BLASTX nr result

ID: Chrysanthemum22_contig00012352 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00012352
         (442 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY68991.1| hypothetical protein LSAT_9X89380 [Lactuca sativa]      44   4e-08
ref|XP_023740111.1| enhancer of mRNA-decapping protein 4-like [L...    44   4e-08
gb|KVI02357.1| WD40 repeat-containing protein [Cynara cardunculu...    57   2e-06

>gb|PLY68991.1| hypothetical protein LSAT_9X89380 [Lactuca sativa]
          Length = 1326

 Score = 43.9 bits (102), Expect(2) = 4e-08
 Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
 Frame = -2

Query: 393 LDMSQCLPPPFD----TVAYERQDSTLSRE--PPSTE---GMELPISNAEISYLALIPAL 241
           LDMSQCLPPP D    +VAYER DST+SR+   P+ E   G+E   S  +      +   
Sbjct: 575 LDMSQCLPPPVDSVAASVAYERSDSTVSRDAIAPNAEVLTGLEASASGNKTEIPLPVSVS 634

Query: 240 SRDNPQVL 217
           + D   +L
Sbjct: 635 NSDGSSIL 642



 Score = 41.2 bits (95), Expect(2) = 4e-08
 Identities = 21/55 (38%), Positives = 33/55 (60%)
 Frame = -3

Query: 167 ITSKHSDLQSPISVPESSEPKIVPVDRQVETADLVTDSNKVLKEDGTMFKHPTHL 3
           ++ K SDL+SP+S+ +  EPK++        +++  DS     +DG  FKHPTHL
Sbjct: 668 LSRKLSDLKSPVSIHD--EPKVIEYSVDAAHSNISNDSIIDESKDGGKFKHPTHL 720


>ref|XP_023740111.1| enhancer of mRNA-decapping protein 4-like [Lactuca sativa]
          Length = 1324

 Score = 43.9 bits (102), Expect(2) = 4e-08
 Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
 Frame = -2

Query: 393 LDMSQCLPPPFD----TVAYERQDSTLSRE--PPSTE---GMELPISNAEISYLALIPAL 241
           LDMSQCLPPP D    +VAYER DST+SR+   P+ E   G+E   S  +      +   
Sbjct: 575 LDMSQCLPPPVDSVAASVAYERSDSTVSRDAIAPNAEVLTGLEASASGNKTEIPLPVSVS 634

Query: 240 SRDNPQVL 217
           + D   +L
Sbjct: 635 NSDGSSIL 642



 Score = 41.2 bits (95), Expect(2) = 4e-08
 Identities = 21/55 (38%), Positives = 33/55 (60%)
 Frame = -3

Query: 167 ITSKHSDLQSPISVPESSEPKIVPVDRQVETADLVTDSNKVLKEDGTMFKHPTHL 3
           ++ K SDL+SP+S+ +  EPK++        +++  DS     +DG  FKHPTHL
Sbjct: 668 LSRKLSDLKSPVSIHD--EPKVIEYSVDAAHSNISNDSIIDESKDGGKFKHPTHL 720


>gb|KVI02357.1| WD40 repeat-containing protein [Cynara cardunculus var. scolymus]
          Length = 1468

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = -2

Query: 393 LDMSQCLPPPFDTVAYERQDSTLSREPPSTEGMELPISNAEISYLALIPA 244
           LD+SQCLPPP D+V YE+ D+T+ R+ PSTEG E   S  E+  +  +P+
Sbjct: 668 LDLSQCLPPPIDSVTYEKFDTTVLRDAPSTEGFEPSGSKTEMPLVVSVPS 717


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