BLASTX nr result

ID: Chrysanthemum22_contig00013236 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00013236
         (760 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023735558.1| classical arabinogalactan protein 2-like [La...    65   2e-09
ref|XP_023762319.1| classical arabinogalactan protein 4-like [La...    57   1e-06

>ref|XP_023735558.1| classical arabinogalactan protein 2-like [Lactuca sativa]
 gb|PLY72554.1| hypothetical protein LSAT_2X65780 [Lactuca sativa]
          Length = 133

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +2

Query: 440 DLPPSGTFADGWVNRAVIAGTALAGAFVSVTLM 538
           DLPPSGTF DGWVNRAVIAGTALAGAF +VTLM
Sbjct: 101 DLPPSGTFVDGWVNRAVIAGTALAGAFFAVTLM 133


>ref|XP_023762319.1| classical arabinogalactan protein 4-like [Lactuca sativa]
          Length = 126

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 25/30 (83%), Positives = 30/30 (100%)
 Frame = +2

Query: 449 PSGTFADGWVNRAVIAGTALAGAFVSVTLM 538
           PSG+FADGWVNRAVIAGTA+AG+F++VTLM
Sbjct: 97  PSGSFADGWVNRAVIAGTAVAGSFLAVTLM 126


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