BLASTX nr result

ID: Chrysanthemum22_contig00016970 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00016970
         (359 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023755742.1| uncharacterized protein LOC111904192, partia...    79   4e-15
gb|PLY91565.1| hypothetical protein LSAT_1X9061 [Lactuca sativa]       79   5e-15
ref|XP_021989649.1| uncharacterized protein LOC110886191 [Helian...    60   3e-08

>ref|XP_023755742.1| uncharacterized protein LOC111904192, partial [Lactuca sativa]
          Length = 281

 Score = 79.0 bits (193), Expect = 4e-15
 Identities = 41/75 (54%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
 Frame = +1

Query: 1   RNGSTNHNKGLFINMFFPFSVGXXXXXXXXXXXXXFGKDS-----IKYSPKPELFDKS-- 159
           +NGS NHNKGL INMFFPF++G             FG  S     +K+SPKPEL DKS  
Sbjct: 188 KNGSINHNKGLMINMFFPFTIG-SKKRSSIRTSTSFGNSSNHGAGVKFSPKPELLDKSAG 246

Query: 160 -GGDRRDWWWKKYTG 201
            GGD RD WWKK+TG
Sbjct: 247 GGGDSRDRWWKKFTG 261


>gb|PLY91565.1| hypothetical protein LSAT_1X9061 [Lactuca sativa]
          Length = 303

 Score = 79.0 bits (193), Expect = 5e-15
 Identities = 41/75 (54%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
 Frame = +1

Query: 1   RNGSTNHNKGLFINMFFPFSVGXXXXXXXXXXXXXFGKDS-----IKYSPKPELFDKS-- 159
           +NGS NHNKGL INMFFPF++G             FG  S     +K+SPKPEL DKS  
Sbjct: 188 KNGSINHNKGLMINMFFPFTIG-SKKRSSIRTSTSFGNSSNHGAGVKFSPKPELLDKSAG 246

Query: 160 -GGDRRDWWWKKYTG 201
            GGD RD WWKK+TG
Sbjct: 247 GGGDSRDRWWKKFTG 261


>ref|XP_021989649.1| uncharacterized protein LOC110886191 [Helianthus annuus]
 gb|OTG12388.1| hypothetical protein HannXRQ_Chr10g0309091 [Helianthus annuus]
          Length = 288

 Score = 60.5 bits (145), Expect = 3e-08
 Identities = 41/129 (31%), Positives = 53/129 (41%), Gaps = 10/129 (7%)
 Frame = +1

Query: 1   RNGSTN--HNKGLFINMFFPFSVGXXXXXXXXXXXXXFGKDS----IKYSPKPELFDKSG 162
           +NGS N  HN GL INMF PFS+G             +   +    +K SP  +L +KSG
Sbjct: 155 KNGSMNRNHNSGLLINMFLPFSIGSKKKKTIRTNSYSYRNGNNVAGVKSSPTADLLEKSG 214

Query: 163 -GDRRDWWWKKYTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN---RKNNDC 330
            GDRR+ WWKK+T                                     N   R+ + C
Sbjct: 215 DGDRRE-WWKKFTDSGYSEGSGVTSSSGGESTGRSGSSGSSGSSTAGSLRNNSDRRKDGC 273

Query: 331 SYGCWSFFP 357
           + GCWS FP
Sbjct: 274 TSGCWSLFP 282


Top