BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00012864
         (1573 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG07679.1| putative ribonuclease H-like domain-containing pr...   861   0.0  
gb|OTF94656.1| putative ribonuclease H-like domain-containing pr...   852   0.0  
gb|OTF86030.1| putative ribonuclease H-like domain-containing pr...   852   0.0  
dbj|BAK64102.1| gag-pol polyprotein [Eustoma exaltatum subsp. ru...   754   0.0  
ref|XP_015084225.1| PREDICTED: uncharacterized protein LOC107027...   744   0.0  
ref|XP_015084159.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   744   0.0  
gb|PRQ34236.1| putative RNA-directed DNA polymerase [Rosa chinen...   688   0.0  
gb|PNX71168.1| beta-galactosidase [Trifolium pratense]                685   0.0  
gb|OTG30285.1| putative reverse transcriptase, RNA-dependent DNA...   676   0.0  
gb|OTG04913.1| putative reverse transcriptase, RNA-dependent DNA...   670   0.0  
gb|PRQ60568.1| putative RNA-directed DNA polymerase [Rosa chinen...   679   0.0  
gb|KYP39293.1| Retrovirus-related Pol polyprotein from transposo...   666   0.0  
gb|PRQ60115.1| putative RNA-directed DNA polymerase [Rosa chinen...   684   0.0  
gb|PRQ52323.1| putative RNA-directed DNA polymerase [Rosa chinen...   684   0.0  
gb|PNX86057.1| beta-galactosidase [Trifolium pratense]                663   0.0  
gb|PNY13478.1| beta-galactosidase [Trifolium pratense]                661   0.0  
gb|PKA59461.1| Retrovirus-related Pol polyprotein from transposo...   677   0.0  
gb|PNY13477.1| retrovirus-related Pol polyprotein from transposo...   681   0.0  
gb|PRQ53465.1| putative RNA-directed DNA polymerase [Rosa chinen...   684   0.0  
gb|PRQ43270.1| putative RNA-directed DNA polymerase [Rosa chinen...   659   0.0  

>gb|OTG07679.1| putative ribonuclease H-like domain-containing protein [Helianthus
            annuus]
          Length = 1162

 Score =  861 bits (2224), Expect = 0.0
 Identities = 410/522 (78%), Positives = 462/522 (88%)
 Frame = -3

Query: 1571 SLYSEKIPSNTEEALKSENWKKAMDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYK 1392
            +L SE++PS T+EALKSE WKKAM+ EMEAL+KN TWEKC LP  KKPVGCRW+F++K++
Sbjct: 597  ALCSEQVPSTTQEALKSEEWKKAMETEMEALKKNNTWEKCTLPPGKKPVGCRWVFSVKHR 656

Query: 1391 PDGTIDRYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNA 1212
            PDGTI+RYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAAN+GWPLHQFDVKNA
Sbjct: 657  PDGTIERYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANKGWPLHQFDVKNA 716

Query: 1211 FLHGDLKEEVYMEAPPGFSGGFKTREVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFKQS 1032
            FLHG+L EEVYM+APPGF+  FK  E CRLKKSLYGLKQSPRAWFGRFT+AMKKYGFKQS
Sbjct: 717  FLHGELNEEVYMDAPPGFNENFKAGETCRLKKSLYGLKQSPRAWFGRFTLAMKKYGFKQS 776

Query: 1031 NSDHTLFLKRRQEYVTCLIIYVDDIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFLGI 852
            NSDHTLFLKRR   VTCLIIYVDD+I+TGNDE+E+  L++ LF+EFEMKDLGRLKYFLGI
Sbjct: 777  NSDHTLFLKRRGSLVTCLIIYVDDMILTGNDEEEMLMLRDKLFSEFEMKDLGRLKYFLGI 836

Query: 851  EVLRSQHGIFICQKKYILDLLTETGMLDCKPAETPMIANQKLYMEPEAELADKVRYQRMV 672
            EVLRS  GIFICQKKYILDLL ETGM++C+PA+TPM+ N  L+ME  AELADK RYQRMV
Sbjct: 837  EVLRSNQGIFICQKKYILDLLAETGMIECRPADTPMVVNHGLHMEDGAELADKERYQRMV 896

Query: 671  GKLIYLSHTRPDIAYAVGVVSQFMHQPQKAHMDAVERIIEYLKGTPGYGVLFESNGHLDI 492
            GKLIYLSHTRPDIAYAVGVVSQFMHQPQ +HM+AV RII YLKGT G+G+LF+SNGHL+I
Sbjct: 897  GKLIYLSHTRPDIAYAVGVVSQFMHQPQASHMEAVLRIIRYLKGTAGHGILFKSNGHLEI 956

Query: 491  QVYTDADWAGDKGKRRSTSGYFSLVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAEVL 312
            Q YTDADWAGDKG RRSTSGYF++VGGNLVTW           SAEAE+RG++RGLAE+L
Sbjct: 957  QAYTDADWAGDKGTRRSTSGYFTMVGGNLVTWRSKKQKVVALSSAEAEFRGVARGLAEIL 1016

Query: 311  WIRKLLTEVGFRPKRATQVFCDNKAAIQISENPVQHDRTKHVEIDRHFIKEKLEAGIIEL 132
            WIRKLLTE+GF P  AT++ CDNKAAIQISENPVQHDRTKHVE+DRHFIKEKLE GIIEL
Sbjct: 1017 WIRKLLTEIGFLPTTATKIMCDNKAAIQISENPVQHDRTKHVEVDRHFIKEKLEEGIIEL 1076

Query: 131  PFVRTEDQLADILTKAVGTRIMQDCLGKLNFGDPTIQLEGEC 6
            P+V+++DQLADILTKAV   +   CL KL+ GDPT QLEGEC
Sbjct: 1077 PYVQSKDQLADILTKAVNGNVFSSCLSKLSIGDPTTQLEGEC 1118


>gb|OTF94656.1| putative ribonuclease H-like domain-containing protein [Helianthus
            annuus]
          Length = 1139

 Score =  852 bits (2201), Expect = 0.0
 Identities = 404/522 (77%), Positives = 459/522 (87%)
 Frame = -3

Query: 1571 SLYSEKIPSNTEEALKSENWKKAMDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYK 1392
            +L SE++PS T+EAL SE WKKAM+ EMEAL+KN TWEKC LP  KKPVGCRW+F++K++
Sbjct: 605  ALCSEQMPSTTQEALSSEEWKKAMETEMEALKKNNTWEKCTLPPGKKPVGCRWVFSVKHR 664

Query: 1391 PDGTIDRYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNA 1212
            PDGTI+RYKARLVAKGYTQTYGIDYSETFSP+AKIDTIRVLFSIAAN+GWPLHQFDVKNA
Sbjct: 665  PDGTIERYKARLVAKGYTQTYGIDYSETFSPIAKIDTIRVLFSIAANKGWPLHQFDVKNA 724

Query: 1211 FLHGDLKEEVYMEAPPGFSGGFKTREVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFKQS 1032
            FLHG+L EEVYM+APPGF+  FK  E CRLKKSLYGLKQSPRAWFGRFT+AMKKYGFKQS
Sbjct: 725  FLHGELNEEVYMDAPPGFNENFKAGETCRLKKSLYGLKQSPRAWFGRFTLAMKKYGFKQS 784

Query: 1031 NSDHTLFLKRRQEYVTCLIIYVDDIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFLGI 852
            NSDHTLFLKRR   VTCLIIYVDD+I+TGNDE+E+  L++ LF+EFEMKDLGRLKYFLGI
Sbjct: 785  NSDHTLFLKRRGSLVTCLIIYVDDMILTGNDEEEMSMLRDKLFSEFEMKDLGRLKYFLGI 844

Query: 851  EVLRSQHGIFICQKKYILDLLTETGMLDCKPAETPMIANQKLYMEPEAELADKVRYQRMV 672
            EVLRS+ GIFICQ+KY+LDLL ETGM++C+PA+TPM+ N  L+ME  A+LADK RYQRMV
Sbjct: 845  EVLRSKQGIFICQRKYVLDLLAETGMIECRPADTPMMVNHGLHMEDGADLADKERYQRMV 904

Query: 671  GKLIYLSHTRPDIAYAVGVVSQFMHQPQKAHMDAVERIIEYLKGTPGYGVLFESNGHLDI 492
            GKL+YLSHTRPDIAYAVGVVSQFMHQPQ +HM+AV RII YLKGT G+G+LF+SNGHL+I
Sbjct: 905  GKLVYLSHTRPDIAYAVGVVSQFMHQPQASHMEAVLRIIRYLKGTAGHGILFKSNGHLEI 964

Query: 491  QVYTDADWAGDKGKRRSTSGYFSLVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAEVL 312
            Q YTDADWAGDKG RRSTSGYF++VGGNLVTW           SAEAE+RG++RGLAEVL
Sbjct: 965  QAYTDADWAGDKGTRRSTSGYFTMVGGNLVTWRSKKQKVVALSSAEAEFRGVARGLAEVL 1024

Query: 311  WIRKLLTEVGFRPKRATQVFCDNKAAIQISENPVQHDRTKHVEIDRHFIKEKLEAGIIEL 132
            W+RKLLTE+GF P  AT++ CDNKAAIQISENPVQHDRTKHVE+DRHFIKEKLE GIIEL
Sbjct: 1025 WVRKLLTEIGFLPTTATKIMCDNKAAIQISENPVQHDRTKHVEVDRHFIKEKLEEGIIEL 1084

Query: 131  PFVRTEDQLADILTKAVGTRIMQDCLGKLNFGDPTIQLEGEC 6
            P+V ++DQLADILTKAV       CL KL  GDPT QLEGEC
Sbjct: 1085 PYVASKDQLADILTKAVNGNSFSSCLSKLGIGDPTTQLEGEC 1126


>gb|OTF86030.1| putative ribonuclease H-like domain-containing protein [Helianthus
            annuus]
          Length = 1532

 Score =  852 bits (2202), Expect = 0.0
 Identities = 409/522 (78%), Positives = 462/522 (88%)
 Frame = -3

Query: 1571 SLYSEKIPSNTEEALKSENWKKAMDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYK 1392
            SLYSE+IP+NTE+ALKS +WKKAM+EEM+AL KN TWEKC L   KK VGCRW+FTIKYK
Sbjct: 1011 SLYSEEIPTNTEQALKSRHWKKAMEEEMKALTKNNTWEKCALLVGKKTVGCRWVFTIKYK 1070

Query: 1391 PDGTIDRYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNA 1212
            PDGTI+RYKARLVAKGYTQTYGIDYSETFSPVAKI+TIRVLFS+AAN+GWPLHQFDVKNA
Sbjct: 1071 PDGTIERYKARLVAKGYTQTYGIDYSETFSPVAKINTIRVLFSVAANKGWPLHQFDVKNA 1130

Query: 1211 FLHGDLKEEVYMEAPPGFSGGFKTREVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFKQS 1032
            FLHG+LKEEVYMEAP GF+  F  REVCRLKKSLYGLKQSPRAWFGRFT+AMK YGFKQS
Sbjct: 1131 FLHGELKEEVYMEAPHGFTVNFGEREVCRLKKSLYGLKQSPRAWFGRFTLAMKNYGFKQS 1190

Query: 1031 NSDHTLFLKRRQEYVTCLIIYVDDIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFLGI 852
            NSDHTLFLK+R   +TCLIIYVDD+IITGND++EI KLK+ LFTEFEMKDLGRLKYFLGI
Sbjct: 1191 NSDHTLFLKQRNNLITCLIIYVDDMIITGNDKEEITKLKKNLFTEFEMKDLGRLKYFLGI 1250

Query: 851  EVLRSQHGIFICQKKYILDLLTETGMLDCKPAETPMIANQKLYMEPEAELADKVRYQRMV 672
            EVLRS+ GIF+CQKKY+LDLL ETG++DCKPA+TPMIANQKLY+E  AE AD+ RYQR+V
Sbjct: 1251 EVLRSKQGIFMCQKKYVLDLLAETGLIDCKPADTPMIANQKLYIEETAEPADRERYQRIV 1310

Query: 671  GKLIYLSHTRPDIAYAVGVVSQFMHQPQKAHMDAVERIIEYLKGTPGYGVLFESNGHLDI 492
            GKLIYLSHTRPDIAYAVGV+SQFMHQPQ AHMDAV RI+ YLKGT G+GVLF+ NGHL  
Sbjct: 1311 GKLIYLSHTRPDIAYAVGVISQFMHQPQSAHMDAVFRILRYLKGTVGHGVLFKPNGHLGT 1370

Query: 491  QVYTDADWAGDKGKRRSTSGYFSLVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAEVL 312
            Q+YTDADWAGDKG RRSTSGYF+LVGGNLVTW           SAEAE+RGI++G+ EVL
Sbjct: 1371 QLYTDADWAGDKGNRRSTSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIAKGITEVL 1430

Query: 311  WIRKLLTEVGFRPKRATQVFCDNKAAIQISENPVQHDRTKHVEIDRHFIKEKLEAGIIEL 132
            W+R+LLTE+GF P+  +++  DNKAAIQISENPVQHDRTKH+E+DRHFIKEK EA I+ L
Sbjct: 1431 WVRRLLTEIGFPPQETSKITTDNKAAIQISENPVQHDRTKHIEVDRHFIKEKFEAEIVSL 1490

Query: 131  PFVRTEDQLADILTKAVGTRIMQDCLGKLNFGDPTIQLEGEC 6
             FV +E+QLADILTKAV  RI+  CL KLNFG+PTIQLEGEC
Sbjct: 1491 SFVPSEEQLADILTKAVNERILHKCLDKLNFGNPTIQLEGEC 1532


>dbj|BAK64102.1| gag-pol polyprotein [Eustoma exaltatum subsp. russellianum]
          Length = 1591

 Score =  754 bits (1946), Expect = 0.0
 Identities = 368/519 (70%), Positives = 427/519 (82%)
 Frame = -3

Query: 1562 SEKIPSNTEEALKSENWKKAMDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYKPDG 1383
            SEKIP   +EA    NW+ AM  EM+AL KN TWE+C LP  K+ VGCRW+FT+KYK DG
Sbjct: 1073 SEKIPRTVDEACSQSNWRDAMIMEMDALNKNNTWERCQLPPGKRTVGCRWVFTVKYKADG 1132

Query: 1382 TIDRYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNAFLH 1203
            TI+R+KARLVAKGYTQTYG+DYSETFSPVA+IDTIRVLF+IAA + WPLHQFDVKNAFLH
Sbjct: 1133 TIERHKARLVAKGYTQTYGVDYSETFSPVARIDTIRVLFAIAATENWPLHQFDVKNAFLH 1192

Query: 1202 GDLKEEVYMEAPPGFSGGFKTREVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFKQSNSD 1023
            G LKEEV+M+ PPGFS  F   +VC+L ++LYGLKQSPRAWFGRFT AMKK G++QSN+D
Sbjct: 1193 GTLKEEVFMDPPPGFSKEFLPGQVCKLNRALYGLKQSPRAWFGRFTQAMKKDGYRQSNAD 1252

Query: 1022 HTLFLKRRQEYVTCLIIYVDDIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFLGIEVL 843
            HTLF+KR+   VTCLIIYVDD+IITGND  EI +L++ LFT+FEMKDLG LKYFLGIEVL
Sbjct: 1253 HTLFIKRQGSLVTCLIIYVDDMIITGNDANEISRLRDYLFTQFEMKDLGGLKYFLGIEVL 1312

Query: 842  RSQHGIFICQKKYILDLLTETGMLDCKPAETPMIANQKLYMEPEAELADKVRYQRMVGKL 663
            RS  GI+I Q+KYILDLLTE G+LD KPA+TPM+ N KL +   A  AD+ +YQR+VGKL
Sbjct: 1313 RSAEGIYISQRKYILDLLTEVGLLDAKPADTPMVQNHKLDIVQGAASADREQYQRLVGKL 1372

Query: 662  IYLSHTRPDIAYAVGVVSQFMHQPQKAHMDAVERIIEYLKGTPGYGVLFESNGHLDIQVY 483
            IYLSHTRPDIAYAVGVVSQFMH PQK H++AV RI+ YLKGTPG G+LF++NGHL+I+ Y
Sbjct: 1373 IYLSHTRPDIAYAVGVVSQFMHSPQKHHLEAVFRIMRYLKGTPGRGLLFKNNGHLNIEAY 1432

Query: 482  TDADWAGDKGKRRSTSGYFSLVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAEVLWIR 303
            TDADWAG +  RRSTSGYF+LVGGN+VTW           SAEAEYRGI +G++EVLWIR
Sbjct: 1433 TDADWAGSQIDRRSTSGYFTLVGGNVVTWRSKKQKVVALSSAEAEYRGIVKGVSEVLWIR 1492

Query: 302  KLLTEVGFRPKRATQVFCDNKAAIQISENPVQHDRTKHVEIDRHFIKEKLEAGIIELPFV 123
            KLL E+GF     T + CDNKA+I ISENPVQHDRTKHVEIDRHF+KEK+E GII LP V
Sbjct: 1493 KLLQELGFPVTDPTCLMCDNKASISISENPVQHDRTKHVEIDRHFVKEKIEDGIIALPHV 1552

Query: 122  RTEDQLADILTKAVGTRIMQDCLGKLNFGDPTIQLEGEC 6
            R+EDQLADILTKAV  RI +  L KLN  DPTIQLEGEC
Sbjct: 1553 RSEDQLADILTKAVNGRIFEFILRKLNIVDPTIQLEGEC 1591


>ref|XP_015084225.1| PREDICTED: uncharacterized protein LOC107027628 [Solanum pennellii]
          Length = 2107

 Score =  744 bits (1922), Expect = 0.0
 Identities = 363/522 (69%), Positives = 424/522 (81%)
 Frame = -3

Query: 1571 SLYSEKIPSNTEEALKSENWKKAMDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYK 1392
            SLYS  IP   EEA + E W++AM+ E  AL KN TWEKC+LP  KK VGCRW+F+IK++
Sbjct: 1000 SLYSTNIPRTVEEAFEDEKWRQAMENEYVALEKNHTWEKCILPKGKKKVGCRWVFSIKHR 1059

Query: 1391 PDGTIDRYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNA 1212
             DGTI+RYKARLVAKGYTQT+GIDYSETFSPVAKIDTIRVLFS+AAN+ WPL+QFDVKNA
Sbjct: 1060 ADGTIERYKARLVAKGYTQTFGIDYSETFSPVAKIDTIRVLFSVAANKDWPLYQFDVKNA 1119

Query: 1211 FLHGDLKEEVYMEAPPGFSGGFKTREVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFKQS 1032
            FLHG ++EEVYME PPG+S  FK  E C+LKK+LYGLKQSPRAWFGRFT AMKK+G++QS
Sbjct: 1120 FLHGSIEEEVYMEPPPGYSHDFKDGEGCKLKKALYGLKQSPRAWFGRFTKAMKKFGYRQS 1179

Query: 1031 NSDHTLFLKRRQEYVTCLIIYVDDIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFLGI 852
            NSDHTLF+K   + +TCLIIYVDD+IITGNDE+EI  LK  LF EFEMKDLG LKYFLGI
Sbjct: 1180 NSDHTLFIKGANQKITCLIIYVDDMIITGNDEEEIVTLKGKLFQEFEMKDLGNLKYFLGI 1239

Query: 851  EVLRSQHGIFICQKKYILDLLTETGMLDCKPAETPMIANQKLYMEPEAELADKVRYQRMV 672
            EVLRS  GIFI Q+KYILDLLTETGML  KPA+TP+IAN  L +   A+  DK +YQ++V
Sbjct: 1240 EVLRSTQGIFIHQRKYILDLLTETGMLGSKPADTPIIANHGLQVIEGAKATDKEQYQKIV 1299

Query: 671  GKLIYLSHTRPDIAYAVGVVSQFMHQPQKAHMDAVERIIEYLKGTPGYGVLFESNGHLDI 492
            GKLIYL+HTRPDIAYAVG+VS+FMH PQ  HM AV RI+ YLKGT   G+ F  N  LDI
Sbjct: 1300 GKLIYLAHTRPDIAYAVGIVSRFMHLPQIHHMTAVMRILRYLKGTSSTGIYFGKNDSLDI 1359

Query: 491  QVYTDADWAGDKGKRRSTSGYFSLVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAEVL 312
              YTDADWAGD+ +R+STSGYF+LVGGNLVTW           SAEAE+RGI +G+ E+L
Sbjct: 1360 TAYTDADWAGDRDERKSTSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIVKGITEIL 1419

Query: 311  WIRKLLTEVGFRPKRATQVFCDNKAAIQISENPVQHDRTKHVEIDRHFIKEKLEAGIIEL 132
            WIRKLL E+GF  K A ++FCDNKAAI IS NPVQHDRTKHVE+DRHFIK+KLE  +I+L
Sbjct: 1420 WIRKLLNELGFPQKTACKLFCDNKAAISISGNPVQHDRTKHVEVDRHFIKDKLEDKVIKL 1479

Query: 131  PFVRTEDQLADILTKAVGTRIMQDCLGKLNFGDPTIQLEGEC 6
            PFVR++DQLADILTKAV T    + L KL+ G+P+ QLEGEC
Sbjct: 1480 PFVRSKDQLADILTKAVSTEAFSNVLRKLSIGNPSAQLEGEC 1521


>ref|XP_015084159.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107027526
            [Solanum pennellii]
          Length = 2329

 Score =  744 bits (1920), Expect = 0.0
 Identities = 363/522 (69%), Positives = 424/522 (81%)
 Frame = -3

Query: 1571 SLYSEKIPSNTEEALKSENWKKAMDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYK 1392
            SLYS  IP   EEA + E W++AM+ E  AL KN TWEKC+LP  KK VGCRW+F+IK++
Sbjct: 996  SLYSTNIPRTVEEAFEDEKWRQAMENEYVALEKNHTWEKCILPKGKKKVGCRWVFSIKHR 1055

Query: 1391 PDGTIDRYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNA 1212
             DGTI+RYKARLVAKGYTQT+GIDYSETFSPVAKIDTIRVLFS+AAN+ WPL+QFDVKNA
Sbjct: 1056 ADGTIERYKARLVAKGYTQTFGIDYSETFSPVAKIDTIRVLFSVAANKDWPLYQFDVKNA 1115

Query: 1211 FLHGDLKEEVYMEAPPGFSGGFKTREVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFKQS 1032
            FLHG ++EEVYME PPG+S  FK  E C+LKK+LYGLKQSPRAWFGRFT AMKK+G++QS
Sbjct: 1116 FLHGSIEEEVYMEPPPGYSHDFKDGEGCKLKKALYGLKQSPRAWFGRFTKAMKKFGYRQS 1175

Query: 1031 NSDHTLFLKRRQEYVTCLIIYVDDIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFLGI 852
            NSDHTLF+K   + +TCLIIYVDD+IITGNDE+EI  LK  LF EFEMKDLG LKYFLGI
Sbjct: 1176 NSDHTLFIKGANQKITCLIIYVDDMIITGNDEEEIVTLKGKLFQEFEMKDLGNLKYFLGI 1235

Query: 851  EVLRSQHGIFICQKKYILDLLTETGMLDCKPAETPMIANQKLYMEPEAELADKVRYQRMV 672
            EVLRS  GIFI Q+KYILDLLTETGML  KPA+TP++AN  L +   A+  DK +YQ++V
Sbjct: 1236 EVLRSTQGIFIHQRKYILDLLTETGMLGSKPADTPIVANHGLQVIEGAKATDKEQYQKIV 1295

Query: 671  GKLIYLSHTRPDIAYAVGVVSQFMHQPQKAHMDAVERIIEYLKGTPGYGVLFESNGHLDI 492
            GKLIYL+HTRPDIAYAVGVVS+FMH PQ  HM AV RI+ YLKGT   G+ F  N  LDI
Sbjct: 1296 GKLIYLAHTRPDIAYAVGVVSRFMHLPQIHHMTAVMRILRYLKGTSSTGIYFGKNDSLDI 1355

Query: 491  QVYTDADWAGDKGKRRSTSGYFSLVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAEVL 312
              YTDADWAGD+ +R+STSGYF+LVGGNLVTW           SAEAE+RGI +G+ E+L
Sbjct: 1356 IAYTDADWAGDRDERKSTSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIVKGITEIL 1415

Query: 311  WIRKLLTEVGFRPKRATQVFCDNKAAIQISENPVQHDRTKHVEIDRHFIKEKLEAGIIEL 132
            WIRKLL E+GF  K A ++FCDNKAAI IS NPVQHDRTKHVE+DRHFIK+KLE  +I+L
Sbjct: 1416 WIRKLLNELGFPQKTACKLFCDNKAAISISGNPVQHDRTKHVEVDRHFIKDKLEDKVIKL 1475

Query: 131  PFVRTEDQLADILTKAVGTRIMQDCLGKLNFGDPTIQLEGEC 6
            PFVR++DQLADILTKAV T    + L KL+ G+P+ QLEGEC
Sbjct: 1476 PFVRSKDQLADILTKAVSTEAFSNVLRKLSIGNPSAQLEGEC 1517


>gb|PRQ34236.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 693

 Score =  688 bits (1775), Expect = 0.0
 Identities = 328/510 (64%), Positives = 400/510 (78%)
 Frame = -3

Query: 1562 SEKIPSNTEEALKSENWKKAMDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYKPDG 1383
            S  IP+  ++AL+   W KAM+EEMEAL+KN TWE   LP  KK VGC+W++TIK+  DG
Sbjct: 179  SVSIPNKVQDALRDPKWSKAMEEEMEALQKNNTWELIGLPKGKKTVGCKWVYTIKHDADG 238

Query: 1382 TIDRYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNAFLH 1203
            ++ RYKARLVAKG+TQTYG+DY ETF+PVAKI+TIRVL S+AAN  WPL Q DVKNAFLH
Sbjct: 239  SVSRYKARLVAKGFTQTYGVDYDETFAPVAKINTIRVLLSLAANLDWPLKQLDVKNAFLH 298

Query: 1202 GDLKEEVYMEAPPGFSGGFKTREVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFKQSNSD 1023
            GDL EEVYM  PPG+    KT  VCRLKKSLYGLKQSPRAWFGRFT AMK++G+KQSNSD
Sbjct: 299  GDLAEEVYMSLPPGYETTNKTDVVCRLKKSLYGLKQSPRAWFGRFTQAMKRFGYKQSNSD 358

Query: 1022 HTLFLKRRQEYVTCLIIYVDDIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFLGIEVL 843
            HTLFLK ++  VT LIIYVDD++ITG+D +EI++L++ L +EFEMKDLG L+YFLGIEV 
Sbjct: 359  HTLFLKHQKGKVTVLIIYVDDMVITGDDREEIRRLQQQLASEFEMKDLGDLRYFLGIEVA 418

Query: 842  RSQHGIFICQKKYILDLLTETGMLDCKPAETPMIANQKLYMEPEAELADKVRYQRMVGKL 663
            R    IF+CQ+KY+LDLL+ETGMLDC+PA+TP+  N +L   P+    D+ RYQR+VGKL
Sbjct: 419  RGSSSIFLCQRKYVLDLLSETGMLDCRPADTPIEQNHRLAEYPDQVPTDRARYQRLVGKL 478

Query: 662  IYLSHTRPDIAYAVGVVSQFMHQPQKAHMDAVERIIEYLKGTPGYGVLFESNGHLDIQVY 483
            IYL HTRPD+AYAV VVSQFMH P + HM+AV RI+ YLK  PG G++F  + +L++  Y
Sbjct: 479  IYLGHTRPDLAYAVSVVSQFMHNPSEDHMEAVVRILRYLKRAPGKGLMFSKHHYLEVSGY 538

Query: 482  TDADWAGDKGKRRSTSGYFSLVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAEVLWIR 303
            TDADWAG    RRSTSGYF+ VGGNLVTW           SAEAEYRG++ G+ E+LW+R
Sbjct: 539  TDADWAGCITDRRSTSGYFTFVGGNLVTWKSKKQKVVARSSAEAEYRGMAHGVCELLWLR 598

Query: 302  KLLTEVGFRPKRATQVFCDNKAAIQISENPVQHDRTKHVEIDRHFIKEKLEAGIIELPFV 123
             LL ++GF+PKRA ++FCDNKAAI+IS NPVQHDRTKHVE+DRHFIKEKL+A +I  PFV
Sbjct: 599  NLLRDLGFKPKRAMELFCDNKAAIEISHNPVQHDRTKHVEVDRHFIKEKLDANLIAFPFV 658

Query: 122  RTEDQLADILTKAVGTRIMQDCLGKLNFGD 33
             TE+QLAD+LTK V  +   D L KL   D
Sbjct: 659  PTEEQLADVLTKGVSVKAFHDSLDKLGIRD 688


>gb|PNX71168.1| beta-galactosidase [Trifolium pratense]
          Length = 667

 Score =  685 bits (1768), Expect = 0.0
 Identities = 332/514 (64%), Positives = 401/514 (78%), Gaps = 2/514 (0%)
 Frame = -3

Query: 1568 LYSEKIPSNTEEALKSENWKKAMDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYKP 1389
            L S  IPSN +EAL    W +AM EEM AL KN TW+   LP  KK VGCRW+FTIK+K 
Sbjct: 152  LSSISIPSNVQEALADPKWTEAMAEEMTALEKNNTWDLVTLPRGKKTVGCRWVFTIKHKA 211

Query: 1388 DGTIDRYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNAF 1209
            DGTIDRYKARLVAKGYTQ+YG+DY ETF+PVAK++T+R+L S+AANQ WPL QFDVKNAF
Sbjct: 212  DGTIDRYKARLVAKGYTQSYGVDYQETFAPVAKLNTVRILLSVAANQDWPLLQFDVKNAF 271

Query: 1208 LHGDLKEEVYMEAPPGF--SGGFKTREVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFKQ 1035
            LHG++ EE+YM+ PPG   S G K   VC+LKK+LYGLKQSPRAWFGRFT +MK +G+K 
Sbjct: 272  LHGEILEEIYMDTPPGMVDSNGSK---VCKLKKALYGLKQSPRAWFGRFTKSMKTFGYKA 328

Query: 1034 SNSDHTLFLKRRQEYVTCLIIYVDDIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFLG 855
            SNSDHTLFLK+ +  +T LIIYVDD+I+TGND+ EI  L++ L +EFEMK LG LKYFLG
Sbjct: 329  SNSDHTLFLKKGEGKITALIIYVDDMIVTGNDQDEISSLQKYLTSEFEMKQLGDLKYFLG 388

Query: 854  IEVLRSQHGIFICQKKYILDLLTETGMLDCKPAETPMIANQKLYMEPEAELADKVRYQRM 675
            IEV RS+HGIF+CQ+KY LDLL+ETG+L  KPAETP+  N KL+    + + DK RYQ +
Sbjct: 389  IEVARSKHGIFLCQRKYTLDLLSETGLLASKPAETPIEQNHKLFHCLNSNITDKGRYQSL 448

Query: 674  VGKLIYLSHTRPDIAYAVGVVSQFMHQPQKAHMDAVERIIEYLKGTPGYGVLFESNGHLD 495
            VGKLIYLSHTRPDI YAV VVSQFMH P+K HMDAVERI+ YLK TPG G+LF +NGHL 
Sbjct: 449  VGKLIYLSHTRPDITYAVNVVSQFMHDPRKPHMDAVERILRYLKSTPGKGILFSNNGHLR 508

Query: 494  IQVYTDADWAGDKGKRRSTSGYFSLVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAEV 315
            ++ YTDADWAG    RRSTSGYF+ VGGNLVTW           SAEAE+RG++ G+ E+
Sbjct: 509  VEGYTDADWAGSADDRRSTSGYFTFVGGNLVTWRSKKQPVVARSSAEAEFRGMALGMCEL 568

Query: 314  LWIRKLLTEVGFRPKRATQVFCDNKAAIQISENPVQHDRTKHVEIDRHFIKEKLEAGIIE 135
            LW++ +L+++ F PK A  + CDN +AI+I+ NPVQHDRTKHVEIDRHFIKEKLEAG I 
Sbjct: 569  LWVKSVLSDLDFEPKEAMSLHCDNTSAIEIAHNPVQHDRTKHVEIDRHFIKEKLEAGTIV 628

Query: 134  LPFVRTEDQLADILTKAVGTRIMQDCLGKLNFGD 33
             PFVR+E QLAD+LTK V +++  + L KL   D
Sbjct: 629  FPFVRSEQQLADMLTKGVASKVFNESLLKLGMCD 662


>gb|OTG30285.1| putative reverse transcriptase, RNA-dependent DNA polymerase
            [Helianthus annuus]
          Length = 430

 Score =  676 bits (1743), Expect = 0.0
 Identities = 324/428 (75%), Positives = 368/428 (85%)
 Frame = -3

Query: 1289 IDTIRVLFSIAANQGWPLHQFDVKNAFLHGDLKEEVYMEAPPGFSGGFKTREVCRLKKSL 1110
            +DTIRVLFS+AAN+ WPLHQFDV NAFLHGDL EEVYM+APPGFSGGFK  EVCRLKKSL
Sbjct: 1    MDTIRVLFSVAANKEWPLHQFDVTNAFLHGDLTEEVYMDAPPGFSGGFKEGEVCRLKKSL 60

Query: 1109 YGLKQSPRAWFGRFTIAMKKYGFKQSNSDHTLFLKRRQEYVTCLIIYVDDIIITGNDEQE 930
            YGLKQSPRAWFG+FT+AMK+YG+ QSN+DHTLFLKRR   VTCLIIYVDD+IITG+D +E
Sbjct: 61   YGLKQSPRAWFGKFTLAMKEYGYHQSNADHTLFLKRRNGLVTCLIIYVDDMIITGDDTEE 120

Query: 929  IKKLKEGLFTEFEMKDLGRLKYFLGIEVLRSQHGIFICQKKYILDLLTETGMLDCKPAET 750
            I +LK  LF++FEMKDLG LKYFLGIEVLRS+ GIFICQKKY+LDLL ETG++DCKPA+T
Sbjct: 121  IARLKRNLFSKFEMKDLGNLKYFLGIEVLRSKQGIFICQKKYVLDLLAETGLIDCKPADT 180

Query: 749  PMIANQKLYMEPEAELADKVRYQRMVGKLIYLSHTRPDIAYAVGVVSQFMHQPQKAHMDA 570
            PM+ N  L+ME   ELADK RYQR+VGKLIYLSHTRPDIAYAVGVVSQFMHQPQ AHM+A
Sbjct: 181  PMVVNHNLHMELNGELADKGRYQRLVGKLIYLSHTRPDIAYAVGVVSQFMHQPQVAHMEA 240

Query: 569  VERIIEYLKGTPGYGVLFESNGHLDIQVYTDADWAGDKGKRRSTSGYFSLVGGNLVTWXX 390
             +RI+ YLKGT G+GVLF++NGHL +++YTDADWAGDKG RRSTSGYFSLVGGNLVTW  
Sbjct: 241  AQRILRYLKGTAGHGVLFKTNGHLKVELYTDADWAGDKGNRRSTSGYFSLVGGNLVTWRS 300

Query: 389  XXXXXXXXXSAEAEYRGISRGLAEVLWIRKLLTEVGFRPKRATQVFCDNKAAIQISENPV 210
                     SAEAE+RGI+RGL+EVLWIRKLL ++GF  K  ++V CDN AAIQISENPV
Sbjct: 301  KKQKVVALSSAEAEFRGIARGLSEVLWIRKLLEDIGFSQKGPSKVMCDNTAAIQISENPV 360

Query: 209  QHDRTKHVEIDRHFIKEKLEAGIIELPFVRTEDQLADILTKAVGTRIMQDCLGKLNFGDP 30
            QHDRTKHVE+DRHFIKEKLE GIIELP+V ++DQLADILTKAV       CL KL+  DP
Sbjct: 361  QHDRTKHVEVDRHFIKEKLEGGIIELPYVASKDQLADILTKAVNGNAFSSCLSKLSISDP 420

Query: 29   TIQLEGEC 6
            T QLEGEC
Sbjct: 421  TTQLEGEC 428


>gb|OTG04913.1| putative reverse transcriptase, RNA-dependent DNA polymerase
            [Helianthus annuus]
          Length = 473

 Score =  670 bits (1729), Expect = 0.0
 Identities = 317/420 (75%), Positives = 368/420 (87%)
 Frame = -3

Query: 1571 SLYSEKIPSNTEEALKSENWKKAMDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYK 1392
            SLY+E+IP++ +EA   + W++AM+ EM AL KN TWEKC LP  KK VGCRW+++IKYK
Sbjct: 54   SLYNEQIPTSVKEAQGKKKWEEAMEVEMRALMKNNTWEKCSLPKGKKTVGCRWVYSIKYK 113

Query: 1391 PDGTIDRYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNA 1212
            PDG+I RYKARLVAKGYTQTYGIDYSETFSPVAK+DTIRVLFS+AAN+ WPLHQFDV NA
Sbjct: 114  PDGSIGRYKARLVAKGYTQTYGIDYSETFSPVAKMDTIRVLFSVAANKDWPLHQFDVTNA 173

Query: 1211 FLHGDLKEEVYMEAPPGFSGGFKTREVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFKQS 1032
            FLHGDL EEVYMEAPPGFSGGFK  EVCRLKKSLYGLKQSPRAWFG+FT+AMK+YG++QS
Sbjct: 174  FLHGDLTEEVYMEAPPGFSGGFKDGEVCRLKKSLYGLKQSPRAWFGKFTLAMKEYGYRQS 233

Query: 1031 NSDHTLFLKRRQEYVTCLIIYVDDIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFLGI 852
            N+DHTLFLKRR   VTCLIIYVDD+IITG+D +EI +LK  LF++FEMKDLG LKYFLGI
Sbjct: 234  NADHTLFLKRRNGLVTCLIIYVDDMIITGDDVEEIAQLKRNLFSKFEMKDLGNLKYFLGI 293

Query: 851  EVLRSQHGIFICQKKYILDLLTETGMLDCKPAETPMIANQKLYMEPEAELADKVRYQRMV 672
            EVLRS+ GIFICQKKY+LDLL ETG++DCKPA+TPM+ N  L+ME + +LAD+ RYQR+V
Sbjct: 294  EVLRSKRGIFICQKKYVLDLLAETGLIDCKPADTPMVVNHNLHMELDGKLADRERYQRLV 353

Query: 671  GKLIYLSHTRPDIAYAVGVVSQFMHQPQKAHMDAVERIIEYLKGTPGYGVLFESNGHLDI 492
            GKLIYLSHTRPDIAYAVGVVSQFMHQPQ AHM+A +RI+ YLKGT G+GVLF++NGHL +
Sbjct: 354  GKLIYLSHTRPDIAYAVGVVSQFMHQPQVAHMEAAQRILRYLKGTAGHGVLFKTNGHLTV 413

Query: 491  QVYTDADWAGDKGKRRSTSGYFSLVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAEVL 312
            ++YTDADWAGDKG RRSTSGYFSLVGGNLVTW           SAEAE+RGI+RGL+EVL
Sbjct: 414  ELYTDADWAGDKGNRRSTSGYFSLVGGNLVTWRSKKQKVVALSSAEAEFRGIARGLSEVL 473


>gb|PRQ60568.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 697

 Score =  679 bits (1751), Expect = 0.0
 Identities = 329/507 (64%), Positives = 395/507 (77%)
 Frame = -3

Query: 1553 IPSNTEEALKSENWKKAMDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYKPDGTID 1374
            IP+  ++AL    W KAM+EEMEAL+K+ TWE    P  K+ VGCRWI+T+KY  DGT+D
Sbjct: 186  IPNKVQDALADRKWTKAMEEEMEALQKSQTWELVPKPAGKRIVGCRWIYTLKYAADGTLD 245

Query: 1373 RYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNAFLHGDL 1194
            RYKARLVAKGYTQTYGIDY ETF+PVAK++T+RVL S+AAN  WPL QFDVKNAFLHGDL
Sbjct: 246  RYKARLVAKGYTQTYGIDYQETFAPVAKMNTVRVLLSLAANLDWPLKQFDVKNAFLHGDL 305

Query: 1193 KEEVYMEAPPGFSGGFKTREVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFKQSNSDHTL 1014
            KEEVYM+ PPG+S   +   VC+LKKSLYGLKQSPRAWFGRF+ +MK++G+KQSNSDHTL
Sbjct: 306  KEEVYMDLPPGYSLPSQAGMVCKLKKSLYGLKQSPRAWFGRFSQSMKQFGYKQSNSDHTL 365

Query: 1013 FLKRRQEYVTCLIIYVDDIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFLGIEVLRSQ 834
            FLK R++ +T LIIYVDD+I+TGND +E+KKL+  L + FEMKDLG LKYFLGIEV RS+
Sbjct: 366  FLKHRKDKLTALIIYVDDMIVTGNDPEEVKKLEAHLSSVFEMKDLGGLKYFLGIEVARSK 425

Query: 833  HGIFICQKKYILDLLTETGMLDCKPAETPMIANQKLYMEPEAELADKVRYQRMVGKLIYL 654
             GI + Q+KY++DLL ETG+L C+PA+TPM  N KL   P+    +K RYQR+VGKLIYL
Sbjct: 426  EGISLSQRKYVVDLLIETGLLACQPADTPMEQNHKLAEYPDQVPTNKERYQRLVGKLIYL 485

Query: 653  SHTRPDIAYAVGVVSQFMHQPQKAHMDAVERIIEYLKGTPGYGVLFESNGHLDIQVYTDA 474
            SHTRPDIAYAV VVSQFMH P + HM AV RI+ YLK  PG G++F  N H DI  YTDA
Sbjct: 486  SHTRPDIAYAVSVVSQFMHAPSEDHMHAVHRILRYLKTNPGKGIMFSKNNHTDIAGYTDA 545

Query: 473  DWAGDKGKRRSTSGYFSLVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAEVLWIRKLL 294
            DWAG    RRSTSGYF+ VGGNLVTW           SAEAEYRG++ G+ E+LW+R L+
Sbjct: 546  DWAGSITDRRSTSGYFTFVGGNLVTWRSKKQKVVARSSAEAEYRGMAHGVCEMLWLRHLM 605

Query: 293  TEVGFRPKRATQVFCDNKAAIQISENPVQHDRTKHVEIDRHFIKEKLEAGIIELPFVRTE 114
             ++GF+PK A  ++CDNKAAI I+ NPVQHDRTKHVE+DRHFIKEKLE+  I +P V TE
Sbjct: 606  KDLGFKPKHAMNLYCDNKAAIDIAHNPVQHDRTKHVEVDRHFIKEKLESKTINMPHVCTE 665

Query: 113  DQLADILTKAVGTRIMQDCLGKLNFGD 33
            DQLADILTKAV  ++    L KL   D
Sbjct: 666  DQLADILTKAVSGKVFHSSLDKLGMRD 692


>gb|KYP39293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 500

 Score =  666 bits (1718), Expect = 0.0
 Identities = 321/495 (64%), Positives = 393/495 (79%), Gaps = 3/495 (0%)
 Frame = -3

Query: 1508 KAMDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYKPDGTIDRYKARLVAKGYTQTY 1329
            +AM+EEMEAL KN TW    LP  KK VGC+W+F+IKYK DG+I+RYKARLVAKG+TQT+
Sbjct: 1    QAMNEEMEALNKNATWTLVPLPQGKKTVGCKWVFSIKYKADGSIERYKARLVAKGFTQTH 60

Query: 1328 GIDYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNAFLHGDLKEEVYMEAPPGF--- 1158
            G+DY ETFSPVAK+  +RVL S+AAN  WPLHQ DVKNAFLHG LKEE+YM+ PPG+   
Sbjct: 61   GVDYQETFSPVAKLSIVRVLLSLAANLDWPLHQLDVKNAFLHGHLKEEIYMDIPPGYMEK 120

Query: 1157 SGGFKTREVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFKQSNSDHTLFLKRRQEYVTCL 978
            SG   T+ VC+L+++LYGLKQSPR WFGR  +AMKKYGF+QSN+DHTLFLK RQ  +T L
Sbjct: 121  SGKSGTKVVCKLQRTLYGLKQSPREWFGRLNLAMKKYGFQQSNADHTLFLKHRQGKITAL 180

Query: 977  IIYVDDIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFLGIEVLRSQHGIFICQKKYIL 798
            I+YVDD+IITG+D +EI +L+  L TEFEMK+LG LKYFLGIEV RS+ GIF+ Q+KYIL
Sbjct: 181  IVYVDDMIITGDDSEEITRLQRKLGTEFEMKNLGGLKYFLGIEVARSKQGIFLSQRKYIL 240

Query: 797  DLLTETGMLDCKPAETPMIANQKLYMEPEAELADKVRYQRMVGKLIYLSHTRPDIAYAVG 618
            DLL+E G+LDCKP +TP++ N +L    +   ++K RYQR+VGKLIYLSHTRPDIAYAV 
Sbjct: 241  DLLSEVGLLDCKPVDTPIVQNHQLGEYLDQVPSEKGRYQRVVGKLIYLSHTRPDIAYAVS 300

Query: 617  VVSQFMHQPQKAHMDAVERIIEYLKGTPGYGVLFESNGHLDIQVYTDADWAGDKGKRRST 438
            VVSQFMH P   HM AV RI++YLK +PG G++F  N HL ++ YTDADWAGD   RRST
Sbjct: 301  VVSQFMHNPSTDHMKAVMRILQYLKSSPGKGLMFTKNDHLQVEGYTDADWAGDTTNRRST 360

Query: 437  SGYFSLVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAEVLWIRKLLTEVGFRPKRATQ 258
            SGYF+ VGGNLVTW           SAEAE+RG+++GL E+LWIR+LLTE+GF P  A +
Sbjct: 361  SGYFTFVGGNLVTWRSKKQKVVSLSSAEAEFRGMAKGLCELLWIRRLLTEIGFTPSCAMK 420

Query: 257  VFCDNKAAIQISENPVQHDRTKHVEIDRHFIKEKLEAGIIELPFVRTEDQLADILTKAVG 78
            +FCDNKAAI I+ NPVQHDRTKHVE+DRHFIK+ LE  II+ PFV++E+QLADILTKAV 
Sbjct: 421  LFCDNKAAIAIAHNPVQHDRTKHVEVDRHFIKQNLETKIIQFPFVKSEEQLADILTKAVC 480

Query: 77   TRIMQDCLGKLNFGD 33
            ++   + LGKL   D
Sbjct: 481  SKNFSNSLGKLGMRD 495


>gb|PRQ60115.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1014

 Score =  684 bits (1766), Expect = 0.0
 Identities = 330/507 (65%), Positives = 398/507 (78%)
 Frame = -3

Query: 1553 IPSNTEEALKSENWKKAMDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYKPDGTID 1374
            IP+  ++AL +  W KAM++EMEAL+KN TWE    P  K+ VGCRWI+T+KY  DGT+D
Sbjct: 503  IPNKVQDALANPKWTKAMEDEMEALQKNDTWELVPKPAGKRAVGCRWIYTLKYAADGTLD 562

Query: 1373 RYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNAFLHGDL 1194
            RYKARLVAKGYTQTYGIDY ETF+PVAK++T+RVL S+AAN  WPL QFDVKNAFLHGDL
Sbjct: 563  RYKARLVAKGYTQTYGIDYQETFAPVAKMNTVRVLLSLAANLDWPLKQFDVKNAFLHGDL 622

Query: 1193 KEEVYMEAPPGFSGGFKTREVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFKQSNSDHTL 1014
            KEEVYM+ PPG+S   +   VC+LKKSLYGLKQSPRAWFGRF+ +MK++G+KQSNSDHTL
Sbjct: 623  KEEVYMDLPPGYSLPSQAGMVCKLKKSLYGLKQSPRAWFGRFSQSMKQFGYKQSNSDHTL 682

Query: 1013 FLKRRQEYVTCLIIYVDDIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFLGIEVLRSQ 834
            FLK R++ +T LIIYVDD+I+TGND +E+KKL+  L + FEMKDLG LKYFLGIEV RS+
Sbjct: 683  FLKHRKDKLTALIIYVDDMIVTGNDPEEVKKLEAHLSSVFEMKDLGGLKYFLGIEVARSK 742

Query: 833  HGIFICQKKYILDLLTETGMLDCKPAETPMIANQKLYMEPEAELADKVRYQRMVGKLIYL 654
             GI + Q+KY++DLL ETG+L C+PA+TPM  N KL   P+    +K RYQR+VGKLIYL
Sbjct: 743  EGIALSQRKYVVDLLIETGLLACRPADTPMEQNHKLAEYPDQVPTNKERYQRLVGKLIYL 802

Query: 653  SHTRPDIAYAVGVVSQFMHQPQKAHMDAVERIIEYLKGTPGYGVLFESNGHLDIQVYTDA 474
            SHTRPDIAYAV VVSQFMH P + HM+AV RI+ YLK  PG G++F  N H DI  YTDA
Sbjct: 803  SHTRPDIAYAVSVVSQFMHAPSEDHMEAVHRILRYLKTNPGKGIMFSKNNHTDIAGYTDA 862

Query: 473  DWAGDKGKRRSTSGYFSLVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAEVLWIRKLL 294
            DWAG    RRSTSGYF+ VGGNLVTW           SAEAEYRG++ G+ E+LW+R L+
Sbjct: 863  DWAGSITDRRSTSGYFTFVGGNLVTWRSKKQKVVARSSAEAEYRGMAHGVCEMLWLRHLM 922

Query: 293  TEVGFRPKRATQVFCDNKAAIQISENPVQHDRTKHVEIDRHFIKEKLEAGIIELPFVRTE 114
             ++GF+PK A  ++CDNKAAI I+ NPVQHDRTKHVE+DRHFIKEKLE+  I +P VRTE
Sbjct: 923  KDLGFKPKYAMNLYCDNKAAIDIAHNPVQHDRTKHVEVDRHFIKEKLESETINMPHVRTE 982

Query: 113  DQLADILTKAVGTRIMQDCLGKLNFGD 33
            DQLADILTKAV  ++    L KL   D
Sbjct: 983  DQLADILTKAVSGKVFHSSLDKLGMRD 1009


>gb|PRQ52323.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1014

 Score =  684 bits (1765), Expect = 0.0
 Identities = 330/507 (65%), Positives = 398/507 (78%)
 Frame = -3

Query: 1553 IPSNTEEALKSENWKKAMDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYKPDGTID 1374
            IP+  ++AL +  W KAM++EMEAL+KN TWE    P  K+ VGCRWI+T+KY  DGT+D
Sbjct: 503  IPNKVQDALANPKWTKAMEDEMEALQKNHTWELVPKPAGKRAVGCRWIYTLKYAADGTLD 562

Query: 1373 RYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNAFLHGDL 1194
            RYKARLVAKGYTQTYGIDY ETF+PVAK++T+RVL S+AAN  WPL QFDVKNAFLHGDL
Sbjct: 563  RYKARLVAKGYTQTYGIDYQETFAPVAKMNTVRVLLSLAANLDWPLKQFDVKNAFLHGDL 622

Query: 1193 KEEVYMEAPPGFSGGFKTREVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFKQSNSDHTL 1014
            KEEVYM+ PPG+S   +   VC+LKKSLYGLKQSPRAWFGRF+ +MK++G+KQSNSDHTL
Sbjct: 623  KEEVYMDLPPGYSLPSQAGMVCKLKKSLYGLKQSPRAWFGRFSQSMKQFGYKQSNSDHTL 682

Query: 1013 FLKRRQEYVTCLIIYVDDIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFLGIEVLRSQ 834
            FLK R++ +T LIIYVDD+I+TGND +E+KKL+  L + FEMKDLG LKYFLGIEV RS+
Sbjct: 683  FLKHRKDKLTALIIYVDDMIVTGNDPEEVKKLEAHLSSVFEMKDLGGLKYFLGIEVARSK 742

Query: 833  HGIFICQKKYILDLLTETGMLDCKPAETPMIANQKLYMEPEAELADKVRYQRMVGKLIYL 654
             GI + Q+KY++DLL ETG+L C+PA+TPM  N KL   P+    +K RYQR+VGKLIYL
Sbjct: 743  EGIALSQRKYVVDLLIETGLLACRPADTPMEQNHKLAEYPDQVPTNKERYQRLVGKLIYL 802

Query: 653  SHTRPDIAYAVGVVSQFMHQPQKAHMDAVERIIEYLKGTPGYGVLFESNGHLDIQVYTDA 474
            SHTRPDIAYAV VVSQFMH P + HM+AV RI+ YLK  PG G++F  N H DI  YTDA
Sbjct: 803  SHTRPDIAYAVSVVSQFMHAPSEDHMEAVHRILRYLKTNPGKGIMFSKNNHTDIAGYTDA 862

Query: 473  DWAGDKGKRRSTSGYFSLVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAEVLWIRKLL 294
            DWAG    RRSTSGYF+ VGGNLVTW           SAEAEYRG++ G+ E+LW+R L+
Sbjct: 863  DWAGSITDRRSTSGYFTFVGGNLVTWRSKKQKVVARSSAEAEYRGMAHGVCEMLWLRHLM 922

Query: 293  TEVGFRPKRATQVFCDNKAAIQISENPVQHDRTKHVEIDRHFIKEKLEAGIIELPFVRTE 114
             ++GF+PK A  ++CDNKAAI I+ NPVQHDRTKHVE+DRHFIKEKLE+  I +P VRTE
Sbjct: 923  KDLGFKPKYAMNLYCDNKAAIDIAHNPVQHDRTKHVEVDRHFIKEKLESETINMPHVRTE 982

Query: 113  DQLADILTKAVGTRIMQDCLGKLNFGD 33
            DQLADILTKAV  ++    L KL   D
Sbjct: 983  DQLADILTKAVSGKVFHSSLDKLGMRD 1009


>gb|PNX86057.1| beta-galactosidase [Trifolium pratense]
          Length = 494

 Score =  663 bits (1711), Expect = 0.0
 Identities = 316/490 (64%), Positives = 388/490 (79%)
 Frame = -3

Query: 1502 MDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYKPDGTIDRYKARLVAKGYTQTYGI 1323
            M EEM AL KN TW+   LP  KK VGC+W++TIK+K DGTI+RYKARLVAKGYTQ+YG+
Sbjct: 1    MVEEMSALEKNSTWDLVTLPKGKKTVGCKWVYTIKHKADGTIERYKARLVAKGYTQSYGV 60

Query: 1322 DYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNAFLHGDLKEEVYMEAPPGFSGGFK 1143
            DY ETF+PVAK++T+R+L S+AANQ WPL QFDVKNAFLHG++ EE+YM+ PPG     +
Sbjct: 61   DYQETFAPVAKLNTVRILLSLAANQDWPLLQFDVKNAFLHGEILEEIYMDLPPGMIDSNE 120

Query: 1142 TREVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFKQSNSDHTLFLKRRQEYVTCLIIYVD 963
             + VC+L+K+LYGLKQSPRAWFGRFT +MK +G+K SNSDHTLFLK+ +  VT LIIYVD
Sbjct: 121  MK-VCKLRKALYGLKQSPRAWFGRFTKSMKAFGYKASNSDHTLFLKKGEGKVTALIIYVD 179

Query: 962  DIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFLGIEVLRSQHGIFICQKKYILDLLTE 783
            D+I+TGND+ EI  L++ L +EFEMK LG LKYFLGIEV RS+HGIF+CQ+KY LDLL+E
Sbjct: 180  DMIVTGNDQDEISSLQKYLASEFEMKQLGNLKYFLGIEVARSKHGIFLCQRKYTLDLLSE 239

Query: 782  TGMLDCKPAETPMIANQKLYMEPEAELADKVRYQRMVGKLIYLSHTRPDIAYAVGVVSQF 603
            TG+L CKP +TP+  N  L+    +   DK RYQR+VGKLIYLSHTRPDI YAV VVSQF
Sbjct: 240  TGLLGCKPVDTPIEQNHMLFQCQNSASIDKGRYQRLVGKLIYLSHTRPDITYAVNVVSQF 299

Query: 602  MHQPQKAHMDAVERIIEYLKGTPGYGVLFESNGHLDIQVYTDADWAGDKGKRRSTSGYFS 423
            MH P+KAHMDAVERI+ YLK TPG G+LF ++G+L ++ YTDADWAG K  RRSTSGYF+
Sbjct: 300  MHDPRKAHMDAVERILRYLKSTPGKGILFSNHGNLKVEGYTDADWAGSKNDRRSTSGYFT 359

Query: 422  LVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAEVLWIRKLLTEVGFRPKRATQVFCDN 243
             VGGNLVTW           SAEAE+RG++ G+ E+LWI+ +L+++GF P     ++CDN
Sbjct: 360  FVGGNLVTWRSKKQPVVARSSAEAEFRGMALGVCELLWIQNVLSDLGFEPNETMTLYCDN 419

Query: 242  KAAIQISENPVQHDRTKHVEIDRHFIKEKLEAGIIELPFVRTEDQLADILTKAVGTRIMQ 63
             +AI I+ NPVQHDRTKHVEIDRHFIKEKLEAGII  PFVR+E QLAD+LTK V +R+  
Sbjct: 420  TSAIAIAHNPVQHDRTKHVEIDRHFIKEKLEAGIISFPFVRSELQLADVLTKGVSSRVFN 479

Query: 62   DCLGKLNFGD 33
            + L KL   D
Sbjct: 480  ESLFKLGMCD 489


>gb|PNY13478.1| beta-galactosidase [Trifolium pratense]
          Length = 498

 Score =  661 bits (1706), Expect = 0.0
 Identities = 313/493 (63%), Positives = 390/493 (79%), Gaps = 3/493 (0%)
 Frame = -3

Query: 1502 MDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYKPDGTIDRYKARLVAKGYTQTYGI 1323
            M EEM AL KN TW+   LP+ KK VGCRW+FTIK+K DG+++RYKARLVAKGYTQ+YG+
Sbjct: 1    MVEEMAALEKNNTWDVVTLPSGKKTVGCRWVFTIKHKADGSVERYKARLVAKGYTQSYGV 60

Query: 1322 DYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNAFLHGDLKEEVYMEAPPGFSGGF- 1146
            DY ETF+PVAK++T+R+L S+AANQ WPL QFDVKNAFLHG++ EE+YM++PPG +    
Sbjct: 61   DYQETFAPVAKLNTVRILLSLAANQDWPLLQFDVKNAFLHGEILEEIYMDSPPGMTDSMI 120

Query: 1145 --KTREVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFKQSNSDHTLFLKRRQEYVTCLII 972
                 +VC+LKK+LYGLKQSPRAWFGRFT +MK +G++ SN DHTLFLK+ +  +T LII
Sbjct: 121  DSNGMKVCKLKKALYGLKQSPRAWFGRFTKSMKAFGYRASNYDHTLFLKKGEGKITALII 180

Query: 971  YVDDIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFLGIEVLRSQHGIFICQKKYILDL 792
            YVDD+I+TGND+ EI  L+  L +EFEMK LG LKYFLGIEV RS+HGIF+CQ+KY +DL
Sbjct: 181  YVDDMIVTGNDQDEISSLQRYLASEFEMKQLGNLKYFLGIEVARSKHGIFLCQRKYTIDL 240

Query: 791  LTETGMLDCKPAETPMIANQKLYMEPEAELADKVRYQRMVGKLIYLSHTRPDIAYAVGVV 612
            L+ETG+L CKP +TP+  N  L+    +   D+ RYQR+VGKLIYLSHTRPDI YAV VV
Sbjct: 241  LSETGLLGCKPVDTPIEQNHMLFQCSNSASIDRGRYQRLVGKLIYLSHTRPDITYAVNVV 300

Query: 611  SQFMHQPQKAHMDAVERIIEYLKGTPGYGVLFESNGHLDIQVYTDADWAGDKGKRRSTSG 432
            SQFMH P+K HMDAVERI+ YLK TPG G+LF ++G+L ++ YTDADWAG K  RRSTSG
Sbjct: 301  SQFMHDPRKPHMDAVERILRYLKSTPGKGILFSNHGNLKVEGYTDADWAGSKNDRRSTSG 360

Query: 431  YFSLVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAEVLWIRKLLTEVGFRPKRATQVF 252
            YF+ VGGNLVTW           SAEAE+RG++ G+ E+LWIR +L+++GF+P  A +++
Sbjct: 361  YFTFVGGNLVTWRSKKQPVVARSSAEAEFRGMALGVCELLWIRNVLSDLGFKPNEAMRLY 420

Query: 251  CDNKAAIQISENPVQHDRTKHVEIDRHFIKEKLEAGIIELPFVRTEDQLADILTKAVGTR 72
            CDN +AI I+ NPVQHDRTKHVEIDRHFIKEKLEAGII  PFVR+E QLAD+LTK V +R
Sbjct: 421  CDNTSAIAIAHNPVQHDRTKHVEIDRHFIKEKLEAGIISFPFVRSELQLADVLTKGVTSR 480

Query: 71   IMQDCLGKLNFGD 33
            +  + L KL   D
Sbjct: 481  VFNESLFKLGMCD 493


>gb|PKA59461.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Apostasia shenzhenica]
          Length = 951

 Score =  677 bits (1746), Expect = 0.0
 Identities = 326/513 (63%), Positives = 401/513 (78%), Gaps = 1/513 (0%)
 Frame = -3

Query: 1568 LYSEKIPSNTEEALKSENWKKAMDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYKP 1389
            L +  IPSN ++AL    W+KAM+EEMEAL+KN TWE  +LP   KP+GCRW+FT+K K 
Sbjct: 434  LSTVSIPSNVQDALADPKWRKAMNEEMEALQKNATWELVLLPKGMKPIGCRWVFTVKLKS 493

Query: 1388 DGTIDRYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNAF 1209
            DG+IDRYKARLVAKGYTQ YG+DY +TF+PVAKI+TIR+L SIAAN+ WPL QFDVKNAF
Sbjct: 494  DGSIDRYKARLVAKGYTQRYGVDYQDTFAPVAKINTIRILISIAANRDWPLQQFDVKNAF 553

Query: 1208 LHGDLKEEVYMEAPPGFSGGFKTR-EVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFKQS 1032
            L+GDL+EEVYME PPG   G   + EVC+LKKSLYGLKQSPRAWFGRF+  MK++G+KQS
Sbjct: 554  LNGDLEEEVYMELPPGVKNGSSCKGEVCKLKKSLYGLKQSPRAWFGRFSTTMKEFGYKQS 613

Query: 1031 NSDHTLFLKRRQEYVTCLIIYVDDIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFLGI 852
            NSDHTLF+K ++  VT LI+YVD I++TG+D  E+K L+E L T+FEMK+LG+LKYFLGI
Sbjct: 614  NSDHTLFIKHKKGKVTALIVYVDGIVLTGDDPCEMKALQEYLATKFEMKNLGQLKYFLGI 673

Query: 851  EVLRSQHGIFICQKKYILDLLTETGMLDCKPAETPMIANQKLYMEPEAELADKVRYQRMV 672
            EV RS+HGI + Q+KY+LDLLTETGML CKP ETPM  N KL + P+   ADK RYQR+V
Sbjct: 674  EVARSKHGILLSQRKYVLDLLTETGMLGCKPVETPMEMNHKLGILPDQAPADKGRYQRLV 733

Query: 671  GKLIYLSHTRPDIAYAVGVVSQFMHQPQKAHMDAVERIIEYLKGTPGYGVLFESNGHLDI 492
            G+LIYLSHTRPDIAYAV VVSQFMH P + HM+AV RI+ YLKG PG G+LF  NG  +I
Sbjct: 734  GRLIYLSHTRPDIAYAVSVVSQFMHAPSEEHMEAVYRILRYLKGAPGKGLLFSKNGISNI 793

Query: 491  QVYTDADWAGDKGKRRSTSGYFSLVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAEVL 312
            + YTD+DWAGD+  RRSTSGYF+ V GNLVTW           SAEAE+RG++ G+ E+L
Sbjct: 794  EGYTDSDWAGDQTTRRSTSGYFTFVEGNLVTWRSKKQKVVARSSAEAEFRGMAHGVCELL 853

Query: 311  WIRKLLTEVGFRPKRATQVFCDNKAAIQISENPVQHDRTKHVEIDRHFIKEKLEAGIIEL 132
            WIR +L ++G        + CDNKA I+I++NPVQHDRTKHVE+DRHFIKE L+  II+ 
Sbjct: 854  WIRNILRDLGIEYATPMNLHCDNKATIEIAQNPVQHDRTKHVEVDRHFIKENLDEKIIQF 913

Query: 131  PFVRTEDQLADILTKAVGTRIMQDCLGKLNFGD 33
            PF+++E QLADILTKAV  ++    + KL   D
Sbjct: 914  PFIQSESQLADILTKAVSGKVFHGIIDKLGMID 946


>gb|PNY13477.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1100

 Score =  681 bits (1758), Expect = 0.0
 Identities = 324/515 (62%), Positives = 403/515 (78%), Gaps = 3/515 (0%)
 Frame = -3

Query: 1568 LYSEKIPSNTEEALKSENWKKAMDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYKP 1389
            L S  IPSN +EAL    W +AM EEM AL KN TW+   LP+ KK VGCRW+FTIK+K 
Sbjct: 581  LSSISIPSNVQEALADPRWTEAMVEEMAALEKNNTWDVVTLPSGKKTVGCRWVFTIKHKA 640

Query: 1388 DGTIDRYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNAF 1209
            DG+++RYKARLVAKGYTQ+YG+DY ETF+PVAK++T+R+L S+AANQ WPL QFDVKNAF
Sbjct: 641  DGSVERYKARLVAKGYTQSYGVDYQETFAPVAKLNTVRILLSLAANQDWPLLQFDVKNAF 700

Query: 1208 LHGDLKEEVYMEAPPGFSGGF---KTREVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFK 1038
            LHG++ EE+YM++PPG +         +VC+LKK+LYGLKQSPRAWFGRFT +MK +G++
Sbjct: 701  LHGEILEEIYMDSPPGMTDSMIDSNGMKVCKLKKALYGLKQSPRAWFGRFTKSMKAFGYR 760

Query: 1037 QSNSDHTLFLKRRQEYVTCLIIYVDDIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFL 858
             SN DHTLFLK+ +  +T LIIYVDD+I+TGND+ EI  L+  L +EFEMK LG LKYFL
Sbjct: 761  ASNYDHTLFLKKGEGKITALIIYVDDMIVTGNDQDEISSLQRYLASEFEMKQLGNLKYFL 820

Query: 857  GIEVLRSQHGIFICQKKYILDLLTETGMLDCKPAETPMIANQKLYMEPEAELADKVRYQR 678
            GIEV RS+HGIF+CQ+KY +DLL+ETG+L CKP +TP+  N  L+    +   D+ RYQR
Sbjct: 821  GIEVARSKHGIFLCQRKYTIDLLSETGLLGCKPVDTPIEQNHMLFQCSNSASIDRGRYQR 880

Query: 677  MVGKLIYLSHTRPDIAYAVGVVSQFMHQPQKAHMDAVERIIEYLKGTPGYGVLFESNGHL 498
            +VGKLIYLSHTRPDI YAV VVSQFMH P+K HMDAVERI+ YLK TPG G+LF ++G+L
Sbjct: 881  LVGKLIYLSHTRPDITYAVNVVSQFMHDPRKPHMDAVERILRYLKSTPGKGILFSNHGNL 940

Query: 497  DIQVYTDADWAGDKGKRRSTSGYFSLVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAE 318
             ++ YTDADWAG K  RRSTSGYF+ VGGNLVTW           SAEAE+RG++ G+ E
Sbjct: 941  KVEGYTDADWAGSKNDRRSTSGYFTFVGGNLVTWRSKKQPVVARSSAEAEFRGMALGVCE 1000

Query: 317  VLWIRKLLTEVGFRPKRATQVFCDNKAAIQISENPVQHDRTKHVEIDRHFIKEKLEAGII 138
            +LWIR +L+++GF+P  A +++CDN +AI I+ NPVQHDRTKHVEIDRHFIKEKLEAGII
Sbjct: 1001 LLWIRNVLSDLGFKPNEAMRLYCDNTSAIAIAHNPVQHDRTKHVEIDRHFIKEKLEAGII 1060

Query: 137  ELPFVRTEDQLADILTKAVGTRIMQDCLGKLNFGD 33
              PFVR+E QLAD+LTK V +R+  + L KL   D
Sbjct: 1061 SFPFVRSELQLADVLTKGVTSRVFNESLFKLGMCD 1095


>gb|PRQ53465.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1350

 Score =  684 bits (1766), Expect = 0.0
 Identities = 330/507 (65%), Positives = 398/507 (78%)
 Frame = -3

Query: 1553 IPSNTEEALKSENWKKAMDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYKPDGTID 1374
            IP+  ++AL +  W KAM++EMEAL+KN TWE    P  K+ VGCRWI+T+KY  DGT+D
Sbjct: 839  IPNKVQDALSNPKWTKAMEDEMEALQKNHTWELVPKPAGKRAVGCRWIYTLKYAADGTLD 898

Query: 1373 RYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNAFLHGDL 1194
            RYKARLVAKGYTQTYGIDY ETF+PVAK++T+RVL S+AAN  WPL QFDVKNAFLHGDL
Sbjct: 899  RYKARLVAKGYTQTYGIDYQETFAPVAKMNTVRVLLSLAANLDWPLKQFDVKNAFLHGDL 958

Query: 1193 KEEVYMEAPPGFSGGFKTREVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFKQSNSDHTL 1014
            KEEVYM+ PPG+S   +   VC+LKKSLYGLKQSPRAWFGRF+ +MK++G+KQSNSDHTL
Sbjct: 959  KEEVYMDLPPGYSLPSQAGMVCKLKKSLYGLKQSPRAWFGRFSQSMKQFGYKQSNSDHTL 1018

Query: 1013 FLKRRQEYVTCLIIYVDDIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFLGIEVLRSQ 834
            FLK R++ +T LIIYVDD+I+TGND +E+KKL+  L + FEMKDLG LKYFLGIEV RS+
Sbjct: 1019 FLKHRKDKLTALIIYVDDMIVTGNDPEEVKKLEAHLSSVFEMKDLGGLKYFLGIEVARSK 1078

Query: 833  HGIFICQKKYILDLLTETGMLDCKPAETPMIANQKLYMEPEAELADKVRYQRMVGKLIYL 654
             GI + Q+KY++DLL ETG+L C+PA+TPM  N KL   P+    +K RYQR+VGKLIYL
Sbjct: 1079 EGIALSQRKYVVDLLIETGLLACRPADTPMEQNHKLAEYPDQVPTNKERYQRLVGKLIYL 1138

Query: 653  SHTRPDIAYAVGVVSQFMHQPQKAHMDAVERIIEYLKGTPGYGVLFESNGHLDIQVYTDA 474
            SHTRPDIAYAV VVSQFMH P + HM+AV RI+ YLK  PG G++F  N H DI  YTDA
Sbjct: 1139 SHTRPDIAYAVSVVSQFMHAPSEDHMEAVHRILRYLKTNPGKGIMFSKNNHTDIAGYTDA 1198

Query: 473  DWAGDKGKRRSTSGYFSLVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAEVLWIRKLL 294
            DWAG    RRSTSGYF+ VGGNLVTW           SAEAEYRG++ G+ E+LW+R L+
Sbjct: 1199 DWAGSITDRRSTSGYFTFVGGNLVTWRSKKQKVVARSSAEAEYRGMAHGVCEMLWLRHLM 1258

Query: 293  TEVGFRPKRATQVFCDNKAAIQISENPVQHDRTKHVEIDRHFIKEKLEAGIIELPFVRTE 114
             ++GF+PK A  ++CDNKAAI I+ NPVQHDRTKHVE+DRHFIKEKLE+  I +P VRTE
Sbjct: 1259 KDLGFKPKYAMNLYCDNKAAIDIAHNPVQHDRTKHVEVDRHFIKEKLESETINMPHVRTE 1318

Query: 113  DQLADILTKAVGTRIMQDCLGKLNFGD 33
            DQLADILTKAV  ++    L KL   D
Sbjct: 1319 DQLADILTKAVSGKVFHSSLDKLGMRD 1345


>gb|PRQ43270.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 684

 Score =  659 bits (1700), Expect = 0.0
 Identities = 319/508 (62%), Positives = 392/508 (77%), Gaps = 1/508 (0%)
 Frame = -3

Query: 1553 IPSNTEEALKSENWKKAMDEEMEALRKNGTWEKCVLPNEKKPVGCRWIFTIKYKPDGTID 1374
            +P+  ++AL    W+KAM+EEMEAL+K+ TW+    P  KK VGCRW+FT+K+  DG+++
Sbjct: 172  VPNKVQDALGDPKWRKAMEEEMEALQKSNTWQLVPPPQGKKAVGCRWVFTVKHNADGSVN 231

Query: 1373 RYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANQGWPLHQFDVKNAFLHGDL 1194
            RYKARLVAKG+TQTYGIDY ETF+PVAK++TIRVL S AAN  WPL QFDVKNAFLHG+L
Sbjct: 232  RYKARLVAKGFTQTYGIDYDETFAPVAKMNTIRVLLSFAANLNWPLRQFDVKNAFLHGEL 291

Query: 1193 KEEVYMEAPPGFSGGFKTREVCRLKKSLYGLKQSPRAWFGRFTIAMKKYGFKQSNSDHTL 1014
             EEVYM  PPG+        VC+L+KSLYGLKQSPRAWFGRF+  M+K G+KQSNSDHTL
Sbjct: 292  TEEVYMSLPPGYVAASPGDFVCKLRKSLYGLKQSPRAWFGRFSQFMRKVGYKQSNSDHTL 351

Query: 1013 FLKRRQEYVTCLIIYVDDIIITGNDEQEIKKLKEGLFTEFEMKDLGRLKYFLGIEVLRSQ 834
            FLK +Q  VT LIIYVDD++ITGND  E+ +L+  L +EFEMKDLG LKYFLGIEV R +
Sbjct: 352  FLKHQQGKVTALIIYVDDMVITGNDTVEMDRLQRQLASEFEMKDLGELKYFLGIEVARGR 411

Query: 833  HGIFICQKKYILDLLTETGMLDCKPAETPMIANQKLYMEPEAELADKVRYQRMVGKLIYL 654
             GI++CQ+KY+LDLLTETG+LDC+P +TP+  N  L   P+    D+  YQR+VG+LIYL
Sbjct: 412  EGIYLCQRKYVLDLLTETGLLDCRPIDTPIEQNHCLAEYPDQVPTDRACYQRLVGRLIYL 471

Query: 653  SHTRPDIAYAVGVVSQFMHQPQKAHMDAVERIIEYLKGTPGYGVLF-ESNGHLDIQVYTD 477
            +HTRPDIAYAV VVSQFMH P ++HMDAV RI++YLK  PG GVLF + N  L++  +TD
Sbjct: 472  AHTRPDIAYAVSVVSQFMHNPSESHMDAVMRILKYLKSAPGRGVLFSKHNNILEVCGFTD 531

Query: 476  ADWAGDKGKRRSTSGYFSLVGGNLVTWXXXXXXXXXXXSAEAEYRGISRGLAEVLWIRKL 297
            ADWAG+   RRSTSGYF+ VGGNLVTW           SAEAEYRG++ G+ E+LW+R L
Sbjct: 532  ADWAGNITDRRSTSGYFTFVGGNLVTWKSKKQKVVARSSAEAEYRGMAHGVCELLWLRNL 591

Query: 296  LTEVGFRPKRATQVFCDNKAAIQISENPVQHDRTKHVEIDRHFIKEKLEAGIIELPFVRT 117
            L ++GF+ +   Q++CDNKAAI IS+NPVQHDRTKHVE+DRHFIKEKL+A II  PFV T
Sbjct: 592  LRDLGFKLESTMQLYCDNKAAIDISQNPVQHDRTKHVEVDRHFIKEKLDAKIISFPFVPT 651

Query: 116  EDQLADILTKAVGTRIMQDCLGKLNFGD 33
            E+QLADILTK V  +   D L KL   D
Sbjct: 652  EEQLADILTKGVSRKAFYDSLSKLGMVD 679