BLASTX nr result
ID: Chrysanthemum22_contig00016599
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00016599
(371 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KVI10688.1| Nucleotide-binding, alpha-beta plait, partial [Cy... 100 8e-22
ref|XP_022018497.1| RNA-binding protein 28 isoform X2 [Helianthu... 62 2e-08
ref|XP_022018496.1| RNA-binding protein 28 isoform X1 [Helianthu... 62 2e-08
gb|PLY71225.1| hypothetical protein LSAT_6X14381 [Lactuca sativa] 57 9e-07
ref|XP_023737151.1| RNA-binding protein 28-like [Lactuca sativa] 57 1e-06
ref|XP_023770445.1| RNA-binding protein 28 isoform X2 [Lactuca s... 57 1e-06
ref|XP_023770444.1| RNA-binding protein 28 isoform X1 [Lactuca s... 57 1e-06
gb|PLY80355.1| hypothetical protein LSAT_7X91680 [Lactuca sativa] 57 1e-06
>gb|KVI10688.1| Nucleotide-binding, alpha-beta plait, partial [Cynara cardunculus
var. scolymus]
Length = 931
Score = 99.8 bits (247), Expect = 8e-22
Identities = 54/102 (52%), Positives = 64/102 (62%), Gaps = 7/102 (6%)
Frame = +1
Query: 85 LDKNKNTQHXXXXXXXXXXXXIVDDEVNFDEEADVAKKVLNNFLSS-------VNNDPVP 243
++ +KNTQH V++EVNFDEEADVAKKVLNNFLSS VN D +
Sbjct: 385 VELDKNTQHSHGAAVVPDGSDSVEEEVNFDEEADVAKKVLNNFLSSLNEPTASVNGDIIL 444
Query: 244 VQRKPDDETVKTQTKISDVPTDAQHVSKPESLPKTDNIKSKP 369
QRK D+ET+ K+SD PT HVSKPESL KT+N KP
Sbjct: 445 PQRKQDEETINVHNKLSDGPTTVPHVSKPESLTKTENTNFKP 486
>ref|XP_022018497.1| RNA-binding protein 28 isoform X2 [Helianthus annuus]
Length = 982
Score = 61.6 bits (148), Expect = 2e-08
Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Frame = +1
Query: 82 KLDKNKNTQHXXXXXXXXXXXX-IVDDEVNFDEEADVAKKVLNNFLSSVNN--------D 234
+++ +KNTQH +V +EVNFDEEADVA+KVLNNFLSS N +
Sbjct: 464 RVETDKNTQHSNKDADVSDDDPDLVKEEVNFDEEADVARKVLNNFLSSNENVASAKQGDE 523
Query: 235 PVPVQRKPDDETVKTQTKISDVPTDAQHVSKPESLPKTDNIKSKP 369
V V K + KT+T T+ + V E L +T I + P
Sbjct: 524 SVDVNNKISESLTKTETSTKSEKTNFKTVETEEELERTLFISNLP 568
>ref|XP_022018496.1| RNA-binding protein 28 isoform X1 [Helianthus annuus]
gb|OTF90935.1| putative RNA-binding (RRM/RBD/RNP motifs) family protein
[Helianthus annuus]
Length = 1019
Score = 61.6 bits (148), Expect = 2e-08
Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Frame = +1
Query: 82 KLDKNKNTQHXXXXXXXXXXXX-IVDDEVNFDEEADVAKKVLNNFLSSVNN--------D 234
+++ +KNTQH +V +EVNFDEEADVA+KVLNNFLSS N +
Sbjct: 501 RVETDKNTQHSNKDADVSDDDPDLVKEEVNFDEEADVARKVLNNFLSSNENVASAKQGDE 560
Query: 235 PVPVQRKPDDETVKTQTKISDVPTDAQHVSKPESLPKTDNIKSKP 369
V V K + KT+T T+ + V E L +T I + P
Sbjct: 561 SVDVNNKISESLTKTETSTKSEKTNFKTVETEEELERTLFISNLP 605
>gb|PLY71225.1| hypothetical protein LSAT_6X14381 [Lactuca sativa]
Length = 721
Score = 56.6 bits (135), Expect = 9e-07
Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Frame = +1
Query: 88 DKNKNTQHXXXXXXXXXXXXIVDDEVNFDEEADVAKKVLNNFLSSVNN--DPV------P 243
+ +KNT+H +EVNFDEEADV +KVLNNFLSS N DPV P
Sbjct: 331 ETDKNTKHANVPEASNSD----SEEVNFDEEADVTQKVLNNFLSSSNEPMDPVIDDHISP 386
Query: 244 VQRKPDDETVKTQTKISDVPTDAQHVSKPESLPK 345
+++ D+ KT T ++P VSKPE+ K
Sbjct: 387 QKKQKDEANNKTPTTPKNIPI----VSKPENSTK 416
>ref|XP_023737151.1| RNA-binding protein 28-like [Lactuca sativa]
Length = 824
Score = 56.6 bits (135), Expect = 1e-06
Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Frame = +1
Query: 88 DKNKNTQHXXXXXXXXXXXXIVDDEVNFDEEADVAKKVLNNFLSSVNN--DPV------P 243
+ +KNT+H +EVNFDEEADV +KVLNNFLSS N DPV P
Sbjct: 480 ETDKNTKHANVPEASNSD----SEEVNFDEEADVTQKVLNNFLSSSNEPMDPVIDDHISP 535
Query: 244 VQRKPDDETVKTQTKISDVPTDAQHVSKPESLPK 345
+++ D+ KT T ++P VSKPE+ K
Sbjct: 536 QKKQKDEANNKTPTTPKNIPI----VSKPENSTK 565
>ref|XP_023770445.1| RNA-binding protein 28 isoform X2 [Lactuca sativa]
Length = 961
Score = 56.6 bits (135), Expect = 1e-06
Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Frame = +1
Query: 88 DKNKNTQHXXXXXXXXXXXXIVDDEVNFDEEADVAKKVLNNFLSSVNN--DPV------P 243
+ +KNT+H +EVNFDEEADV +KVLNNFLSS N DPV P
Sbjct: 446 ETDKNTKHANVPEASNSD----SEEVNFDEEADVTQKVLNNFLSSSNEPMDPVIDDHISP 501
Query: 244 VQRKPDDETVKTQTKISDVPTDAQHVSKPESLPK 345
+++ D+ KT T ++P VSKPE+ K
Sbjct: 502 QKKQKDEANNKTPTTPKNIPI----VSKPENSTK 531
>ref|XP_023770444.1| RNA-binding protein 28 isoform X1 [Lactuca sativa]
Length = 998
Score = 56.6 bits (135), Expect = 1e-06
Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Frame = +1
Query: 88 DKNKNTQHXXXXXXXXXXXXIVDDEVNFDEEADVAKKVLNNFLSSVNN--DPV------P 243
+ +KNT+H +EVNFDEEADV +KVLNNFLSS N DPV P
Sbjct: 483 ETDKNTKHANVPEASNSD----SEEVNFDEEADVTQKVLNNFLSSSNEPMDPVIDDHISP 538
Query: 244 VQRKPDDETVKTQTKISDVPTDAQHVSKPESLPK 345
+++ D+ KT T ++P VSKPE+ K
Sbjct: 539 QKKQKDEANNKTPTTPKNIPI----VSKPENSTK 568
>gb|PLY80355.1| hypothetical protein LSAT_7X91680 [Lactuca sativa]
Length = 1002
Score = 56.6 bits (135), Expect = 1e-06
Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Frame = +1
Query: 88 DKNKNTQHXXXXXXXXXXXXIVDDEVNFDEEADVAKKVLNNFLSSVNN--DPV------P 243
+ +KNT+H +EVNFDEEADV +KVLNNFLSS N DPV P
Sbjct: 487 ETDKNTKHANVPEASNSD----SEEVNFDEEADVTQKVLNNFLSSSNEPMDPVIDDHISP 542
Query: 244 VQRKPDDETVKTQTKISDVPTDAQHVSKPESLPK 345
+++ D+ KT T ++P VSKPE+ K
Sbjct: 543 QKKQKDEANNKTPTTPKNIPI----VSKPENSTK 572