BLASTX nr result

ID: Chrysanthemum22_contig00016332 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00016332
         (441 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH92312.1| Nucleotide-binding, alpha-beta plait [Cynara card...    86   2e-16
ref|XP_021982863.1| nucleolin-like isoform X3 [Helianthus annuus]      82   3e-15
ref|XP_021982861.1| nucleolin-like isoform X1 [Helianthus annuus...    82   3e-15
ref|XP_021982862.1| nucleolin-like isoform X2 [Helianthus annuus]      79   4e-14
ref|XP_023746716.1| nucleolin-like isoform X2 [Lactuca sativa]         58   8e-07
ref|XP_023746715.1| nucleolin-like isoform X1 [Lactuca sativa] >...    58   8e-07

>gb|KVH92312.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
           scolymus]
          Length = 930

 Score = 85.5 bits (210), Expect = 2e-16
 Identities = 61/155 (39%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
 Frame = -3

Query: 433 TTPEPIVDAPKVEDETVKVTPGTKSGNXXXXXXXXXXXXXXXXXXAG----DSKTASASV 266
           TTPE  V+A KV+D+TVKVTPG K G                   A     D+KT  ASV
Sbjct: 66  TTPETPVEALKVQDDTVKVTPGKKPGTKRTVKRVVKRTVIRKKAPASAKSDDAKTQPASV 125

Query: 265 KAEEDDSEVPAEKESVEHVEEMKDAEPVKQEELSPNDEN---------DDVAVSQXXXXX 113
             E+DD+EVP EKE    ++E+KD    KQEELSP+D           DD  VSQ     
Sbjct: 126 AVEKDDTEVPVEKEV---IDEVKDVAYAKQEELSPSDVKKSVEKEEHVDDTGVSQKGDKD 182

Query: 112 XXXXXXXXXXXXXXXXVQPSVENVVGNSTQESSDV 8
                           VQPS+EN+  +  QESSD+
Sbjct: 183 VAEAEDNMKDVDESNDVQPSIENLESSLRQESSDI 217


>ref|XP_021982863.1| nucleolin-like isoform X3 [Helianthus annuus]
          Length = 917

 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 59/143 (41%), Positives = 70/143 (48%)
 Frame = -3

Query: 436 TTTPEPIVDAPKVEDETVKVTPGTKSGNXXXXXXXXXXXXXXXXXXAGDSKTASASVKAE 257
           TTTPE  V   KVED+TV VTPGTKSGN                  +G +    A V  E
Sbjct: 65  TTTPETPVAEVKVEDDTVNVTPGTKSGNKKTVKKVVKRTVIRKKPKSGGAGEPPALVSDE 124

Query: 256 EDDSEVPAEKESVEHVEEMKDAEPVKQEELSPNDENDDVAVSQXXXXXXXXXXXXXXXXX 77
           +  S VPAE+E  E +EE+KD   VKQEE S +D N D+ +S                  
Sbjct: 125 QGGSVVPAEQEQ-ERLEEVKDVVCVKQEESSVDDVN-DLGMSVEVVKDDVKTEDIMEDVE 182

Query: 76  XXXXVQPSVENVVGNSTQESSDV 8
                QPSVENV G+   ESSDV
Sbjct: 183 DGNDGQPSVENVEGSLRTESSDV 205


>ref|XP_021982861.1| nucleolin-like isoform X1 [Helianthus annuus]
 gb|OTG15456.1| putative nucleotide-binding alpha-beta plait domain-containing
           protein [Helianthus annuus]
          Length = 926

 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 59/143 (41%), Positives = 70/143 (48%)
 Frame = -3

Query: 436 TTTPEPIVDAPKVEDETVKVTPGTKSGNXXXXXXXXXXXXXXXXXXAGDSKTASASVKAE 257
           TTTPE  V   KVED+TV VTPGTKSGN                  +G +    A V  E
Sbjct: 65  TTTPETPVAEVKVEDDTVNVTPGTKSGNKKTVKKVVKRTVIRKKPKSGGAGEPPALVSDE 124

Query: 256 EDDSEVPAEKESVEHVEEMKDAEPVKQEELSPNDENDDVAVSQXXXXXXXXXXXXXXXXX 77
           +  S VPAE+E  E +EE+KD   VKQEE S +D N D+ +S                  
Sbjct: 125 QGGSVVPAEQEQ-ERLEEVKDVVCVKQEESSVDDVN-DLGMSVEVVKDDVKTEDIMEDVE 182

Query: 76  XXXXVQPSVENVVGNSTQESSDV 8
                QPSVENV G+   ESSDV
Sbjct: 183 DGNDGQPSVENVEGSLRTESSDV 205


>ref|XP_021982862.1| nucleolin-like isoform X2 [Helianthus annuus]
          Length = 925

 Score = 78.6 bits (192), Expect = 4e-14
 Identities = 58/143 (40%), Positives = 70/143 (48%)
 Frame = -3

Query: 436 TTTPEPIVDAPKVEDETVKVTPGTKSGNXXXXXXXXXXXXXXXXXXAGDSKTASASVKAE 257
           TTTPE   +  KVED+TV VTPGTKSGN                  +G +    A V  E
Sbjct: 65  TTTPETPAEV-KVEDDTVNVTPGTKSGNKKTVKKVVKRTVIRKKPKSGGAGEPPALVSDE 123

Query: 256 EDDSEVPAEKESVEHVEEMKDAEPVKQEELSPNDENDDVAVSQXXXXXXXXXXXXXXXXX 77
           +  S VPAE+E  E +EE+KD   VKQEE S +D N D+ +S                  
Sbjct: 124 QGGSVVPAEQEQ-ERLEEVKDVVCVKQEESSVDDVN-DLGMSVEVVKDDVKTEDIMEDVE 181

Query: 76  XXXXVQPSVENVVGNSTQESSDV 8
                QPSVENV G+   ESSDV
Sbjct: 182 DGNDGQPSVENVEGSLRTESSDV 204


>ref|XP_023746716.1| nucleolin-like isoform X2 [Lactuca sativa]
          Length = 1097

 Score = 57.8 bits (138), Expect = 8e-07
 Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
 Frame = -3

Query: 433 TTPEPIVDAPKVEDETVKVTPGTKSGNXXXXXXXXXXXXXXXXXXAGDSKTASASVKAEE 254
           TTP+  V A K + +TVK TPGT+SG+                    D+K A   + A+E
Sbjct: 67  TTPKTPVSAIKPQADTVKATPGTRSGSKRTVKKVVKKTVIKKKPKLTDAK-AQPDLVADE 125

Query: 253 DDSEVPAEKESVEHVEEMKDAEPVKQEELSPND--------ENDDVAV 134
           +D E+  EK+S    EE+KD E  KQ+E SP+D        E+DDV +
Sbjct: 126 NDDELLTEKDS---FEEVKDMEHAKQQESSPSDAKNSIKEEEHDDVCM 170


>ref|XP_023746715.1| nucleolin-like isoform X1 [Lactuca sativa]
 gb|PLY64022.1| hypothetical protein LSAT_4X152820 [Lactuca sativa]
          Length = 1099

 Score = 57.8 bits (138), Expect = 8e-07
 Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
 Frame = -3

Query: 433 TTPEPIVDAPKVEDETVKVTPGTKSGNXXXXXXXXXXXXXXXXXXAGDSKTASASVKAEE 254
           TTP+  V A K + +TVK TPGT+SG+                    D+K A   + A+E
Sbjct: 67  TTPKTPVSAIKPQADTVKATPGTRSGSKRTVKKVVKKTVIKKKPKLTDAK-AQPDLVADE 125

Query: 253 DDSEVPAEKESVEHVEEMKDAEPVKQEELSPND--------ENDDVAV 134
           +D E+  EK+S    EE+KD E  KQ+E SP+D        E+DDV +
Sbjct: 126 NDDELLTEKDS---FEEVKDMEHAKQQESSPSDAKNSIKEEEHDDVCM 170


Top