BLASTX nr result

ID: Chrysanthemum22_contig00012170 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00012170
         (2163 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023736289.1| uncharacterized protein LOC111884204 [Lactuc...    64   1e-07
ref|XP_021987708.1| uncharacterized protein LOC110884308 [Helian...    62   4e-07
gb|KVI01117.1| hypothetical protein Ccrd_020619 [Cynara carduncu...    62   5e-07
ref|YP_009355855.1| ribosomal protein S14 (mitochondrion) [Diplo...    55   3e-06

>ref|XP_023736289.1| uncharacterized protein LOC111884204 [Lactuca sativa]
 gb|PLY71900.1| hypothetical protein LSAT_0X23500 [Lactuca sativa]
          Length = 205

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 29/40 (72%), Positives = 34/40 (85%)
 Frame = +1

Query: 829 QPIHLTHNCHQETSHSWSSLQRDLKSNGRVTCLFSDNRSK 948
           Q I+LT    QE+SHSW+SLQRDLKS+GR+ CLFSDNRSK
Sbjct: 28  QSINLTRRRRQESSHSWNSLQRDLKSDGRIYCLFSDNRSK 67


>ref|XP_021987708.1| uncharacterized protein LOC110884308 [Helianthus annuus]
 gb|OTG10217.1| hypothetical protein HannXRQ_Chr10g0285171 [Helianthus annuus]
          Length = 204

 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 34/59 (57%), Positives = 39/59 (66%)
 Frame = +1

Query: 772 ISISSPLTTSYKTIQSYRPQPIHLTHNCHQETSHSWSSLQRDLKSNGRVTCLFSDNRSK 948
           +SIS P  +    I S R     +  N  Q+ SHSWSSLQRDLKSNG+V CLFSDNRSK
Sbjct: 5   VSISHPNLSKTLAIGS-RVDAQSINFNRRQQISHSWSSLQRDLKSNGKVYCLFSDNRSK 62


>gb|KVI01117.1| hypothetical protein Ccrd_020619 [Cynara cardunculus var. scolymus]
          Length = 213

 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
 Frame = +1

Query: 772 ISISSPLTTSYKTI-QSYRP---QPIHLTHNCHQETSHSWSSLQRDLKSNGRVTCLFSDN 939
           +SI  P+++    I  S  P   Q I+LT    QETSHSW+SLQR+LKS+GR+ CLFSDN
Sbjct: 6   LSIGHPISSKSLPIGSSLAPSDVQSINLTRCRRQETSHSWNSLQRELKSDGRIYCLFSDN 65

Query: 940 RSK 948
           R+K
Sbjct: 66  RNK 68


>ref|YP_009355855.1| ribosomal protein S14 (mitochondrion) [Diplostephium hartwegii]
 gb|AOW70630.1| ribosomal protein S14 (mitochondrion) [Diplostephium hartwegii]
          Length = 57

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -2

Query: 506 MSEKQNI*DHKRRLLAAKYELRRKLYQLVK 417
           MSEKQNI DHKRRLLAAKYELRRKLY+ VK
Sbjct: 1   MSEKQNIRDHKRRLLAAKYELRRKLYKFVK 30


Top