BLASTX nr result
ID: Chrysanthemum22_contig00014618
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00014618
(359 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KVI05681.1| Coilin [Cynara cardunculus var. scolymus] 103 3e-23
ref|XP_021998014.1| coilin isoform X2 [Helianthus annuus] >gi|11... 84 3e-16
ref|XP_021998013.1| coilin isoform X1 [Helianthus annuus] 84 3e-16
gb|KVH95655.1| Coilin, partial [Cynara cardunculus var. scolymus] 69 3e-11
ref|XP_023768377.1| coilin [Lactuca sativa] >gi|1322390502|gb|PL... 60 7e-08
ref|XP_023766084.1| coilin-like [Lactuca sativa] 57 4e-07
ref|XP_023770395.1| coilin-like [Lactuca sativa] 54 9e-06
gb|PLY80392.1| hypothetical protein LSAT_3X132580 [Lactuca sativa] 54 9e-06
>gb|KVI05681.1| Coilin [Cynara cardunculus var. scolymus]
Length = 673
Score = 103 bits (257), Expect = 3e-23
Identities = 65/131 (49%), Positives = 74/131 (56%), Gaps = 12/131 (9%)
Frame = +1
Query: 1 IDHAINGESLHXXXXXXXXXXRNEETNKENAETLDKNVK------------DNVKGVEQA 144
ID+ NGESL NEETNK NAE D+ VK DNV+GVE A
Sbjct: 245 IDNVSNGESLPGKMSKKKNKP-NEETNKGNAEINDEKVKSSSNVKRSERLQDNVEGVEHA 303
Query: 145 STTPDEAKKGPXXXXXXXXXXXXXXXELANVSQNEPETHLEPEVPEAENKEANGHPEGLL 324
ST D AKK P ELA +SQ PETHLEPEV + +NKEANGHP+G +
Sbjct: 304 STPLDGAKKVPSRSARRKKAKRQWRRELAKISQT-PETHLEPEVSKVDNKEANGHPKGPV 362
Query: 325 KQDQVPTKNVH 357
KQDQ+PTK VH
Sbjct: 363 KQDQLPTKVVH 373
>ref|XP_021998014.1| coilin isoform X2 [Helianthus annuus]
gb|OTG05271.1| putative sphere organelles protein-related protein [Helianthus
annuus]
Length = 618
Score = 83.6 bits (205), Expect = 3e-16
Identities = 46/97 (47%), Positives = 57/97 (58%)
Frame = +1
Query: 67 NEETNKENAETLDKNVKDNVKGVEQASTTPDEAKKGPXXXXXXXXXXXXXXXELANVSQN 246
N+E KENAET DKN++D+V+GVE S+ D KKGP E A N
Sbjct: 219 NDEIKKENAETSDKNIEDDVEGVEHVSSARDGTKKGPSRSARRKKAKRQWRREAAKRELN 278
Query: 247 EPETHLEPEVPEAENKEANGHPEGLLKQDQVPTKNVH 357
P+TH+EPE+ + ENKEA G P LKQDQVP + H
Sbjct: 279 -PDTHVEPEISKTENKEATGGP---LKQDQVPVEVKH 311
>ref|XP_021998013.1| coilin isoform X1 [Helianthus annuus]
Length = 619
Score = 83.6 bits (205), Expect = 3e-16
Identities = 46/97 (47%), Positives = 57/97 (58%)
Frame = +1
Query: 67 NEETNKENAETLDKNVKDNVKGVEQASTTPDEAKKGPXXXXXXXXXXXXXXXELANVSQN 246
N+E KENAET DKN++D+V+GVE S+ D KKGP E A N
Sbjct: 219 NDEIKKENAETSDKNIEDDVEGVEHVSSARDGTKKGPSRSARRKKAKRQWRREAAKRELN 278
Query: 247 EPETHLEPEVPEAENKEANGHPEGLLKQDQVPTKNVH 357
P+TH+EPE+ + ENKEA G P LKQDQVP + H
Sbjct: 279 -PDTHVEPEISKTENKEATGGP---LKQDQVPVEVKH 311
>gb|KVH95655.1| Coilin, partial [Cynara cardunculus var. scolymus]
Length = 810
Score = 69.3 bits (168), Expect = 3e-11
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 12/109 (11%)
Frame = +1
Query: 67 NEETNKENAETLDKNVKD------------NVKGVEQASTTPDEAKKGPXXXXXXXXXXX 210
NEETN+ +A T +K VK N++ V Q ST P AKK P
Sbjct: 285 NEETNR-SAATSNKKVKSPSIVKRSEQLQQNIEEVNQVSTAPG-AKKIPSRSARRKKAKR 342
Query: 211 XXXXELANVSQNEPETHLEPEVPEAENKEANGHPEGLLKQDQVPTKNVH 357
ELA +S+ +P ++ +PEV +AEN+EANG P+GLL Q P K+VH
Sbjct: 343 EWMKELAKISKKKPYSYSKPEVTKAENEEANGRPKGLLHWKQAPNKSVH 391
>ref|XP_023768377.1| coilin [Lactuca sativa]
gb|PLY81994.1| hypothetical protein LSAT_8X152820 [Lactuca sativa]
Length = 650
Score = 59.7 bits (143), Expect = 7e-08
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Frame = +1
Query: 67 NEETNKENAETLDKNVK-------------DNVKGVEQASTTPDEAKKGPXXXXXXXXXX 207
NEE KE+ E D+ VK DNV+G+EQAST+PDEAKKGP
Sbjct: 268 NEELKKEDDEISDEKVKSSRRTKRSEEHQEDNVQGIEQASTSPDEAKKGPSRSARRKKAK 327
Query: 208 XXXXXELANVSQN-EPETHLEPEVPEAENKEANGHPEGLLKQDQ 336
EL +SQ + +THL E N GH + L+++++
Sbjct: 328 RQWKRELNKISQKPDTDTHL-----EGTNDHPKGHEKNLIEEEK 366
>ref|XP_023766084.1| coilin-like [Lactuca sativa]
Length = 363
Score = 57.4 bits (137), Expect = 4e-07
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Frame = +1
Query: 67 NEETNKENAETLDKN----VKDNVKGVEQASTTPDEAKKGPXXXXXXXXXXXXXXXELAN 234
NEE N + ET DK ++DNV+G+EQASTTPD KKG EL
Sbjct: 218 NEEANMGDGETSDKRSEEYLEDNVQGIEQASTTPDGDKKGSSRSARRKKAKRQWKRELTK 277
Query: 235 VSQN-EPETHLEPEVPEAENKEANGHPEGLLKQDQ 336
+SQ + +THL E N GH + L+++++
Sbjct: 278 ISQKPDTDTHL-----EGTNDHPKGHEKSLIEEEE 307
>ref|XP_023770395.1| coilin-like [Lactuca sativa]
Length = 385
Score = 53.5 bits (127), Expect = 9e-06
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Frame = +1
Query: 67 NEETNKENAETL-----------DKNVKDNVKGVEQASTTPDEAKKGPXXXXXXXXXXXX 213
NEE N +AET ++ ++DNV+G+EQASTTPD KKGP
Sbjct: 222 NEEANMGDAETRIVLHPSNLCRSEEYLEDNVQGIEQASTTPDGDKKGPSISARRKKAKRQ 281
Query: 214 XXXELANVSQN-EPETHLEPEVPEAENKEANGHPEGLLKQDQ 336
EL +SQ + THL E N GH + L ++++
Sbjct: 282 WKRELTKISQKPDTNTHL-----EGTNDHPKGHEKSLTEEEE 318
>gb|PLY80392.1| hypothetical protein LSAT_3X132580 [Lactuca sativa]
Length = 395
Score = 53.5 bits (127), Expect = 9e-06
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Frame = +1
Query: 67 NEETNKENAETL-----------DKNVKDNVKGVEQASTTPDEAKKGPXXXXXXXXXXXX 213
NEE N +AET ++ ++DNV+G+EQASTTPD KKGP
Sbjct: 119 NEEANMGDAETRIVLHPSNLCRSEEYLEDNVQGIEQASTTPDGDKKGPSISARRKKAKRQ 178
Query: 214 XXXELANVSQN-EPETHLEPEVPEAENKEANGHPEGLLKQDQ 336
EL +SQ + THL E N GH + L ++++
Sbjct: 179 WKRELTKISQKPDTNTHL-----EGTNDHPKGHEKSLTEEEE 215