BLASTX nr result

ID: Chrysanthemum22_contig00013902 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00013902
         (420 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH16502.1| SNARE associated Golgi protein [Cynara cardunculu...    61   4e-08

>gb|KVH16502.1| SNARE associated Golgi protein [Cynara cardunculus var. scolymus]
          Length = 373

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 33/50 (66%), Positives = 39/50 (78%), Gaps = 3/50 (6%)
 Frame = +3

Query: 279 SQADGEHVRLVISNERITVEAE---PQIERTNHRSLKWWIKTVILSIVAI 419
           ++ D EHVRLVISNER T EA+   P+ ER+N  SLKWWIKTV LSI+AI
Sbjct: 18  AREDSEHVRLVISNERGTAEADTFQPRTERSNE-SLKWWIKTVTLSIIAI 66


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