BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00011495
         (503 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH97396.1| CID domain-containing protein, partial [Cynara ca...   252   3e-75
ref|XP_022036926.1| polyadenylation and cleavage factor homolog ...   237   2e-70
gb|KVH97398.1| CID domain-containing protein [Cynara cardunculus...   226   8e-66
ref|XP_023742741.1| polyadenylation and cleavage factor homolog ...   220   4e-64
ref|XP_021637406.1| polyadenylation and cleavage factor homolog ...   209   8e-60
gb|KJB67157.1| hypothetical protein B456_010G178200 [Gossypium r...   208   9e-60
ref|XP_021600025.1| polyadenylation and cleavage factor homolog ...   208   2e-59
gb|KJB67159.1| hypothetical protein B456_010G178200 [Gossypium r...   208   2e-59
ref|XP_012450329.1| PREDICTED: polyadenylation and cleavage fact...   208   3e-59
ref|XP_012450328.1| PREDICTED: polyadenylation and cleavage fact...   208   3e-59
gb|KJB67158.1| hypothetical protein B456_010G178200 [Gossypium r...   208   3e-59
ref|XP_012091393.1| polyadenylation and cleavage factor homolog ...   208   3e-59
ref|XP_007026008.2| PREDICTED: polyadenylation and cleavage fact...   207   5e-59
gb|EOY28630.1| PCF11P-similar protein 4, putative isoform 1 [The...   207   5e-59
ref|XP_016683609.1| PREDICTED: polyadenylation and cleavage fact...   207   7e-59
ref|XP_016683608.1| PREDICTED: polyadenylation and cleavage fact...   207   7e-59
gb|PON84864.1| RNA polymerase II-binding domain containing prote...   206   1e-58
ref|XP_022723650.1| polyadenylation and cleavage factor homolog ...   206   2e-58
ref|XP_017645983.1| PREDICTED: polyadenylation and cleavage fact...   205   2e-58
ref|XP_017645981.1| PREDICTED: polyadenylation and cleavage fact...   205   2e-58

>gb|KVH97396.1| CID domain-containing protein, partial [Cynara cardunculus var.
           scolymus]
          Length = 1024

 Score =  252 bits (644), Expect = 3e-75
 Identities = 131/180 (72%), Positives = 140/180 (77%), Gaps = 13/180 (7%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARIIEVPVE KLPSLYLLDSIVKNIG+DYVRHFSARLPEVYCLAYRQ+HPNMHPS
Sbjct: 169 ADAICARIIEVPVEQKLPSLYLLDSIVKNIGRDYVRHFSARLPEVYCLAYRQIHPNMHPS 228

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXGIKASESPRPAHGIHVNPKYLE--- 351
           MRHLFGTWSTVFPS VL KIE +LQF         G+KASESPRPAHGIHVNPKYLE   
Sbjct: 229 MRHLFGTWSTVFPSSVLCKIEAQLQFSPSASHQSSGLKASESPRPAHGIHVNPKYLEARR 288

Query: 352 ---------KI-HARTASTSEIHEQPATGIDEYEPDSRDVLSSHIGSHRLGSTSNVVCTP 501
                    KI  AR  STSEI EQP++G DEYE DSR+ LSSH GS +L  +SNV   P
Sbjct: 289 QFENSTTDSKIQQARATSTSEILEQPSSGFDEYESDSREALSSHTGSRKLDLSSNVGRNP 348


>ref|XP_022036926.1| polyadenylation and cleavage factor homolog 4 [Helianthus annuus]
 ref|XP_022036927.1| polyadenylation and cleavage factor homolog 4 [Helianthus annuus]
 gb|OTG23823.1| putative PCF11P-similar protein 4 [Helianthus annuus]
          Length = 886

 Score =  237 bits (605), Expect = 2e-70
 Identities = 121/168 (72%), Positives = 135/168 (80%), Gaps = 1/168 (0%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARIIEVPVE KLPSLYLLDSIVKNIG+DY+RHFSARLPEV+C AYRQVHP++HPS
Sbjct: 106 ADAICARIIEVPVEQKLPSLYLLDSIVKNIGRDYIRHFSARLPEVFCAAYRQVHPSLHPS 165

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXGIKASESPRPAHGIHVNPKYLEKI- 357
           MRHLFGTWSTVFPS VLRKIE++LQF          ++ SESPRPAHGIHVNPKYLEKI 
Sbjct: 166 MRHLFGTWSTVFPSSVLRKIESQLQFSPSSSYQPSTLRDSESPRPAHGIHVNPKYLEKIQ 225

Query: 358 HARTASTSEIHEQPATGIDEYEPDSRDVLSSHIGSHRLGSTSNVVCTP 501
           HAR AS  +I       +DEYE D+ DV SSHIG+  LG TS+V  TP
Sbjct: 226 HARAASAPKI-------LDEYESDNGDVASSHIGAKSLGPTSHVGRTP 266


>gb|KVH97398.1| CID domain-containing protein [Cynara cardunculus var. scolymus]
          Length = 954

 Score =  226 bits (575), Expect = 8e-66
 Identities = 119/176 (67%), Positives = 130/176 (73%), Gaps = 13/176 (7%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARIIEVPVE KLPSLYLLDSIVKNIG++YVRHFSARLPEVYC AYRQVHP++HPS
Sbjct: 109 ADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRHFSARLPEVYCAAYRQVHPSLHPS 168

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXGIKASESPRPAHGIHVNPKYLE--- 351
           MRHLFGTW+TVFPS VLRKIET+LQF         G+K SESPRPAHGIHVNPKYLE   
Sbjct: 169 MRHLFGTWATVFPSSVLRKIETQLQFSPPSSYQSSGLKDSESPRPAHGIHVNPKYLEARR 228

Query: 352 ---------KI-HARTASTSEIHEQPATGIDEYEPDSRDVLSSHIGSHRLGSTSNV 489
                    KI HAR  S  +I  QP TG DEYE D+        G   LGSTS++
Sbjct: 229 QLESSTADSKIQHARANSAPKILGQPCTGFDEYESDN--------GEQSLGSTSHI 276


>ref|XP_023742741.1| polyadenylation and cleavage factor homolog 4 [Lactuca sativa]
 gb|PLY66896.1| hypothetical protein LSAT_7X17321 [Lactuca sativa]
          Length = 883

 Score =  220 bits (561), Expect = 4e-64
 Identities = 115/180 (63%), Positives = 129/180 (71%), Gaps = 13/180 (7%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARIIEVPVE KLPSLYLLDSIVKNIG+DYVRHFSARLPEVYC AYRQVHP++HPS
Sbjct: 109 ADAICARIIEVPVEQKLPSLYLLDSIVKNIGRDYVRHFSARLPEVYCAAYRQVHPSLHPS 168

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXGIKASESPRPAHGIHVNPKYLEK-- 354
           MRHLFGTWSTVFP+ VLRKIE++LQF         G+K +ESP+PAHGIHVNPKYLE   
Sbjct: 169 MRHLFGTWSTVFPASVLRKIESQLQFSPSPSYQSSGLKDAESPKPAHGIHVNPKYLEARR 228

Query: 355 -----------IHARTASTSEIHEQPATGIDEYEPDSRDVLSSHIGSHRLGSTSNVVCTP 501
                       HAR  ST +I  QP+T  DEYE D+            +GSTS +  TP
Sbjct: 229 QLESSSTDTKLQHARPISTPKILGQPSTAFDEYETDN---------GQSIGSTSQLGHTP 279


>ref|XP_021637406.1| polyadenylation and cleavage factor homolog 4-like isoform X1
           [Hevea brasiliensis]
          Length = 1024

 Score =  209 bits (533), Expect = 8e-60
 Identities = 109/177 (61%), Positives = 133/177 (75%), Gaps = 14/177 (7%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARIIEVPV+ KLPSLYLLDSIVKNIG++YV++FS+RLPEV+C AYRQVHPN++PS
Sbjct: 104 ADAICARIIEVPVDQKLPSLYLLDSIVKNIGREYVKYFSSRLPEVFCEAYRQVHPNLYPS 163

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXG---IKASESPRPAHGIHVNPKYLE 351
           MRHLFGTWSTVFP  VL KIET+LQF         G   +KAS+SPRP HGIHVNPKYL 
Sbjct: 164 MRHLFGTWSTVFPPSVLSKIETQLQFSPQVNSQSSGLSSLKASDSPRPTHGIHVNPKYLR 223

Query: 352 KI---------HARTA-STSEIH-EQPATGIDEYEPDSRDVLSSHIGSHRLGSTSNV 489
           ++         H R A ST +I+ ++PA G DEY+ D  +V SS +G+ RL +  +V
Sbjct: 224 QLEHSSDNNAQHVRGASSTLKIYSKKPAIGYDEYDSDHAEVKSSQVGAQRLNTAGSV 280


>gb|KJB67157.1| hypothetical protein B456_010G178200 [Gossypium raimondii]
          Length = 831

 Score =  208 bits (529), Expect = 9e-60
 Identities = 106/182 (58%), Positives = 128/182 (70%), Gaps = 16/182 (8%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARIIEVPVE KLPSLYLLDSIVKNIG++YVR+FS+RLPEV+C AYRQV+PN+HP+
Sbjct: 86  ADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPA 145

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXGI---KASESPRPAHGIHVNPKYLE 351
           MRHLFGTWSTVFP  VLRKIE +LQF         G+   ++SESPRP HGIHVNPKYL 
Sbjct: 146 MRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSESPRPTHGIHVNPKYLR 205

Query: 352 KIHARTASTSEIH-------------EQPATGIDEYEPDSRDVLSSHIGSHRLGSTSNVV 492
           +   ++ + S                ++     DE++ D  +V SSH+G  RL ST NV 
Sbjct: 206 QFEQQSGADSNTQHVRGMSAGQKLYGQKHTITYDEFDSDHTEVPSSHVGVQRLSSTGNVG 265

Query: 493 CT 498
           CT
Sbjct: 266 CT 267


>ref|XP_021600025.1| polyadenylation and cleavage factor homolog 4 [Manihot esculenta]
 gb|OAY24701.1| hypothetical protein MANES_17G036600 [Manihot esculenta]
          Length = 1027

 Score =  208 bits (530), Expect = 2e-59
 Identities = 107/177 (60%), Positives = 129/177 (72%), Gaps = 14/177 (7%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARIIEVPVE KLPSLYLLDSIVKNIG++YVRHFS+RLPEV+C AYRQ+HPN++ S
Sbjct: 105 ADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRHFSSRLPEVFCEAYRQIHPNLYHS 164

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXG---IKASESPRPAHGIHVNPKYLE 351
           MRHLFGTWSTVFP  VLRKIET+LQF         G   +KAS+S RP HGIHVNPKYL 
Sbjct: 165 MRHLFGTWSTVFPPSVLRKIETQLQFSPQVNSQSSGLPSLKASDSSRPTHGIHVNPKYLR 224

Query: 352 KIHART----------ASTSEIHEQ-PATGIDEYEPDSRDVLSSHIGSHRLGSTSNV 489
           ++   +          +ST +I+ Q PA G DEY+ D  ++ SS +G  RL +  +V
Sbjct: 225 QLEHSSDNNAQNVRGASSTIKIYSQKPAIGYDEYDSDHAEITSSQVGGQRLSTAGSV 281


>gb|KJB67159.1| hypothetical protein B456_010G178200 [Gossypium raimondii]
          Length = 980

 Score =  208 bits (529), Expect = 2e-59
 Identities = 106/182 (58%), Positives = 128/182 (70%), Gaps = 16/182 (8%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARIIEVPVE KLPSLYLLDSIVKNIG++YVR+FS+RLPEV+C AYRQV+PN+HP+
Sbjct: 62  ADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPA 121

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXGI---KASESPRPAHGIHVNPKYLE 351
           MRHLFGTWSTVFP  VLRKIE +LQF         G+   ++SESPRP HGIHVNPKYL 
Sbjct: 122 MRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSESPRPTHGIHVNPKYLR 181

Query: 352 KIHARTASTSEIH-------------EQPATGIDEYEPDSRDVLSSHIGSHRLGSTSNVV 492
           +   ++ + S                ++     DE++ D  +V SSH+G  RL ST NV 
Sbjct: 182 QFEQQSGADSNTQHVRGMSAGQKLYGQKHTITYDEFDSDHTEVPSSHVGVQRLSSTGNVG 241

Query: 493 CT 498
           CT
Sbjct: 242 CT 243


>ref|XP_012450329.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Gossypium raimondii]
          Length = 1001

 Score =  208 bits (529), Expect = 3e-59
 Identities = 106/182 (58%), Positives = 128/182 (70%), Gaps = 16/182 (8%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARIIEVPVE KLPSLYLLDSIVKNIG++YVR+FS+RLPEV+C AYRQV+PN+HP+
Sbjct: 86  ADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPA 145

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXGI---KASESPRPAHGIHVNPKYLE 351
           MRHLFGTWSTVFP  VLRKIE +LQF         G+   ++SESPRP HGIHVNPKYL 
Sbjct: 146 MRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSESPRPTHGIHVNPKYLR 205

Query: 352 KIHARTASTSEIH-------------EQPATGIDEYEPDSRDVLSSHIGSHRLGSTSNVV 492
           +   ++ + S                ++     DE++ D  +V SSH+G  RL ST NV 
Sbjct: 206 QFEQQSGADSNTQHVRGMSAGQKLYGQKHTITYDEFDSDHTEVPSSHVGVQRLSSTGNVG 265

Query: 493 CT 498
           CT
Sbjct: 266 CT 267


>ref|XP_012450328.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Gossypium raimondii]
 gb|KJB67156.1| hypothetical protein B456_010G178200 [Gossypium raimondii]
          Length = 1004

 Score =  208 bits (529), Expect = 3e-59
 Identities = 106/182 (58%), Positives = 128/182 (70%), Gaps = 16/182 (8%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARIIEVPVE KLPSLYLLDSIVKNIG++YVR+FS+RLPEV+C AYRQV+PN+HP+
Sbjct: 86  ADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPA 145

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXGI---KASESPRPAHGIHVNPKYLE 351
           MRHLFGTWSTVFP  VLRKIE +LQF         G+   ++SESPRP HGIHVNPKYL 
Sbjct: 146 MRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSESPRPTHGIHVNPKYLR 205

Query: 352 KIHARTASTSEIH-------------EQPATGIDEYEPDSRDVLSSHIGSHRLGSTSNVV 492
           +   ++ + S                ++     DE++ D  +V SSH+G  RL ST NV 
Sbjct: 206 QFEQQSGADSNTQHVRGMSAGQKLYGQKHTITYDEFDSDHTEVPSSHVGVQRLSSTGNVG 265

Query: 493 CT 498
           CT
Sbjct: 266 CT 267


>gb|KJB67158.1| hypothetical protein B456_010G178200 [Gossypium raimondii]
          Length = 1024

 Score =  208 bits (529), Expect = 3e-59
 Identities = 106/182 (58%), Positives = 128/182 (70%), Gaps = 16/182 (8%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARIIEVPVE KLPSLYLLDSIVKNIG++YVR+FS+RLPEV+C AYRQV+PN+HP+
Sbjct: 86  ADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPA 145

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXGI---KASESPRPAHGIHVNPKYLE 351
           MRHLFGTWSTVFP  VLRKIE +LQF         G+   ++SESPRP HGIHVNPKYL 
Sbjct: 146 MRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSESPRPTHGIHVNPKYLR 205

Query: 352 KIHARTASTSEIH-------------EQPATGIDEYEPDSRDVLSSHIGSHRLGSTSNVV 492
           +   ++ + S                ++     DE++ D  +V SSH+G  RL ST NV 
Sbjct: 206 QFEQQSGADSNTQHVRGMSAGQKLYGQKHTITYDEFDSDHTEVPSSHVGVQRLSSTGNVG 265

Query: 493 CT 498
           CT
Sbjct: 266 CT 267


>ref|XP_012091393.1| polyadenylation and cleavage factor homolog 4 [Jatropha curcas]
 gb|KDP20781.1| hypothetical protein JCGZ_21252 [Jatropha curcas]
          Length = 1029

 Score =  208 bits (529), Expect = 3e-59
 Identities = 109/179 (60%), Positives = 130/179 (72%), Gaps = 16/179 (8%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARIIEVPVE KLPSLYLLDSIVKNIG+DYVR+FS RLPEV+C AYRQVHPN++PS
Sbjct: 104 ADAICARIIEVPVEQKLPSLYLLDSIVKNIGRDYVRYFSTRLPEVFCEAYRQVHPNLYPS 163

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXG---IKASESPRPAHGIHVNPKYLE 351
           MRHLFGTWS+VFP  VL KIET+LQF         G   +KAS+SPRP HGIHVNPKYL 
Sbjct: 164 MRHLFGTWSSVFPPSVLGKIETQLQFSPQVNSQSSGLSSLKASDSPRPTHGIHVNPKYLR 223

Query: 352 KI-----------HARTA-STSEIH-EQPATGIDEYEPDSRDVLSSHIGSHRLGSTSNV 489
           ++           H R A ST +++ ++PA   DEY+ D  +V SS +G+ RL +   V
Sbjct: 224 QLENSTSDNNAQQHVRGASSTLKVYGQKPAIAYDEYDSDHAEVTSSQVGAQRLNTVGTV 282


>ref|XP_007026008.2| PREDICTED: polyadenylation and cleavage factor homolog 4 [Theobroma
           cacao]
          Length = 1001

 Score =  207 bits (527), Expect = 5e-59
 Identities = 104/179 (58%), Positives = 129/179 (72%), Gaps = 16/179 (8%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARI+EVPVE KLPSLYLLDSIVKNIG++YVRHFS+RLPEV+C AYRQV+PN++P+
Sbjct: 83  ADAICARILEVPVEQKLPSLYLLDSIVKNIGREYVRHFSSRLPEVFCEAYRQVNPNLYPA 142

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXGI---KASESPRPAHGIHVNPKYLE 351
           MRHLFGTWSTVFP  VLRKIE +LQF         G+   ++SESPRP HGIHVNPKYL 
Sbjct: 143 MRHLFGTWSTVFPPSVLRKIEIQLQFSQSANQQSPGVTSLRSSESPRPTHGIHVNPKYLR 202

Query: 352 KIHARTASTSEIH-------------EQPATGIDEYEPDSRDVLSSHIGSHRLGSTSNV 489
           ++  ++ + S                ++ + G DE++ D  +V SSH+G  RL ST NV
Sbjct: 203 QLEQQSGADSNTQHVRGTSAALKVYGQKHSIGFDEFDSDHTEVPSSHVGVRRLRSTGNV 261


>gb|EOY28630.1| PCF11P-similar protein 4, putative isoform 1 [Theobroma cacao]
          Length = 1004

 Score =  207 bits (527), Expect = 5e-59
 Identities = 104/179 (58%), Positives = 129/179 (72%), Gaps = 16/179 (8%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARI+EVPVE KLPSLYLLDSIVKNIG++YVRHFS+RLPEV+C AYRQV+PN++P+
Sbjct: 86  ADAICARILEVPVEQKLPSLYLLDSIVKNIGREYVRHFSSRLPEVFCEAYRQVNPNLYPA 145

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXGI---KASESPRPAHGIHVNPKYLE 351
           MRHLFGTWSTVFP  VLRKIE +LQF         G+   ++SESPRP HGIHVNPKYL 
Sbjct: 146 MRHLFGTWSTVFPPSVLRKIEIQLQFSQSANQQSPGVTSLRSSESPRPTHGIHVNPKYLR 205

Query: 352 KIHARTASTSEIH-------------EQPATGIDEYEPDSRDVLSSHIGSHRLGSTSNV 489
           ++  ++ + S                ++ + G DE++ D  +V SSH+G  RL ST NV
Sbjct: 206 QLEQQSGADSNTQHVRGTSAALKVYGQKHSIGFDEFDSDHTEVPSSHVGVRRLRSTGNV 264


>ref|XP_016683609.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X2 [Gossypium hirsutum]
          Length = 1004

 Score =  207 bits (526), Expect = 7e-59
 Identities = 105/182 (57%), Positives = 127/182 (69%), Gaps = 16/182 (8%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARIIEVPVE KLPSLYLLDSIVKNIG++YVR+FS+RLPEV+C AYRQV+PN+HP+
Sbjct: 86  ADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPA 145

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXGI---KASESPRPAHGIHVNPKYLE 351
           MRHLFGTWSTVFP  VL KIE +LQF         G+   ++SESPRP HGIHVNPKYL 
Sbjct: 146 MRHLFGTWSTVFPPSVLHKIEMQLQFSQTGNQQSSGVTSLQSSESPRPTHGIHVNPKYLR 205

Query: 352 KIHARTASTSEIH-------------EQPATGIDEYEPDSRDVLSSHIGSHRLGSTSNVV 492
           +   ++ + S                ++     DE++ D  +V SSH+G  RL ST NV 
Sbjct: 206 QFEQQSGADSNTQHVRGMSAGQKLYGQKHTIAYDEFDSDHTEVPSSHVGVQRLSSTGNVG 265

Query: 493 CT 498
           CT
Sbjct: 266 CT 267


>ref|XP_016683608.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X1 [Gossypium hirsutum]
          Length = 1024

 Score =  207 bits (526), Expect = 7e-59
 Identities = 105/182 (57%), Positives = 127/182 (69%), Gaps = 16/182 (8%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARIIEVPVE KLPSLYLLDSIVKNIG++YVR+FS+RLPEV+C AYRQV+PN+HP+
Sbjct: 86  ADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPA 145

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXGI---KASESPRPAHGIHVNPKYLE 351
           MRHLFGTWSTVFP  VL KIE +LQF         G+   ++SESPRP HGIHVNPKYL 
Sbjct: 146 MRHLFGTWSTVFPPSVLHKIEMQLQFSQTGNQQSSGVTSLQSSESPRPTHGIHVNPKYLR 205

Query: 352 KIHARTASTSEIH-------------EQPATGIDEYEPDSRDVLSSHIGSHRLGSTSNVV 492
           +   ++ + S                ++     DE++ D  +V SSH+G  RL ST NV 
Sbjct: 206 QFEQQSGADSNTQHVRGMSAGQKLYGQKHTIAYDEFDSDHTEVPSSHVGVQRLSSTGNVG 265

Query: 493 CT 498
           CT
Sbjct: 266 CT 267


>gb|PON84864.1| RNA polymerase II-binding domain containing protein [Trema
           orientalis]
          Length = 988

 Score =  206 bits (524), Expect = 1e-58
 Identities = 105/177 (59%), Positives = 129/177 (72%), Gaps = 14/177 (7%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARI+EVPV+ KLPSLYLLDSIVKNIG+DYV++FS+RLPEV+C AYRQVHP+ HP+
Sbjct: 120 ADAICARILEVPVDQKLPSLYLLDSIVKNIGRDYVKYFSSRLPEVFCEAYRQVHPSQHPA 179

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQF---XXXXXXXXXGIKASESPRPAHGIHVNPKYLE 351
           MRHLFGTWS VFP  VL KIE +LQF             ++ASESPRP HGIHVNPKYL 
Sbjct: 180 MRHLFGTWSAVFPPSVLHKIEAQLQFSPAVNQQSSRLPPLRASESPRPTHGIHVNPKYLR 239

Query: 352 KI----------HARTASTSEIHEQ-PATGIDEYEPDSRDVLSSHIGSHRLGSTSNV 489
           ++          HA   S  +I+ Q PA G +E++ +  DV+SSH+G+ RL ST +V
Sbjct: 240 QVEHSAADSHIQHADGTSALKIYAQKPAIGYEEFDLNYEDVVSSHVGAQRLSSTGSV 296


>ref|XP_022723650.1| polyadenylation and cleavage factor homolog 4-like isoform X2
           [Durio zibethinus]
          Length = 1031

 Score =  206 bits (523), Expect = 2e-58
 Identities = 107/179 (59%), Positives = 130/179 (72%), Gaps = 16/179 (8%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARI+E PVE KLPSLYLLDSIVKNIG++YVRHFS+RLPEV+  AYRQV+PN+HP+
Sbjct: 118 ADAICARIVEAPVEQKLPSLYLLDSIVKNIGREYVRHFSSRLPEVFREAYRQVNPNLHPA 177

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXG---IKASESPRPAHGIHVNPKYLE 351
           MRHLFGTWSTVFPSPVLRKIE  LQF         G   +++SESP PAHGIHVNPKYL 
Sbjct: 178 MRHLFGTWSTVFPSPVLRKIEVRLQFSQSANQQSPGLASLQSSESPGPAHGIHVNPKYLR 237

Query: 352 KIHART-ASTSEIH------------EQPATGIDEYEPDSRDVLSSHIGSHRLGSTSNV 489
           ++  ++ A T+  H            ++ + G DE++ D  +V SSH+G  RL ST NV
Sbjct: 238 QLEQQSGADTNTQHVRGPSEGLKLYSQKHSIGYDEFDSDHTEVPSSHVGVLRLSSTGNV 296


>ref|XP_017645983.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Gossypium arboreum]
          Length = 1001

 Score =  205 bits (522), Expect = 2e-58
 Identities = 104/179 (58%), Positives = 127/179 (70%), Gaps = 16/179 (8%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARIIEVPVE KLPSLYLLDSIVKNIG++YVR+FS+RLPEV+C AYRQV+PN+HP+
Sbjct: 86  ADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPA 145

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXGI---KASESPRPAHGIHVNPKYLE 351
           MRHLFGTWSTVFP  VLRKIE +LQF         G+   ++SESPRP HGIHVNPKYL 
Sbjct: 146 MRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSESPRPTHGIHVNPKYLR 205

Query: 352 KIHARTASTSEIH-------------EQPATGIDEYEPDSRDVLSSHIGSHRLGSTSNV 489
           ++  ++ + S                ++     DE++ D  +V SSH+G  RL ST NV
Sbjct: 206 QLEQQSGADSNTQHVRGMSAGQKLYGQKHTIAYDEFDSDHTEVPSSHVGVQRLSSTGNV 264


>ref|XP_017645981.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Gossypium arboreum]
 gb|KHG24664.1| Pre-mRNA cleavage complex 2 Pcf11 [Gossypium arboreum]
          Length = 1004

 Score =  205 bits (522), Expect = 2e-58
 Identities = 104/179 (58%), Positives = 127/179 (70%), Gaps = 16/179 (8%)
 Frame = +1

Query: 1   ADAICARIIEVPVEHKLPSLYLLDSIVKNIGKDYVRHFSARLPEVYCLAYRQVHPNMHPS 180
           ADAICARIIEVPVE KLPSLYLLDSIVKNIG++YVR+FS+RLPEV+C AYRQV+PN+HP+
Sbjct: 86  ADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPA 145

Query: 181 MRHLFGTWSTVFPSPVLRKIETELQFXXXXXXXXXGI---KASESPRPAHGIHVNPKYLE 351
           MRHLFGTWSTVFP  VLRKIE +LQF         G+   ++SESPRP HGIHVNPKYL 
Sbjct: 146 MRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSESPRPTHGIHVNPKYLR 205

Query: 352 KIHARTASTSEIH-------------EQPATGIDEYEPDSRDVLSSHIGSHRLGSTSNV 489
           ++  ++ + S                ++     DE++ D  +V SSH+G  RL ST NV
Sbjct: 206 QLEQQSGADSNTQHVRGMSAGQKLYGQKHTIAYDEFDSDHTEVPSSHVGVQRLSSTGNV 264