BLASTX nr result

ID: Chrysanthemum22_contig00011568 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00011568
         (421 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023740616.1| F-box protein At4g19940-like [Lactuca sativa...    58   5e-07

>ref|XP_023740616.1| F-box protein At4g19940-like [Lactuca sativa]
 gb|PLY68581.1| hypothetical protein LSAT_2X9961 [Lactuca sativa]
          Length = 394

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 47/137 (34%), Positives = 63/137 (45%), Gaps = 12/137 (8%)
 Frame = -3

Query: 419 DLLDSLTNELYM--FVSKLRESLVVYGSIYVEGAECCGVWVMEH--DSSFRKLFSIGARV 252
           DL ++L N+ Y+   +SK+ ESL V         + C VWV +H   + F+KLF+I A  
Sbjct: 260 DLPENLANQSYLNLSISKVCESLAVLEYATNMMNQVCNVWVKDHGFQNLFKKLFTISAPY 319

Query: 251 EKYWGLG--------RMVNLYLKF*RRMDNLPLHVYDPCSQEIKNLGISRVEGSFFMGSY 96
                LG          V  Y K     +   L VY+P    I N+GIS   GSFF+GSY
Sbjct: 320 ASIRALGFTKSGEPMMEVKDYYK-----EAAALVVYEPSLGYINNIGISGNYGSFFVGSY 374

Query: 95  KEXXXXXXXXXXHIYSN 45
            E           +YSN
Sbjct: 375 METLLLLDQADCSVYSN 391


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