BLASTX nr result

ID: Chrysanthemum22_contig00013148 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00013148
         (394 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI07195.1| Clathrin, heavy chain/VPS, 7-fold repeat-containi...    84   3e-16
gb|PLY93170.1| hypothetical protein LSAT_3X140700 [Lactuca sativa]     67   2e-10
ref|XP_023753683.1| vacuolar protein sorting-associated protein ...    67   2e-10

>gb|KVI07195.1| Clathrin, heavy chain/VPS, 7-fold repeat-containing protein,
           partial [Cynara cardunculus var. scolymus]
          Length = 2019

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 62/154 (40%), Positives = 78/154 (50%), Gaps = 24/154 (15%)
 Frame = +3

Query: 3   VEFGDEGPSSAAEPDIG--------------IKSVLDDGSDDLNEGSYSDSTRIPTLQSV 140
           V+FGD+  SS A+P+IG               +SVLDDGSD+   G+YS+S  I T QSV
Sbjct: 258 VDFGDDTLSSVAKPEIGSPLNNENRFMNKVGTRSVLDDGSDEHIGGNYSESAPITTSQSV 317

Query: 141 EEADPISDEHVDAXXXXXXXXXXXXXXDASENLEQNEKDAEFGNEVEGDDDEMVPQTDVS 320
           E   P+    V+A              +  E+ + +EKD EFG E EGDD     QTDVS
Sbjct: 318 ERVFPLFHGRVNANEVEEDSTSVLSENNDFESRKLDEKDVEFGLEAEGDD--ATAQTDVS 375

Query: 321 VDMS--------ETKDERTPER--PRLKPLELAE 392
           VD          E  DERT  R    LKPL++AE
Sbjct: 376 VDTDGIVLHPGIEKNDERTQGRSCSSLKPLQVAE 409


>gb|PLY93170.1| hypothetical protein LSAT_3X140700 [Lactuca sativa]
          Length = 1833

 Score = 67.4 bits (163), Expect = 2e-10
 Identities = 52/145 (35%), Positives = 72/145 (49%), Gaps = 15/145 (10%)
 Frame = +3

Query: 3   VEFGDEGPSSAAEPDIG-----------IKSVLDDGSDDLNEGSYSDSTRIPTLQSVEEA 149
           +EFGD+  SSAA+P I              SVLD  S++L EG++++S  I TL S+ E 
Sbjct: 245 LEFGDDTRSSAAKPQISSPLNNEDGFNSTTSVLDSSSNELIEGNHTESAHISTL-SMGEM 303

Query: 150 DPISDEHVDAXXXXXXXXXXXXXXDASENLEQNEKDAEFGNEVEGDDDEMVPQTDVSVDM 329
            P S EHV+                +SE+   +E + EFG + EGDD  M  Q+DVS  M
Sbjct: 304 FPFSHEHVNTKEVEDSISV------SSEDTNLHENNVEFGLQAEGDD--MPAQSDVSAGM 355

Query: 330 S----ETKDERTPERPRLKPLELAE 392
                E  ++       LKPL+ AE
Sbjct: 356 DSILHEENEKNDGRTQALKPLQFAE 380


>ref|XP_023753683.1| vacuolar protein sorting-associated protein 8 homolog [Lactuca
           sativa]
          Length = 1845

 Score = 67.4 bits (163), Expect = 2e-10
 Identities = 52/145 (35%), Positives = 72/145 (49%), Gaps = 15/145 (10%)
 Frame = +3

Query: 3   VEFGDEGPSSAAEPDIG-----------IKSVLDDGSDDLNEGSYSDSTRIPTLQSVEEA 149
           +EFGD+  SSAA+P I              SVLD  S++L EG++++S  I TL S+ E 
Sbjct: 254 LEFGDDTRSSAAKPQISSPLNNEDGFNSTTSVLDSSSNELIEGNHTESAHISTL-SMGEM 312

Query: 150 DPISDEHVDAXXXXXXXXXXXXXXDASENLEQNEKDAEFGNEVEGDDDEMVPQTDVSVDM 329
            P S EHV+                +SE+   +E + EFG + EGDD  M  Q+DVS  M
Sbjct: 313 FPFSHEHVNTKEVEDSISV------SSEDTNLHENNVEFGLQAEGDD--MPAQSDVSAGM 364

Query: 330 S----ETKDERTPERPRLKPLELAE 392
                E  ++       LKPL+ AE
Sbjct: 365 DSILHEENEKNDGRTQALKPLQFAE 389


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