BLASTX nr result

ID: Chrysanthemum22_contig00015210 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00015210
         (350 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021990233.1| nuclear pore complex protein NUP205 isoform ...    70   2e-11
ref|XP_021990232.1| nuclear pore complex protein NUP205 isoform ...    70   2e-11
gb|KVH93779.1| Nucleoporin Nup186/Nup192/Nup205 [Cynara carduncu...    67   2e-10
gb|PLY69685.1| hypothetical protein LSAT_5X96021 [Lactuca sativa]      65   6e-10
ref|XP_023739109.1| nuclear pore complex protein NUP205 [Lactuca...    65   6e-10

>ref|XP_021990233.1| nuclear pore complex protein NUP205 isoform X2 [Helianthus annuus]
 gb|OTG12971.1| Protein of unknown function (DUF3414) [Helianthus annuus]
          Length = 1833

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 36/60 (60%), Positives = 44/60 (73%)
 Frame = +2

Query: 2    TQNMQIXXXXXXXXXXXXHIFTQGSLRRFDTNFGKDSFADIHRKRMVVSPSLRLVFSLTA 181
            TQNMQ+                +G++RRFDT+FGKDSFAD+HR+RMVVSPSLRLVFSLT+
Sbjct: 1493 TQNMQV----------------KGNIRRFDTSFGKDSFADVHRQRMVVSPSLRLVFSLTS 1536


>ref|XP_021990232.1| nuclear pore complex protein NUP205 isoform X1 [Helianthus annuus]
          Length = 1834

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 36/60 (60%), Positives = 44/60 (73%)
 Frame = +2

Query: 2    TQNMQIXXXXXXXXXXXXHIFTQGSLRRFDTNFGKDSFADIHRKRMVVSPSLRLVFSLTA 181
            TQNMQ+                +G++RRFDT+FGKDSFAD+HR+RMVVSPSLRLVFSLT+
Sbjct: 1494 TQNMQV----------------KGNIRRFDTSFGKDSFADVHRQRMVVSPSLRLVFSLTS 1537


>gb|KVH93779.1| Nucleoporin Nup186/Nup192/Nup205 [Cynara cardunculus var. scolymus]
          Length = 1978

 Score = 67.0 bits (162), Expect = 2e-10
 Identities = 29/38 (76%), Positives = 37/38 (97%)
 Frame = +2

Query: 68   QGSLRRFDTNFGKDSFADIHRKRMVVSPSLRLVFSLTA 181
            +G+LRRFDT+FGKDSFAD+HR+RM++SP LRLVFSLT+
Sbjct: 1620 KGNLRRFDTSFGKDSFADVHRQRMIISPLLRLVFSLTS 1657


>gb|PLY69685.1| hypothetical protein LSAT_5X96021 [Lactuca sativa]
          Length = 1836

 Score = 65.5 bits (158), Expect = 6e-10
 Identities = 30/36 (83%), Positives = 35/36 (97%)
 Frame = +2

Query: 74   SLRRFDTNFGKDSFADIHRKRMVVSPSLRLVFSLTA 181
            S+RRFDT+FGKDSFAD+HR+RMVVSP LRLVFSLT+
Sbjct: 1489 SIRRFDTSFGKDSFADVHRQRMVVSPLLRLVFSLTS 1524


>ref|XP_023739109.1| nuclear pore complex protein NUP205 [Lactuca sativa]
          Length = 1873

 Score = 65.5 bits (158), Expect = 6e-10
 Identities = 30/36 (83%), Positives = 35/36 (97%)
 Frame = +2

Query: 74   SLRRFDTNFGKDSFADIHRKRMVVSPSLRLVFSLTA 181
            S+RRFDT+FGKDSFAD+HR+RMVVSP LRLVFSLT+
Sbjct: 1526 SIRRFDTSFGKDSFADVHRQRMVVSPLLRLVFSLTS 1561


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