BLASTX nr result

ID: Chrysanthemum22_contig00015971 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00015971
         (353 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023734260.1| protein NUCLEAR FUSION DEFECTIVE 4-like [Lac...    54   7e-06

>ref|XP_023734260.1| protein NUCLEAR FUSION DEFECTIVE 4-like [Lactuca sativa]
          Length = 515

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 26/52 (50%), Positives = 32/52 (61%)
 Frame = -1

Query: 350 GGGSCYGVHCFMLSXXXXXXXXXXXXXXXXXXXFRTRGFYALMIHRQSKQLL 195
           GGGSC+G+HCFM+S                   FRTRGFYAL++ R+SKQLL
Sbjct: 463 GGGSCHGIHCFMVSYFVFAGVCVFGFLVSLVLFFRTRGFYALILQRRSKQLL 514


Top