BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00015638
         (536 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021994521.1| double-stranded RNA-binding protein 4-like [...    89   2e-17
gb|OTG09070.1| putative double-stranded RNA-binding domain-conta...    89   3e-17
gb|KVI00052.1| Double-stranded RNA-binding [Cynara cardunculus v...    76   3e-13
ref|XP_023768028.1| double-stranded RNA-binding protein 4-like i...    72   1e-11
ref|XP_023768027.1| double-stranded RNA-binding protein 4-like i...    72   2e-11
ref|XP_023768026.1| double-stranded RNA-binding protein 4-like i...    72   2e-11

>ref|XP_021994521.1| double-stranded RNA-binding protein 4-like [Helianthus annuus]
          Length = 385

 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
 Frame = +2

Query: 2   DFQKLSIGRENSVPQAGEGSSSNGKKVHISFNDTASK--IGLGGARPQATKIVIRPHVAG 175
           D  K SI   N V QAGEG  SNGKK+    N+   K  +G G A+P  TKI+IRPHV G
Sbjct: 300 DVPKPSIKLTNHVIQAGEGPGSNGKKIQPFVNEATLKSVMGSGSAKPHPTKILIRPHVQG 359

Query: 176 MTYDGLIKVSDDEWVAMQVTVD 241
           MTYDG I+V+D+EWVAM+V++D
Sbjct: 360 MTYDGPIQVADEEWVAMKVSMD 381


>gb|OTG09070.1| putative double-stranded RNA-binding domain-containing protein
           [Helianthus annuus]
          Length = 425

 Score = 88.6 bits (218), Expect = 3e-17
 Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
 Frame = +2

Query: 2   DFQKLSIGRENSVPQAGEGSSSNGKKVHISFNDTASK--IGLGGARPQATKIVIRPHVAG 175
           D  K SI   N V QAGEG  SNGKK+    N+   K  +G G A+P  TKI+IRPHV G
Sbjct: 340 DVPKPSIKLTNHVIQAGEGPGSNGKKIQPFVNEATLKSVMGSGSAKPHPTKILIRPHVQG 399

Query: 176 MTYDGLIKVSDDEWVAMQVTVD 241
           MTYDG I+V+D+EWVAM+V++D
Sbjct: 400 MTYDGPIQVADEEWVAMKVSMD 421


>gb|KVI00052.1| Double-stranded RNA-binding [Cynara cardunculus var. scolymus]
          Length = 278

 Score = 75.9 bits (185), Expect = 3e-13
 Identities = 42/82 (51%), Positives = 55/82 (67%)
 Frame = +2

Query: 2   DFQKLSIGRENSVPQAGEGSSSNGKKVHISFNDTASKIGLGGARPQATKIVIRPHVAGMT 181
           D    SI +E    +  +GS  NGK+   S  + +S   LG A+P +TKIVIRPHV GMT
Sbjct: 202 DQASCSIAKE---AEKAKGSGLNGKR---SQQNQSSVTDLGAAKPVSTKIVIRPHVHGMT 255

Query: 182 YDGLIKVSDDEWVAMQVTVDEE 247
           Y+G I+V+DDEWVAM+V VD+E
Sbjct: 256 YEGPIEVADDEWVAMKVNVDDE 277


>ref|XP_023768028.1| double-stranded RNA-binding protein 4-like isoform X3 [Lactuca
           sativa]
          Length = 354

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 45/93 (48%), Positives = 55/93 (59%), Gaps = 11/93 (11%)
 Frame = +2

Query: 2   DFQKLSIGRENSVPQA-------GEGSSSNGKKVHISFNDTASKIGL----GGARPQATK 148
           D  KL+I REN   +A       G GS SNGK+     N +  ++ L    G A P  TK
Sbjct: 266 DEAKLNIMRENLKTRANQAREGSGSGSGSNGKR-----NQSYVRVDLVKDSGSAMPHKTK 320

Query: 149 IVIRPHVAGMTYDGLIKVSDDEWVAMQVTVDEE 247
           IVIR H  GMTY+G I VSDDEWVAM+V V++E
Sbjct: 321 IVIRAHAQGMTYEGPIHVSDDEWVAMKVNVEDE 353


>ref|XP_023768027.1| double-stranded RNA-binding protein 4-like isoform X2 [Lactuca
           sativa]
 gb|PLY82217.1| hypothetical protein LSAT_1X56161 [Lactuca sativa]
          Length = 355

 Score = 71.6 bits (174), Expect = 2e-11
 Identities = 45/95 (47%), Positives = 55/95 (57%), Gaps = 13/95 (13%)
 Frame = +2

Query: 2   DFQKLSIGRENSVPQA---------GEGSSSNGKKVHISFNDTASKIGL----GGARPQA 142
           D  KL+I REN   +A         G GS SNGK+     N +  ++ L    G A P  
Sbjct: 265 DEAKLNIMRENLKTRANQAREGSGSGSGSGSNGKR-----NQSYVRVDLVKDSGSAMPHK 319

Query: 143 TKIVIRPHVAGMTYDGLIKVSDDEWVAMQVTVDEE 247
           TKIVIR H  GMTY+G I VSDDEWVAM+V V++E
Sbjct: 320 TKIVIRAHAQGMTYEGPIHVSDDEWVAMKVNVEDE 354


>ref|XP_023768026.1| double-stranded RNA-binding protein 4-like isoform X1 [Lactuca
           sativa]
          Length = 356

 Score = 71.6 bits (174), Expect = 2e-11
 Identities = 45/95 (47%), Positives = 55/95 (57%), Gaps = 13/95 (13%)
 Frame = +2

Query: 2   DFQKLSIGRENSVPQA---------GEGSSSNGKKVHISFNDTASKIGL----GGARPQA 142
           D  KL+I REN   +A         G GS SNGK+     N +  ++ L    G A P  
Sbjct: 266 DEAKLNIMRENLKTRANQAREGSGSGSGSGSNGKR-----NQSYVRVDLVKDSGSAMPHK 320

Query: 143 TKIVIRPHVAGMTYDGLIKVSDDEWVAMQVTVDEE 247
           TKIVIR H  GMTY+G I VSDDEWVAM+V V++E
Sbjct: 321 TKIVIRAHAQGMTYEGPIHVSDDEWVAMKVNVEDE 355