gb|KVI08308.1| Nucleotide-binding, alpha-beta plait [Cynara card... 72 8e-13
ref|XP_022007722.1| small RNA-binding protein 11, chloroplastic-... 63 2e-09
ref|XP_023736791.1| small RNA-binding protein 11, chloroplastic-... 62 3e-09
ref|XP_019254531.1| PREDICTED: glycine-rich RNA-binding protein ... 62 1e-08
gb|OIS97851.1| glycine-rich rna-binding protein 4, mitochondrial... 62 1e-08
ref|XP_002530529.1| PREDICTED: glycine-rich RNA-binding protein ... 59 6e-08
ref|XP_009601004.1| PREDICTED: glycine-rich RNA-binding protein ... 58 1e-07
ref|XP_018835303.1| PREDICTED: glycine-rich RNA-binding protein ... 57 2e-07
ref|XP_009767268.1| PREDICTED: glycine-rich RNA-binding protein ... 57 2e-07
ref|XP_018835298.1| PREDICTED: glycine-rich RNA-binding protein ... 57 3e-07
ref|XP_021622464.1| small RNA-binding protein 11, chloroplastic-... 57 4e-07
ref|XP_011046925.1| PREDICTED: glycine-rich RNA-binding protein ... 57 4e-07
ref|XP_016509759.1| PREDICTED: glycine-rich RNA-binding protein ... 56 5e-07
ref|XP_006387726.1| RNA-binding family protein [Populus trichoca... 56 6e-07
gb|PKI49365.1| hypothetical protein CRG98_030293 [Punica granatum] 55 1e-06
ref|XP_006481719.1| PREDICTED: glycine-rich RNA-binding protein ... 55 1e-06
ref|XP_006430133.1| small RNA-binding protein 11, chloroplastic ... 55 1e-06
gb|KDO39061.1| hypothetical protein CISIN_1g032812mg [Citrus sin... 55 1e-06
>ref|XP_022009434.1| small RNA-binding protein 11, chloroplastic-like [Helianthus
annuus]
Length = 143
Score = 72.8 bits (177), Expect = 3e-13
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPEPPTAEQ 129
I+EMDGKTLHGR+I VELAKPRT G+PIARGPPEPPT +Q
Sbjct: 101 ISEMDGKTLHGRIITVELAKPRTKHTGGMPIARGPPEPPTEKQ 143
>gb|OTF97781.1| putative RNA recognition motif domain, Nucleotide-binding
alpha-beta plait domain protein [Helianthus annuus]
Length = 170
Score = 72.8 bits (177), Expect = 6e-13
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPEPPTAEQ 129
I+EMDGKTLHGR+I VELAKPRT G+PIARGPPEPPT +Q
Sbjct: 128 ISEMDGKTLHGRIITVELAKPRTKHTGGMPIARGPPEPPTEKQ 170
>gb|KVI08308.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 143
Score = 71.6 bits (174), Expect = 8e-13
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPEPPTAEQ 129
INEM+GK LHGR+ICVELAKPR +GVPIARGPPEPP +Q
Sbjct: 101 INEMNGKPLHGRIICVELAKPRRSKGSGVPIARGPPEPPKEQQ 143
>ref|XP_022007722.1| small RNA-binding protein 11, chloroplastic-like [Helianthus
annuus]
Length = 148
Score = 62.8 bits (151), Expect = 2e-09
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPEPPTAEQ 129
I+EMDGKTLHGR+I VELAKP+T G+ +ARGPP+P T +Q
Sbjct: 106 ISEMDGKTLHGRIITVELAKPQTKHTGGMSLARGPPDPHTEKQ 148
>ref|XP_023736791.1| small RNA-binding protein 11, chloroplastic-like [Lactuca sativa]
gb|PLY71499.1| hypothetical protein LSAT_2X56381 [Lactuca sativa]
Length = 147
Score = 62.4 bits (150), Expect = 3e-09
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPEPPTAEQ 129
INEMD K LHGRVI VELAKPR P ++ PIARGPPEPPT Q
Sbjct: 106 INEMDQKPLHGRVIHVELAKPRRPYSS-APIARGPPEPPTDVQ 147
>ref|XP_019254531.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Nicotiana attenuata]
Length = 177
Score = 61.6 bits (148), Expect = 1e-08
Identities = 27/44 (61%), Positives = 34/44 (77%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPEPPTAEQV 132
+ EM+GK L+GRVI V+ AKP+ G+PIARGPPEPPT +QV
Sbjct: 108 LQEMNGKPLNGRVIFVDYAKPKADFGGGMPIARGPPEPPTEQQV 151
>gb|OIS97851.1| glycine-rich rna-binding protein 4, mitochondrial [Nicotiana
attenuata]
Length = 189
Score = 61.6 bits (148), Expect = 1e-08
Identities = 27/44 (61%), Positives = 34/44 (77%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPEPPTAEQV 132
+ EM+GK L+GRVI V+ AKP+ G+PIARGPPEPPT +QV
Sbjct: 120 LQEMNGKPLNGRVIFVDYAKPKADFGGGMPIARGPPEPPTEQQV 163
>ref|XP_002530529.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Ricinus communis]
gb|EEF31861.1| RNA binding protein, putative [Ricinus communis]
Length = 127
Score = 58.5 bits (140), Expect = 6e-08
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPEP 114
++EM+GKTL+GRVI V+ AKPRT N VPIARGPPEP
Sbjct: 89 LSEMNGKTLNGRVIYVDYAKPRTDSRNEVPIARGPPEP 126
>ref|XP_009601004.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Nicotiana tomentosiformis]
Length = 129
Score = 57.8 bits (138), Expect = 1e-07
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPEPPT 120
+ EM+GK L+GRVI V+ AKP+ G+PIARGPPEPPT
Sbjct: 88 LQEMNGKPLNGRVIFVDYAKPKADFGGGMPIARGPPEPPT 127
>ref|XP_018835303.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Juglans regia]
Length = 133
Score = 57.4 bits (137), Expect = 2e-07
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPEPPTAE 126
I EM+GKTL+GRV+ V+ AKP++ G+PIARGPPEP A+
Sbjct: 91 ITEMNGKTLNGRVVFVDYAKPKSDFGGGMPIARGPPEPIVAD 132
>ref|XP_009767268.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Nicotiana sylvestris]
ref|XP_016474097.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Nicotiana tabacum]
Length = 129
Score = 57.0 bits (136), Expect = 2e-07
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPEPP 117
+ EM+GK L+GRVI V+ AKP+ GVPIARGPPEPP
Sbjct: 88 LQEMNGKPLNGRVIFVDYAKPKADFGGGVPIARGPPEPP 126
>ref|XP_018835298.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like,
partial [Juglans regia]
Length = 131
Score = 56.6 bits (135), Expect = 3e-07
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPEPPTA 123
I EM+GKTL+GRV+ V+ AKP++ G+PIARGPPEP A
Sbjct: 91 ITEMNGKTLNGRVVFVDYAKPKSDFGGGMPIARGPPEPIVA 131
>ref|XP_021622464.1| small RNA-binding protein 11, chloroplastic-like [Manihot
esculenta]
gb|OAY40822.1| hypothetical protein MANES_09G051700 [Manihot esculenta]
Length = 150
Score = 57.0 bits (136), Expect = 4e-07
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPEP 114
+ EM+GKTL+GRVI VE+AKPRT +PIARGPPEP
Sbjct: 90 LGEMNGKTLNGRVIFVEVAKPRTGFRGELPIARGPPEP 127
>ref|XP_011046925.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Populus euphratica]
ref|XP_011004186.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Populus euphratica]
Length = 139
Score = 56.6 bits (135), Expect = 4e-07
Identities = 25/42 (59%), Positives = 34/42 (80%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPEPPTAE 126
++EM+GK+L+GRVI V+ AK +T G+PIARGPPEP T+E
Sbjct: 97 LDEMNGKSLNGRVIYVDYAKLKTNFGGGIPIARGPPEPTTSE 138
>ref|XP_016509759.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Nicotiana tabacum]
Length = 129
Score = 56.2 bits (134), Expect = 5e-07
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPEPPT 120
+ EM+GK L+GRVI V+ AKP+ G+PI RGPPEPPT
Sbjct: 88 LQEMNGKPLNGRVIFVDYAKPKADFGGGMPITRGPPEPPT 127
>ref|XP_006387726.1| RNA-binding family protein [Populus trichocarpa]
gb|PNT32791.1| hypothetical protein POPTR_006G208500v3 [Populus trichocarpa]
gb|PNT32792.1| hypothetical protein POPTR_006G208500v3 [Populus trichocarpa]
Length = 139
Score = 56.2 bits (134), Expect = 6e-07
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPEPPTAE 126
++EM+GK L+GRVI V+ AK +T G+PIARGPPEP T+E
Sbjct: 97 LDEMNGKALNGRVIYVDYAKLKTNFGGGIPIARGPPEPTTSE 138
>gb|PKI49365.1| hypothetical protein CRG98_030293 [Punica granatum]
Length = 110
Score = 54.7 bits (130), Expect = 1e-06
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPEP 114
+ EM+GKTL+GR+I V+ AKPR G+PIARGPPEP
Sbjct: 68 VTEMNGKTLNGRMIFVDYAKPRAGSGGGMPIARGPPEP 105
>ref|XP_006481719.1| PREDICTED: glycine-rich RNA-binding protein RZ1A isoform X2 [Citrus
sinensis]
Length = 131
Score = 55.1 bits (131), Expect = 1e-06
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPE 111
++EM+GKTL GRVI V+ AKP+T +G+PIARGPPE
Sbjct: 75 LSEMNGKTLDGRVIIVDYAKPKTSFRSGMPIARGPPE 111
>ref|XP_006430133.1| small RNA-binding protein 11, chloroplastic isoform X2 [Citrus
clementina]
gb|ESR43373.1| hypothetical protein CICLE_v10012994mg [Citrus clementina]
Length = 131
Score = 55.1 bits (131), Expect = 1e-06
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPE 111
++EM+GKTL GRVI V+ AKP+T +G+PIARGPPE
Sbjct: 75 LSEMNGKTLDGRVIVVDYAKPKTSFRSGMPIARGPPE 111
>gb|KDO39061.1| hypothetical protein CISIN_1g032812mg [Citrus sinensis]
Length = 133
Score = 55.1 bits (131), Expect = 1e-06
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +1
Query: 1 INEMDGKTLHGRVICVELAKPRTPINNGVPIARGPPE 111
++EM+GKTL GRVI V+ AKP+T +G+PIARGPPE
Sbjct: 77 LSEMNGKTLDGRVIVVDYAKPKTSFRSGMPIARGPPE 113