BLASTX nr result

ID: Chrysanthemum22_contig00013778 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00013778
         (817 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|APM86404.1| scarecrow-like transcription factor PAT1 protein ...   143   8e-36
gb|ALF46569.1| GRAS protein, partial [Chrysanthemum x morifolium]      99   7e-20
gb|AOA52175.1| PAT1 protein [Chrysanthemum lavandulifolium]            67   7e-09
gb|PLY83595.1| hypothetical protein LSAT_5X8041 [Lactuca sativa]       64   1e-07
gb|KVH99094.1| Transcription factor GRAS, partial [Cynara cardun...    63   1e-07
ref|XP_023766353.1| scarecrow-like protein 21 [Lactuca sativa]         63   2e-07

>gb|APM86404.1| scarecrow-like transcription factor PAT1 protein [Chrysanthemum
           lavandulifolium]
          Length = 513

 Score =  143 bits (361), Expect = 8e-36
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = +3

Query: 615 MGESNQPYYWTTSTEQDTDQNLYSTDVNQFSVQTPELTNNSITVSFSSNGSPTSLQDSHS 794
           MGESNQPYYWTTSTEQDTDQNLYSTDVNQFSVQTPELTNNSITVSFSSNGSPTSLQDSHS
Sbjct: 1   MGESNQPYYWTTSTEQDTDQNLYSTDVNQFSVQTPELTNNSITVSFSSNGSPTSLQDSHS 60

Query: 795 FQPEPYH 815
           FQPEPYH
Sbjct: 61  FQPEPYH 67


>gb|ALF46569.1| GRAS protein, partial [Chrysanthemum x morifolium]
          Length = 516

 Score = 99.4 bits (246), Expect = 7e-20
 Identities = 51/71 (71%), Positives = 55/71 (77%), Gaps = 4/71 (5%)
 Frame = +3

Query: 615 MGESNQPYYWTTSTEQDTDQNLYSTDVNQ---FSVQTPELTNNSIT-VSFSSNGSPTSLQ 782
           M  SNQPYYWTT T+Q  DQNLY  DV+Q   FS QTPEL NNS + VSFS NGSP SLQ
Sbjct: 1   MQASNQPYYWTTPTQQHMDQNLYLGDVSQGSHFSDQTPELANNSSSSVSFSPNGSPISLQ 60

Query: 783 DSHSFQPEPYH 815
           DSHSFQP+PYH
Sbjct: 61  DSHSFQPDPYH 71


>gb|AOA52175.1| PAT1 protein [Chrysanthemum lavandulifolium]
          Length = 501

 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 36/53 (67%), Positives = 39/53 (73%), Gaps = 4/53 (7%)
 Frame = +3

Query: 669 DQNLYSTDVNQ---FSVQTPELTNNSIT-VSFSSNGSPTSLQDSHSFQPEPYH 815
           DQNLY  DV+Q    S QTPE  NNS + VS S NGSP SLQDSHSFQP+PYH
Sbjct: 2   DQNLYLGDVSQGSHLSNQTPEFANNSSSSVSLSPNGSPISLQDSHSFQPDPYH 54


>gb|PLY83595.1| hypothetical protein LSAT_5X8041 [Lactuca sativa]
          Length = 665

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 38/68 (55%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
 Frame = +3

Query: 624 SNQPYYWTTSTEQDTDQNLYSTDVNQ---FSVQTPELTNNSI-TVSFSSNGSPTSLQDSH 791
           S Q YY T    ++ D+NLY +D+NQ   FSVQT E  NNS  T SFSSNGS  S QDSH
Sbjct: 159 SMQNYYQTPV--ENMDRNLYPSDLNQGIRFSVQTSEFGNNSSSTASFSSNGSSISQQDSH 216

Query: 792 SFQPEPYH 815
           S+ P+ YH
Sbjct: 217 SYIPDTYH 224


>gb|KVH99094.1| Transcription factor GRAS, partial [Cynara cardunculus var.
           scolymus]
          Length = 568

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
 Frame = +3

Query: 615 MGESNQPYYWTTSTEQDTDQNLYSTDVNQ---FSVQTPELTN-NSITVSFSSNGSPTSLQ 782
           M  S Q +Y   +  +  D+NLYS +++Q   FSVQTPE  N +S T SFSSNGSP S  
Sbjct: 60  MQASKQNHY--RNPAEKMDRNLYSAEIDQGGRFSVQTPEFGNYSSSTASFSSNGSPISQP 117

Query: 783 DSHSFQPEPYH 815
           DSHS++P+ YH
Sbjct: 118 DSHSYRPDIYH 128


>ref|XP_023766353.1| scarecrow-like protein 21 [Lactuca sativa]
          Length = 506

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 37/66 (56%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
 Frame = +3

Query: 630 QPYYWTTSTEQDTDQNLYSTDVNQ---FSVQTPELTNNSI-TVSFSSNGSPTSLQDSHSF 797
           Q YY T    ++ D+NLY +D+NQ   FSVQT E  NNS  T SFSSNGS  S QDSHS+
Sbjct: 2   QNYYQTPV--ENMDRNLYPSDLNQGIRFSVQTSEFGNNSSSTASFSSNGSSISQQDSHSY 59

Query: 798 QPEPYH 815
            P+ YH
Sbjct: 60  IPDTYH 65


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