BLASTX nr result

ID: Chrysanthemum22_contig00011430 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00011430
         (494 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023741762.1| pre-mRNA-splicing factor ATP-dependent RNA h...    79   6e-14
gb|KVH97857.1| DNA/RNA helicase, DEAD/DEAH box type, N-terminal ...    66   2e-09
ref|XP_021999250.1| pre-mRNA-splicing factor ATP-dependent RNA h...    62   6e-08
ref|XP_010025330.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    57   2e-06
ref|XP_010025329.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    57   2e-06
ref|XP_010025328.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    57   2e-06
gb|KZM82819.1| hypothetical protein DCAR_030388 [Daucus carota s...    56   4e-06
ref|XP_017226512.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    56   4e-06
ref|XP_017226511.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    56   4e-06
ref|XP_012831672.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    56   6e-06
gb|EYU42101.1| hypothetical protein MIMGU_mgv1a000307mg [Erythra...    56   6e-06

>ref|XP_023741762.1| pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 [Lactuca
           sativa]
 ref|XP_023741763.1| pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 [Lactuca
           sativa]
 ref|XP_023741765.1| pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 [Lactuca
           sativa]
          Length = 1264

 Score = 79.0 bits (193), Expect = 6e-14
 Identities = 46/71 (64%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
 Frame = -1

Query: 302 KSLLGLYVFASAKRVEGSFKVPKPKVSSMMASIDEDM*K--SSLADQDDDGSGVSSNGQN 129
           KSLLGL   ASAKR EGSFKVPK K+SSMM S+DED+ K  SSL   D+ GSGVSS+G+N
Sbjct: 40  KSLLGLDALASAKRAEGSFKVPKEKISSMMTSLDEDVEKTTSSLTGLDEVGSGVSSSGRN 99

Query: 128 -KSRKYRLTNG 99
             SR+YR + G
Sbjct: 100 YTSRQYRDSTG 110


>gb|KVH97857.1| DNA/RNA helicase, DEAD/DEAH box type, N-terminal [Cynara
           cardunculus var. scolymus]
          Length = 1256

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 42/75 (56%), Positives = 53/75 (70%), Gaps = 7/75 (9%)
 Frame = -1

Query: 302 KSLLGLYVFASAKR----VEGSFKVPKPKVSSMMASIDEDM*KSS--LADQDDDGSGVSS 141
           KSLLGL V A  KR    VEGSFKVP+ K SSM+A +DE++ KS+  L   D+ GSGVSS
Sbjct: 40  KSLLGLDVLAIEKRGGSQVEGSFKVPREKASSMLAYLDEEVEKSTSLLTGLDEVGSGVSS 99

Query: 140 NGQN-KSRKYRLTNG 99
           +G+N  SR+YR + G
Sbjct: 100 SGRNFSSRRYRDSGG 114


>ref|XP_021999250.1| pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7
           [Helianthus annuus]
 gb|OTG06408.1| putative RNA helicase family protein [Helianthus annuus]
          Length = 1283

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/76 (50%), Positives = 54/76 (71%), Gaps = 8/76 (10%)
 Frame = -1

Query: 302 KSLLGLYVFASAKR----VEGSFKVPKPKVSSMMASIDEDM*K--SSLADQDDDGSGVSS 141
           KSLLGL V A+AKR    V+GSFKVPK K+SSMMAS+D+++    S++   D+  +G SS
Sbjct: 40  KSLLGLDVLANAKRAGTHVDGSFKVPKEKISSMMASMDDEVENAMSTVTGPDEVDNGTSS 99

Query: 140 NG--QNKSRKYRLTNG 99
           +G   + SR+YR ++G
Sbjct: 100 SGARNSSSRRYRDSSG 115


>ref|XP_010025330.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           DEAH7 isoform X3 [Eucalyptus grandis]
          Length = 1264

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
 Frame = -1

Query: 302 KSLLGLYVFASAKR----VEGSFKVPKPKVSSMMASIDEDM*KSSLADQDDDGSGVSSNG 135
           KSLLGL V A+AKR    V+  FKVPK +V+S+++SIDE+  KS L+  D++ S + +  
Sbjct: 33  KSLLGLDVLANAKRAGSKVDDGFKVPKERVTSVVSSIDEEE-KSELSGLDEEESDIVNGA 91

Query: 134 QNKSRKYRLTNGPVN 90
           +N +R+YR T    N
Sbjct: 92  RNTNRRYRETAASKN 106


>ref|XP_010025329.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           DEAH7 isoform X2 [Eucalyptus grandis]
          Length = 1268

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
 Frame = -1

Query: 302 KSLLGLYVFASAKR----VEGSFKVPKPKVSSMMASIDEDM*KSSLADQDDDGSGVSSNG 135
           KSLLGL V A+AKR    V+  FKVPK +V+S+++SIDE+  KS L+  D++ S + +  
Sbjct: 33  KSLLGLDVLANAKRAGSKVDDGFKVPKERVTSVVSSIDEEE-KSELSGLDEEESDIVNGA 91

Query: 134 QNKSRKYRLTNGPVN 90
           +N +R+YR T    N
Sbjct: 92  RNTNRRYRETAASKN 106


>ref|XP_010025328.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           DEAH7 isoform X1 [Eucalyptus grandis]
 gb|KCW61967.1| hypothetical protein EUGRSUZ_H04653 [Eucalyptus grandis]
          Length = 1271

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
 Frame = -1

Query: 302 KSLLGLYVFASAKR----VEGSFKVPKPKVSSMMASIDEDM*KSSLADQDDDGSGVSSNG 135
           KSLLGL V A+AKR    V+  FKVPK +V+S+++SIDE+  KS L+  D++ S + +  
Sbjct: 33  KSLLGLDVLANAKRAGSKVDDGFKVPKERVTSVVSSIDEEE-KSELSGLDEEESDIVNGA 91

Query: 134 QNKSRKYRLTNGPVN 90
           +N +R+YR T    N
Sbjct: 92  RNTNRRYRETAASKN 106


>gb|KZM82819.1| hypothetical protein DCAR_030388 [Daucus carota subsp. sativus]
          Length = 1247

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
 Frame = -1

Query: 302 KSLLGLYVFASAKRVE---GSFKVPKPKVSSMMASIDEDM*KSSLADQDDDGSGVSSNGQ 132
           KS LGL V A AKR E   G FKVPK K+SS+ AS+DE++  S L++ DD G   SS   
Sbjct: 32  KSRLGLDVLAEAKRGEKADGVFKVPKDKMSSIAASMDEEV--SELSEVDDVGINGSSKVG 89

Query: 131 NKSRKYRLTNGPVNHT 84
           N +RKYR  +  V+HT
Sbjct: 90  NTNRKYR--DHGVSHT 103


>ref|XP_017226512.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           DEAH7-like isoform X2 [Daucus carota subsp. sativus]
          Length = 1266

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
 Frame = -1

Query: 302 KSLLGLYVFASAKRVE---GSFKVPKPKVSSMMASIDEDM*KSSLADQDDDGSGVSSNGQ 132
           KS LGL V A AKR E   G FKVPK K+SS+ AS+DE++  S L++ DD G   SS   
Sbjct: 32  KSRLGLDVLAEAKRGEKADGVFKVPKDKMSSIAASMDEEV--SELSEVDDVGINGSSKVG 89

Query: 131 NKSRKYRLTNGPVNHT 84
           N +RKYR  +  V+HT
Sbjct: 90  NTNRKYR--DHGVSHT 103


>ref|XP_017226511.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           DEAH7-like isoform X1 [Daucus carota subsp. sativus]
          Length = 1281

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
 Frame = -1

Query: 302 KSLLGLYVFASAKRVE---GSFKVPKPKVSSMMASIDEDM*KSSLADQDDDGSGVSSNGQ 132
           KS LGL V A AKR E   G FKVPK K+SS+ AS+DE++  S L++ DD G   SS   
Sbjct: 32  KSRLGLDVLAEAKRGEKADGVFKVPKDKMSSIAASMDEEV--SELSEVDDVGINGSSKVG 89

Query: 131 NKSRKYRLTNGPVNHT 84
           N +RKYR  +  V+HT
Sbjct: 90  NTNRKYR--DHGVSHT 103


>ref|XP_012831672.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16 [Erythranthe guttata]
          Length = 1267

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
 Frame = -1

Query: 302 KSLLGLYVFASAKR----VEGSFKVPKPKVSSMMASIDEDM*KSSLADQDDDGSGVSSNG 135
           KS+LGL V A+AKR    VEGSFKVPK +V+S+ AS+DED   SS    + D S  ++  
Sbjct: 44  KSILGLDVLANAKRLESKVEGSFKVPKERVASIAASLDEDEENSSSGIDEVDNSTSNTVR 103

Query: 134 QNKSRKYR--LTNGPVNHTSLVDQ 69
            + +R+YR   ++G  +  SLV +
Sbjct: 104 TSANRRYRELASSGASDSGSLVTE 127


>gb|EYU42101.1| hypothetical protein MIMGU_mgv1a000307mg [Erythranthe guttata]
          Length = 1272

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
 Frame = -1

Query: 302 KSLLGLYVFASAKR----VEGSFKVPKPKVSSMMASIDEDM*KSSLADQDDDGSGVSSNG 135
           KS+LGL V A+AKR    VEGSFKVPK +V+S+ AS+DED   SS    + D S  ++  
Sbjct: 31  KSILGLDVLANAKRLESKVEGSFKVPKERVASIAASLDEDEENSSSGIDEVDNSTSNTVR 90

Query: 134 QNKSRKYR--LTNGPVNHTSLVDQ 69
            + +R+YR   ++G  +  SLV +
Sbjct: 91  TSANRRYRELASSGASDSGSLVTE 114


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