BLASTX nr result

ID: Chrysanthemum22_contig00012475 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00012475
         (494 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI02389.1| hypothetical protein Ccrd_019346 [Cynara carduncu...    68   3e-10
ref|XP_023749699.1| WPP domain-interacting protein 2-like [Lactu...    62   4e-08

>gb|KVI02389.1| hypothetical protein Ccrd_019346 [Cynara cardunculus var. scolymus]
          Length = 378

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 59/158 (37%), Positives = 69/158 (43%), Gaps = 45/158 (28%)
 Frame = +1

Query: 154 SSSPSVGKRSGLKKWRRIPRGLAVKK----ETRQNG------------------------ 249
           SS   V K   LKKWRR PR L  K     + R+NG                        
Sbjct: 11  SSKEDVIKLQELKKWRRKPRELVKKTGSNLDGRKNGDFSESDDSIPSINTMVNVNGNSPV 70

Query: 250 --------GLVLSPSVGHGEGSENSEDQGSRSSSDA---RLKYEIGSVNGDGGD------ 378
                   GL   P     E SENSED  SRSS+ A   R K+EI S+NG          
Sbjct: 71  SNVLYDDSGLGGLPDSDTKEDSENSEDHSSRSSTAASAPRKKHEIISLNGRNSGISSVPG 130

Query: 379 DQPRNERVGPGKKARGFGMESSANTAKVGSDSGSTGFV 492
           DQ RN  +G  KKARGF ME   + + +GSDS S+ FV
Sbjct: 131 DQQRNGLIGTSKKARGFKMEMENSYSSMGSDSRSSNFV 168


>ref|XP_023749699.1| WPP domain-interacting protein 2-like [Lactuca sativa]
 gb|PLY61680.1| hypothetical protein LSAT_9X88621 [Lactuca sativa]
          Length = 410

 Score = 62.0 bits (149), Expect = 4e-08
 Identities = 58/167 (34%), Positives = 76/167 (45%), Gaps = 36/167 (21%)
 Frame = +1

Query: 76  NDNDDENKLKSSNGVVVIIGGTEGMG-SSSPSVGKRSGLKKWRRIPRGL----AVKKETR 240
           N  + E KLKS NGV  +    +    SSS SV KR GL+KWRR+PR L      K ++R
Sbjct: 14  NVGESEIKLKS-NGVCHVEDVNDSSNRSSSTSVNKR-GLRKWRRMPRELVKTPGSKIDSR 71

Query: 241 QNGGLVLS------------PSVGHGEG-------------SENSEDQGSRSSSDARLKY 345
            NG L  S              + HG+              SENSEDQ  RSS   R + 
Sbjct: 72  NNGDLGDSLVRDSMVNVNGNSKLHHGDSGLGDHSVLATRADSENSEDQSIRSSYAPRTRP 131

Query: 346 EIGSVNGDG------GDDQPRNERVGPGKKARGFGMESSANTAKVGS 468
           +I + NG          DQ  N + G  KK RGF +E   + + +G+
Sbjct: 132 KISNSNGGNSAISVHSGDQKSNHQTGSIKKLRGFNIEKENSDSNMGN 178


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