BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00016278
         (388 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI04323.1| Helicase, C-terminal [Cynara cardunculus var. sco...   101   3e-22

>gb|KVI04323.1| Helicase, C-terminal [Cynara cardunculus var. scolymus]
          Length = 2874

 Score =  101 bits (251), Expect = 3e-22
 Identities = 60/122 (49%), Positives = 72/122 (59%), Gaps = 13/122 (10%)
 Frame = +1

Query: 1    RGKKSHNVVLGIPGVKASSPVSKPETGSLAVPSTASQKVNEPLASGSXXXXXXXXXXXXX 180
            RG+K +NVVL IPG++ASSPVSKPETGSL VP+T S+  N+PL S +             
Sbjct: 1829 RGRKPNNVVLAIPGLRASSPVSKPETGSLVVPATTSEIQNQPLVSDATAVNVVSNIPTPG 1888

Query: 181  XXXXSVTVPPSKTSKSDTASPVTSVPATS-------------LVTTDVGTPKTPVSVPVS 321
                 VTV P +TSKSD A P TSVPATS             LV  DVGT + P+SV V 
Sbjct: 1889 TVGTPVTVSPPETSKSDIALPKTSVPATSFAASSIFADPGETLVDPDVGTTQMPLSVSVG 1948

Query: 322  SE 327
            S+
Sbjct: 1949 SQ 1950