BLASTX nr result

ID: Chrysanthemum22_contig00016283 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00016283
         (364 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023760747.1| chromatin structure-remodeling complex prote...   102   8e-23
ref|XP_022021874.1| chromatin structure-remodeling complex prote...    97   9e-21
gb|OTF86807.1| putative SNF2-related, N-terminal domain-containi...    97   9e-21
ref|XP_022021873.1| chromatin structure-remodeling complex prote...    97   9e-21
ref|XP_022021872.1| chromatin structure-remodeling complex prote...    97   9e-21
gb|KVI04323.1| Helicase, C-terminal [Cynara cardunculus var. sco...    93   2e-19

>ref|XP_023760747.1| chromatin structure-remodeling complex protein SYD [Lactuca sativa]
 gb|PLY87790.1| hypothetical protein LSAT_8X137440 [Lactuca sativa]
          Length = 2421

 Score =  102 bits (254), Expect = 8e-23
 Identities = 48/69 (69%), Positives = 58/69 (84%)
 Frame = +3

Query: 60  ITTVKSHGSSAGLSGSYESTEPGSSRPMQFSSSYDNQNAANMMHKVPAGKALDHERGFLN 239
           + ++KSHGS+AGLSGSYES+EPG+   MQFS+SYDNQ AA +MHK PAGKALDHE GF N
Sbjct: 145 LNSMKSHGSNAGLSGSYESSEPGNPLSMQFSNSYDNQTAAMLMHKTPAGKALDHEGGFSN 204

Query: 240 VIPNASKAV 266
           V+ NASK +
Sbjct: 205 VMANASKTL 213


>ref|XP_022021874.1| chromatin structure-remodeling complex protein SYD isoform X3
           [Helianthus annuus]
          Length = 2637

 Score = 96.7 bits (239), Expect = 9e-21
 Identities = 45/70 (64%), Positives = 56/70 (80%)
 Frame = +3

Query: 60  ITTVKSHGSSAGLSGSYESTEPGSSRPMQFSSSYDNQNAANMMHKVPAGKALDHERGFLN 239
           + ++KSHGS+AG SGSYES EPG+ R MQFS+SYDNQ+A+ +MHK P GK LDHE G  N
Sbjct: 145 LPSIKSHGSNAGTSGSYESAEPGNPRSMQFSNSYDNQSASMLMHKGPTGKTLDHEGGLPN 204

Query: 240 VIPNASKAVQ 269
           V+ +ASK VQ
Sbjct: 205 VMASASKTVQ 214


>gb|OTF86807.1| putative SNF2-related, N-terminal domain-containing protein
           [Helianthus annuus]
          Length = 2681

 Score = 96.7 bits (239), Expect = 9e-21
 Identities = 45/70 (64%), Positives = 56/70 (80%)
 Frame = +3

Query: 60  ITTVKSHGSSAGLSGSYESTEPGSSRPMQFSSSYDNQNAANMMHKVPAGKALDHERGFLN 239
           + ++KSHGS+AG SGSYES EPG+ R MQFS+SYDNQ+A+ +MHK P GK LDHE G  N
Sbjct: 136 LPSIKSHGSNAGTSGSYESAEPGNPRSMQFSNSYDNQSASMLMHKGPTGKTLDHEGGLPN 195

Query: 240 VIPNASKAVQ 269
           V+ +ASK VQ
Sbjct: 196 VMASASKTVQ 205


>ref|XP_022021873.1| chromatin structure-remodeling complex protein SYD isoform X2
           [Helianthus annuus]
          Length = 2689

 Score = 96.7 bits (239), Expect = 9e-21
 Identities = 45/70 (64%), Positives = 56/70 (80%)
 Frame = +3

Query: 60  ITTVKSHGSSAGLSGSYESTEPGSSRPMQFSSSYDNQNAANMMHKVPAGKALDHERGFLN 239
           + ++KSHGS+AG SGSYES EPG+ R MQFS+SYDNQ+A+ +MHK P GK LDHE G  N
Sbjct: 145 LPSIKSHGSNAGTSGSYESAEPGNPRSMQFSNSYDNQSASMLMHKGPTGKTLDHEGGLPN 204

Query: 240 VIPNASKAVQ 269
           V+ +ASK VQ
Sbjct: 205 VMASASKTVQ 214


>ref|XP_022021872.1| chromatin structure-remodeling complex protein SYD isoform X1
           [Helianthus annuus]
          Length = 2690

 Score = 96.7 bits (239), Expect = 9e-21
 Identities = 45/70 (64%), Positives = 56/70 (80%)
 Frame = +3

Query: 60  ITTVKSHGSSAGLSGSYESTEPGSSRPMQFSSSYDNQNAANMMHKVPAGKALDHERGFLN 239
           + ++KSHGS+AG SGSYES EPG+ R MQFS+SYDNQ+A+ +MHK P GK LDHE G  N
Sbjct: 145 LPSIKSHGSNAGTSGSYESAEPGNPRSMQFSNSYDNQSASMLMHKGPTGKTLDHEGGLPN 204

Query: 240 VIPNASKAVQ 269
           V+ +ASK VQ
Sbjct: 205 VMASASKTVQ 214


>gb|KVI04323.1| Helicase, C-terminal [Cynara cardunculus var. scolymus]
          Length = 2874

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 45/67 (67%), Positives = 53/67 (79%)
 Frame = +3

Query: 69  VKSHGSSAGLSGSYESTEPGSSRPMQFSSSYDNQNAANMMHKVPAGKALDHERGFLNVIP 248
           +KSHGS AG SGSYES EPG+   MQFS+SYDNQ+AA +MHK PAGKAL+ E  F NV+ 
Sbjct: 181 IKSHGSDAGFSGSYESAEPGNPLSMQFSNSYDNQSAAMLMHKGPAGKALEQEGRFPNVMA 240

Query: 249 NASKAVQ 269
           N+SK VQ
Sbjct: 241 NSSKTVQ 247


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