BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00016907
         (419 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79492.1|AC022492_36 F1L3.2 [Arabidopsis thaliana]                53   5e-06
ref|NP_849806.1| oligouridylate-binding protein 1A [Arabidopsis ...    53   7e-06

>gb|AAF79492.1|AC022492_36 F1L3.2 [Arabidopsis thaliana]
          Length = 575

 Score = 53.1 bits (126), Expect(2) = 5e-06
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = +2

Query: 323 LLLICFRDAQVMLDQKTGRSRGFGFVSFRNQQ 418
           + ++C RDA+VM DQKTGRSRGFGFVSFRNQQ
Sbjct: 267 IAIVC-RDARVMWDQKTGRSRGFGFVSFRNQQ 297



 Score = 24.6 bits (52), Expect(2) = 5e-06
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 214 HFDIFVGDLSTRIFVCLL 267
           HF+IFVGDLS  +   +L
Sbjct: 231 HFNIFVGDLSPEVTDAML 248


>ref|NP_849806.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
 gb|AEE33044.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
          Length = 430

 Score = 53.1 bits (126), Expect(2) = 7e-06
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +2

Query: 338 FRDAQVMLDQKTGRSRGFGFVSFRNQQ 418
           +RDA+VM DQKTGRSRGFGFVSFRNQQ
Sbjct: 178 YRDARVMWDQKTGRSRGFGFVSFRNQQ 204



 Score = 24.3 bits (51), Expect(2) = 7e-06
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 214 HFDIFVGDLSTRI 252
           HF+IFVGDLS  +
Sbjct: 147 HFNIFVGDLSPEV 159