BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00011977
         (527 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_068729.1| putative reverse transcriptase [Soybean chlorot...    73   1e-11
ref|NP_861410.1| putative multifunctional pol protein [Cestrum y...    61   1e-07

>ref|NP_068729.1| putative reverse transcriptase [Soybean chlorotic mottle virus]
 sp|P15629.2|POL_SOCMV RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase
 emb|CAC16945.1| putative reverse transcriptase [Soybean chlorotic mottle virus]
          Length = 692

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 4/71 (5%)
 Frame = -3

Query: 525 VSKLKMEPLHTRFELRTDSKYAA--C*LN--TERIKGRLINWQITLNQYELYIKYIKSED 358
           + K +++ L TRF LRTDSKY A  C  N  T+   GRLI WQ+ L  Y+ Y++ IKSE+
Sbjct: 616 LEKWRIDLLQTRFLLRTDSKYFAGFCRYNIKTDYRNGRLIRWQLRLQAYQPYVELIKSEN 675

Query: 357 NSFADTLTREW 325
           N FADTLTREW
Sbjct: 676 NPFADTLTREW 686


>ref|NP_861410.1| putative multifunctional pol protein [Cestrum yellow leaf curling
           virus]
 sp|Q7TD08.1|POL_CYLCV RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase
 gb|AAP78924.1| putative multifunctional pol protein [Cestrum yellow leaf curling
           virus]
          Length = 643

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/69 (49%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
 Frame = -3

Query: 519 KLKMEPLHTRFELRTDSKY----AAC*LNTERIKGRLINWQITLNQYELYIKYIKSEDNS 352
           K K E L   F LRTDS Y    A   L     +GRL+ WQ+   QY   ++YIK E NS
Sbjct: 572 KWKAELLPKEFTLRTDSSYVTGFARHNLKANYNQGRLVRWQLEFLQYPARVEYIKGEKNS 631

Query: 351 FADTLTREW 325
            ADTLTREW
Sbjct: 632 LADTLTREW 640