BLASTX nr result

ID: Chrysanthemum22_contig00012597 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00012597
         (488 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH90198.1| hypothetical protein Ccrd_007785 [Cynara carduncu...    63   2e-08
ref|XP_023738952.1| flowering time control protein FCA-like isof...    60   2e-07
ref|XP_023738951.1| flowering time control protein FCA-like isof...    60   2e-07
ref|XP_023738950.1| flowering time control protein FCA-like isof...    60   2e-07
gb|PLY69820.1| hypothetical protein LSAT_6X261 [Lactuca sativa]        60   2e-07

>gb|KVH90198.1| hypothetical protein Ccrd_007785 [Cynara cardunculus var. scolymus]
          Length = 844

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 39/81 (48%), Positives = 40/81 (49%), Gaps = 14/81 (17%)
 Frame = -1

Query: 203 FSGNRRPFDGNSSPXXXXXXXXXRXXXXXXXXXXXXXS--------------EFEVPLSG 66
           FSGNRRPFD NS P                                      EFEVPLSG
Sbjct: 48  FSGNRRPFD-NSPPRYPLSGGGGGGGFRPMEGEGGFRPLGVRGARAYNNPSSEFEVPLSG 106

Query: 65  QKRFGSDYEVPVSGQKRQFPF 3
           QKRF SDYEVP+SGQKRQFPF
Sbjct: 107 QKRFNSDYEVPMSGQKRQFPF 127


>ref|XP_023738952.1| flowering time control protein FCA-like isoform X3 [Lactuca sativa]
          Length = 732

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/83 (45%), Positives = 39/83 (46%), Gaps = 16/83 (19%)
 Frame = -1

Query: 203 FSGNRRPFDGNSSPXXXXXXXXXRXXXXXXXXXXXXXS----------------EFEVPL 72
           FSGNRRPFD NS P                                        EFEVPL
Sbjct: 52  FSGNRRPFD-NSPPRYSLSGGGGGGGGGFHPMDGDGGFRPLGVRGARSYNNPSSEFEVPL 110

Query: 71  SGQKRFGSDYEVPVSGQKRQFPF 3
           SGQKRF  DYEVP+SGQKRQFPF
Sbjct: 111 SGQKRFNPDYEVPMSGQKRQFPF 133


>ref|XP_023738951.1| flowering time control protein FCA-like isoform X2 [Lactuca sativa]
          Length = 738

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/83 (45%), Positives = 39/83 (46%), Gaps = 16/83 (19%)
 Frame = -1

Query: 203 FSGNRRPFDGNSSPXXXXXXXXXRXXXXXXXXXXXXXS----------------EFEVPL 72
           FSGNRRPFD NS P                                        EFEVPL
Sbjct: 52  FSGNRRPFD-NSPPRYSLSGGGGGGGGGFHPMDGDGGFRPLGVRGARSYNNPSSEFEVPL 110

Query: 71  SGQKRFGSDYEVPVSGQKRQFPF 3
           SGQKRF  DYEVP+SGQKRQFPF
Sbjct: 111 SGQKRFNPDYEVPMSGQKRQFPF 133


>ref|XP_023738950.1| flowering time control protein FCA-like isoform X1 [Lactuca sativa]
          Length = 740

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/83 (45%), Positives = 39/83 (46%), Gaps = 16/83 (19%)
 Frame = -1

Query: 203 FSGNRRPFDGNSSPXXXXXXXXXRXXXXXXXXXXXXXS----------------EFEVPL 72
           FSGNRRPFD NS P                                        EFEVPL
Sbjct: 52  FSGNRRPFD-NSPPRYSLSGGGGGGGGGFHPMDGDGGFRPLGVRGARSYNNPSSEFEVPL 110

Query: 71  SGQKRFGSDYEVPVSGQKRQFPF 3
           SGQKRF  DYEVP+SGQKRQFPF
Sbjct: 111 SGQKRFNPDYEVPMSGQKRQFPF 133


>gb|PLY69820.1| hypothetical protein LSAT_6X261 [Lactuca sativa]
          Length = 757

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/83 (45%), Positives = 39/83 (46%), Gaps = 16/83 (19%)
 Frame = -1

Query: 203 FSGNRRPFDGNSSPXXXXXXXXXRXXXXXXXXXXXXXS----------------EFEVPL 72
           FSGNRRPFD NS P                                        EFEVPL
Sbjct: 52  FSGNRRPFD-NSPPRYSLSGGGGGGGGGFHPMDGDGGFRPLGVRGARSYNNPSSEFEVPL 110

Query: 71  SGQKRFGSDYEVPVSGQKRQFPF 3
           SGQKRF  DYEVP+SGQKRQFPF
Sbjct: 111 SGQKRFNPDYEVPMSGQKRQFPF 133


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