BLASTX nr result

ID: Chrysanthemum22_contig00015853 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00015853
         (395 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTF97228.1| putative gag-polypeptide of LTR copia-type [Helia...    60   7e-08
ref|XP_022028789.1| uncharacterized protein LOC110929914 [Helian...    60   1e-07
ref|XP_021986675.1| uncharacterized protein LOC110883152 [Helian...    60   1e-07
gb|OTG10849.1| putative reverse transcriptase, RNA-dependent DNA...    60   1e-07
gb|OTF92045.1| putative ribonuclease H-like domain-containing pr...    59   1e-07
ref|XP_021995866.1| uncharacterized protein LOC110893052 [Helian...    59   2e-07

>gb|OTF97228.1| putative gag-polypeptide of LTR copia-type [Helianthus annuus]
          Length = 583

 Score = 60.1 bits (144), Expect = 7e-08
 Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
 Frame = +1

Query: 1   SIVSGEESHRNFSSGTGSIKPNVSAFASKFFDXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           SIVS EESHRN SSG+ +   +  +  ++ FD                            
Sbjct: 221 SIVSREESHRNSSSGSKTQSVSFVSRTTQSFDQKKKEFKGPNPN---------------- 264

Query: 181 LKCSNCKKPGHTIDRCYGLVGYPAGY-------GKRNFTSN 282
           LKC++C K GHT+DRC+ LVGYP+G+       G +NF++N
Sbjct: 265 LKCTHCNKLGHTVDRCFELVGYPSGFRKKSGGQGAKNFSNN 305


>ref|XP_022028789.1| uncharacterized protein LOC110929914 [Helianthus annuus]
          Length = 449

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%)
 Frame = +1

Query: 1   SIVSGEESHRNFSSGTGSIKPNVSAFASKFFDXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           SIVS EESHR  S+GT S   +  + AS+ FD                            
Sbjct: 219 SIVSREESHRLSSNGTKSQNVSFVSKASQSFDNKKRSTRGPNN----------------- 261

Query: 181 LKCSNCKKPGHTIDRCYGLVGYPAGYGKRN 270
           LKCS+C   GHTIDRC+ ++GYP+G+ +RN
Sbjct: 262 LKCSHCNMLGHTIDRCFEIIGYPSGFRRRN 291


>ref|XP_021986675.1| uncharacterized protein LOC110883152 [Helianthus annuus]
          Length = 738

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 42/100 (42%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
 Frame = +1

Query: 1   SIVSGEESHRNFSSGTGSIKPNVSAFASKFFDXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           SIVS EESHRN SSG+ S   NVS F SK                               
Sbjct: 221 SIVSREESHRNSSSGSKS--QNVS-FVSK-------------TTQSFEQKRKEFRGPNPN 264

Query: 181 LKCSNCKKPGHTIDRCYGLVGYPAGYGKR------NFTSN 282
           LKC++C K GHT+DRC+ LVGYP+G+ K+      NF SN
Sbjct: 265 LKCTHCNKLGHTVDRCFELVGYPSGFKKKSGGQGGNFFSN 304


>gb|OTG10849.1| putative reverse transcriptase, RNA-dependent DNA polymerase,
           Gag-polypeptide of LTR copia-type [Helianthus annuus]
          Length = 1071

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%)
 Frame = +1

Query: 1   SIVSGEESHRNFSSGTGSIKPNVSAFASKFFDXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           SIVS EESHR  S+GT S   +  + AS+ FD                            
Sbjct: 219 SIVSREESHRLSSNGTKSQNVSFISKASQSFDNKKRSTRGPNN----------------- 261

Query: 181 LKCSNCKKPGHTIDRCYGLVGYPAGYGKRN 270
           LKCS+C   GHTIDRC+ ++GYP+G+ +RN
Sbjct: 262 LKCSHCNMLGHTIDRCFEIIGYPSGFRRRN 291


>gb|OTF92045.1| putative ribonuclease H-like domain-containing protein [Helianthus
           annuus]
          Length = 1342

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 36/89 (40%), Positives = 43/89 (48%)
 Frame = +1

Query: 1   SIVSGEESHRNFSSGTGSIKPNVSAFASKFFDXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           SIVS EESHRN S+GT S   +  A  S+ FD                            
Sbjct: 221 SIVSREESHRNSSTGTKSQNVSFVAKGSQSFDQRKKEFRGPNPN---------------- 264

Query: 181 LKCSNCKKPGHTIDRCYGLVGYPAGYGKR 267
            KC++C K GHT DRCY LVGYP G+ K+
Sbjct: 265 FKCTHCNKLGHTNDRCYELVGYPPGFKKK 293


>ref|XP_021995866.1| uncharacterized protein LOC110893052 [Helianthus annuus]
          Length = 357

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 35/89 (39%), Positives = 43/89 (48%)
 Frame = +1

Query: 1   SIVSGEESHRNFSSGTGSIKPNVSAFASKFFDXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           SIVS EESHRN S GT +   +  +  +  FD                            
Sbjct: 221 SIVSREESHRNASVGTKNQSVSFVSKGNSSFDQKKKEFRGPNPN---------------- 264

Query: 181 LKCSNCKKPGHTIDRCYGLVGYPAGYGKR 267
           LKCS+C K GHT DRCY LVGYP+G+ K+
Sbjct: 265 LKCSHCNKIGHTTDRCYELVGYPSGFKKK 293


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