BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00012955
         (1040 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AQX33589.1| ribosomal protein S16 (chloroplast) [Pityopsis fa...    65   1e-09
gb|ATL76526.1| ribosomal protein s16 (plastid) [Chenopodium album]     52   9e-07
ref|YP_009123417.1| 30S ribosomal protein S16 (chloroplast) [Cat...    57   1e-06
emb|CAD59438.1| Rps16 protein, partial (plastid) [Clivia gardenii]     55   3e-06
gb|ANH20852.1| ribosomal protein S16 (chloroplast) [Arabidopsis ...    54   9e-06
gb|ANH20938.1| ribosomal protein S16 (chloroplast) [Arabidopsis ...    54   9e-06

>gb|AQX33589.1| ribosomal protein S16 (chloroplast) [Pityopsis falcata]
          Length = 84

 Score = 64.7 bits (156), Expect = 1e-09
 Identities = 40/71 (56%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
 Frame = +3

Query: 219 MPINKLEQLRKYIFDI---EIERIPFQ*IFK---IVGTAKTFSIDGVSRMNQPRYDSLIE 380
           +PI+KLEQLRKYIFDI   EIERI F+  F    ++   K F           RYDSLIE
Sbjct: 14  LPIHKLEQLRKYIFDIFDIEIERIRFEQFFNSKNLLERLKLFRYAVYRARINRRYDSLIE 73

Query: 381 RNPKRGMLLPF 413
           RN KRGMLLPF
Sbjct: 74  RNRKRGMLLPF 84


>gb|ATL76526.1| ribosomal protein s16 (plastid) [Chenopodium album]
          Length = 82

 Score = 52.0 bits (123), Expect(2) = 9e-07
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = +1

Query: 880 IYPDEPSIESLQLMFDPEEKEEIFRKWVW 966
           IYP+EPSIESLQLMF  EEKEEI RKWV+
Sbjct: 25  IYPNEPSIESLQLMFGAEEKEEICRKWVF 53



 Score = 30.8 bits (68), Expect(2) = 9e-07
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +3

Query: 810 FSRAVRGENFLYGSRGGGV 866
           FSRAVRG+N LY S+GG V
Sbjct: 4   FSRAVRGKNLLYVSKGGVV 22


>ref|YP_009123417.1| 30S ribosomal protein S16 (chloroplast) [Cattleya crispata]
 ref|YP_009328246.1| 30S ribosomal protein S16 (chloroplast) [Cattleya liliputana]
 gb|AJM70390.1| 30S ribosomal protein S16 (chloroplast) [Cattleya crispata]
 gb|AKE36688.1| 30S ribosomal protein S16 (chloroplast) [Cattleya liliputana]
          Length = 100

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 32/34 (94%)
 Frame = +3

Query: 861 GVLFHLHLSR*AVYRIVAIDVRSRREGRDLQKVG 962
           G +F+LHLS+ A+YRIVAIDVRSRREGRDL+KVG
Sbjct: 10  GGIFYLHLSQWAIYRIVAIDVRSRREGRDLRKVG 43


>emb|CAD59438.1| Rps16 protein, partial (plastid) [Clivia gardenii]
          Length = 74

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
 Frame = +3

Query: 87  SWLDVVCSILLEPFFFYWVL--M*IVHDGARVESIY*FLRGNDLGLMPINKLEQLRKYIF 260
           S +D+VCS+         ++    IVHDGAR +SI  F+ G +LGL+ INKL+QL KYI 
Sbjct: 1   SRIDIVCSVPARNLICVGLVNRKGIVHDGARTKSIDSFIGGKNLGLVTINKLDQLCKYIL 60

Query: 261 DIEIE 275
           +IE+E
Sbjct: 61  NIEME 65


>gb|ANH20852.1| ribosomal protein S16 (chloroplast) [Arabidopsis halleri subsp.
           gemmifera]
          Length = 87

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +3

Query: 867 LFHLHLSR*AVYRIVAIDVRSRREGRDLQKVG 962
           + H+HLS  AVYRIVAIDVRSRREGRDL KVG
Sbjct: 14  IIHIHLSLSAVYRIVAIDVRSRREGRDLSKVG 45


>gb|ANH20938.1| ribosomal protein S16 (chloroplast) [Arabidopsis lyrata subsp.
           petraea]
          Length = 88

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +3

Query: 867 LFHLHLSR*AVYRIVAIDVRSRREGRDLQKVG 962
           + H+HLS  AVYRIVAIDVRSRREGRDL KVG
Sbjct: 15  IIHIHLSLSAVYRIVAIDVRSRREGRDLSKVG 46