BLASTX nr result

ID: Chrysanthemum22_contig00016646 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00016646
         (502 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023767571.1| uncharacterized protein LOC111916170 [Lactuc...    61   1e-08

>ref|XP_023767571.1| uncharacterized protein LOC111916170 [Lactuca sativa]
          Length = 172

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 41/117 (35%), Positives = 57/117 (48%)
 Frame = -3

Query: 494 DDIAATVQQHTIVAFIRSYETTFHGQAEMKVSVINAYKLDERPTPNLISLQPEKQASQST 315
           +DIAA ++   +VAF+R Y   FHG  EMKVS++ AYK DE P PN+  + P      S 
Sbjct: 60  NDIAAALELSEVVAFVRLYVICFHGVKEMKVSIVKAYKGDENPNPNITIVLP-----NSP 114

Query: 314 SPDVNPSITSLPEKESAEPVAKPPTDKGK*LFTPSTKLVLEEISSTIESKSVKRSLP 144
           SP +N  +                   G  +  P+T     +++ST  SKSV   LP
Sbjct: 115 SPTLNKHLV---------------ISVGSTISAPTTH--FPDVTSTCCSKSVTTLLP 154


Top