BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00011207
         (726 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023756743.1| probable RNA-dependent RNA polymerase 5 [Lac...   367   e-116
ref|XP_022015556.1| probable RNA-dependent RNA polymerase 5 [Hel...   358   e-113
ref|XP_022017928.1| probable RNA-dependent RNA polymerase 3 isof...   248   8e-72
ref|XP_022017927.1| probable RNA-dependent RNA polymerase 3 isof...   248   9e-72
gb|KVG23917.1| RNA-dependent RNA polymerase, eukaryotic-type, pa...   232   1e-71
gb|KVH93864.1| RNA-dependent RNA polymerase, eukaryotic-type, pa...   237   1e-68
gb|PLY69096.1| hypothetical protein LSAT_5X144600 [Lactuca sativa]    238   1e-68
ref|XP_023739924.1| probable RNA-dependent RNA polymerase 5 isof...   238   2e-68
gb|PHT75307.1| hypothetical protein T459_18829 [Capsicum annuum]      220   5e-68
ref|XP_022017929.1| probable RNA-dependent RNA polymerase 5 isof...   236   6e-68
ref|XP_022893344.1| probable RNA-dependent RNA polymerase 5 isof...   233   2e-67
ref|XP_022893343.1| probable RNA-dependent RNA polymerase 5 isof...   233   2e-67
gb|PIN13666.1| RNA-directed RNA polymerase QDE-1 [Handroanthus i...   234   2e-67
ref|XP_016454734.1| PREDICTED: probable RNA-dependent RNA polyme...   231   3e-67
ref|XP_019078598.1| PREDICTED: probable RNA-dependent RNA polyme...   231   5e-67
ref|XP_016511902.1| PREDICTED: probable RNA-dependent RNA polyme...   233   7e-67
ref|XP_016511895.1| PREDICTED: probable RNA-dependent RNA polyme...   233   7e-67
ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polyme...   231   2e-66
ref|XP_009592437.1| PREDICTED: probable RNA-dependent RNA polyme...   231   2e-66
ref|XP_009592436.1| PREDICTED: probable RNA-dependent RNA polyme...   231   2e-66

>ref|XP_023756743.1| probable RNA-dependent RNA polymerase 5 [Lactuca sativa]
 gb|PLY90705.1| hypothetical protein LSAT_8X96860 [Lactuca sativa]
          Length = 1084

 Score =  367 bits (942), Expect = e-116
 Identities = 172/237 (72%), Positives = 212/237 (89%)
 Frame = +1

Query: 4    SAGTAADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPND 183
            +AGTAADS+M+FMD++L+LQ++D  +EK +  KK+L LIDLYYDALDA KSGKK+VIP +
Sbjct: 850  AAGTAADSWMSFMDRYLMLQEDDA-DEKRLLEKKMLTLIDLYYDALDASKSGKKVVIPRE 908

Query: 184  LKATRYPHYLHRKPEYHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSCLSL 363
            LKAT+YPH++ RKPEY STSILG IYD FQ CKNEK PVQEIWKL YF+I+ V DSCL +
Sbjct: 909  LKATQYPHHMGRKPEYRSTSILGLIYDQFQSCKNEKSPVQEIWKLPYFDIN-VSDSCLKI 967

Query: 364  WKERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNEALA 543
            WKERYE+Y+Q+M+NALKYN++SKNDAA+SV++KYKQ+LYGA DFKD+TRNI+ +Y EA+A
Sbjct: 968  WKERYESYKQEMSNALKYNDLSKNDAANSVLQKYKQLLYGALDFKDSTRNIDEIYEEAVA 1027

Query: 544  IYHVSYDYAKKRNDIAKCGFAWKVAGSALCAYHRKIHCMNTGDREITFVSSAFDGVF 714
            IYHVSY+YA +R D+AKCGFAWKVAGSALCAYHRKIHC+ TG+REITFVSSA DG++
Sbjct: 1028 IYHVSYEYAIRRKDVAKCGFAWKVAGSALCAYHRKIHCIKTGEREITFVSSALDGLY 1084


>ref|XP_022015556.1| probable RNA-dependent RNA polymerase 5 [Helianthus annuus]
 gb|OTF91152.1| putative RNA-dependent RNA polymerase family protein [Helianthus
            annuus]
          Length = 1089

 Score =  358 bits (919), Expect = e-113
 Identities = 175/239 (73%), Positives = 202/239 (84%), Gaps = 1/239 (0%)
 Frame = +1

Query: 1    SSAGTAADSYMAFMDQHLILQDND-TTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIP 177
            S  G  A+S+MAFMDQ+L LQD+D   +EK    KK+L LIDL+YDA+DA KSGKK+V+P
Sbjct: 852  SVVGITAESWMAFMDQYLTLQDDDGDDDEKRDIKKKMLHLIDLHYDAIDAAKSGKKVVVP 911

Query: 178  NDLKATRYPHYLHRKPEYHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSCL 357
            N+LKATRYPHY+ RKPEYHSTSILG+I+D FQ  KNEKLPVQEIWKL  FN+S +P SCL
Sbjct: 912  NNLKATRYPHYMGRKPEYHSTSILGKIFDQFQNRKNEKLPVQEIWKLPEFNVS-IPHSCL 970

Query: 358  SLWKERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNEA 537
            + W ERY  Y+Q+M+NALK  + SKNDAASSVI KYKQMLYGASDFKD+TRNIE VYNEA
Sbjct: 971  NTWNERYRTYKQEMSNALKDIDQSKNDAASSVITKYKQMLYGASDFKDSTRNIEDVYNEA 1030

Query: 538  LAIYHVSYDYAKKRNDIAKCGFAWKVAGSALCAYHRKIHCMNTGDREITFVSSAFDGVF 714
            LAIYHV+YDYAK   D+AKCGFAWKVAGSALCAYHRK HCM TG+REIT +SSAFDG+F
Sbjct: 1031 LAIYHVTYDYAKSIKDVAKCGFAWKVAGSALCAYHRKSHCMKTGEREITILSSAFDGIF 1089


>ref|XP_022017928.1| probable RNA-dependent RNA polymerase 3 isoform X2 [Helianthus
            annuus]
          Length = 1261

 Score =  248 bits (632), Expect = 8e-72
 Identities = 125/229 (54%), Positives = 165/229 (72%), Gaps = 2/229 (0%)
 Frame = +1

Query: 7    AGTAADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPNDL 186
            AG AADS+ AFMDQ+L+L +ND  +EK    +K+LKL DLYYDALDAPKSGK + IP  L
Sbjct: 1030 AGRAADSWQAFMDQYLVLGENDV-DEKRRIKEKLLKLADLYYDALDAPKSGKSVDIPQSL 1088

Query: 187  KATRYPHYLHRKPE--YHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSCLS 360
               +YPHYL + P   Y S+S+LG+IYD     + +   ++EIWKL  FN+ ++PDS LS
Sbjct: 1089 LPRKYPHYLEKFPNKSYSSSSVLGEIYDRAMAYQPDNALIREIWKLPCFNV-EIPDSILS 1147

Query: 361  LWKERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNEAL 540
            LWK RY++YR +M++AL+  + SKN++A  V+ KYK+MLY A +F  +TR IE +YN+AL
Sbjct: 1148 LWKNRYDSYRHEMSSALQSGDESKNNSADIVMNKYKKMLYEAENFASSTRKIEDIYNDAL 1207

Query: 541  AIYHVSYDYAKKRNDIAKCGFAWKVAGSALCAYHRKIHCMNTGDREITF 687
            AIYHVSYDYA +  ++AKCGFAWKVAG ALC+YH       T  R I+F
Sbjct: 1208 AIYHVSYDYAIRYANVAKCGFAWKVAGEALCSYHES----KTPGRSISF 1252


>ref|XP_022017927.1| probable RNA-dependent RNA polymerase 3 isoform X1 [Helianthus
            annuus]
 gb|OTF90819.1| putative RNA-dependent RNA polymerase, eukaryotic-type [Helianthus
            annuus]
          Length = 1336

 Score =  248 bits (632), Expect = 9e-72
 Identities = 125/229 (54%), Positives = 165/229 (72%), Gaps = 2/229 (0%)
 Frame = +1

Query: 7    AGTAADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPNDL 186
            AG AADS+ AFMDQ+L+L +ND  +EK    +K+LKL DLYYDALDAPKSGK + IP  L
Sbjct: 1105 AGRAADSWQAFMDQYLVLGENDV-DEKRRIKEKLLKLADLYYDALDAPKSGKSVDIPQSL 1163

Query: 187  KATRYPHYLHRKPE--YHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSCLS 360
               +YPHYL + P   Y S+S+LG+IYD     + +   ++EIWKL  FN+ ++PDS LS
Sbjct: 1164 LPRKYPHYLEKFPNKSYSSSSVLGEIYDRAMAYQPDNALIREIWKLPCFNV-EIPDSILS 1222

Query: 361  LWKERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNEAL 540
            LWK RY++YR +M++AL+  + SKN++A  V+ KYK+MLY A +F  +TR IE +YN+AL
Sbjct: 1223 LWKNRYDSYRHEMSSALQSGDESKNNSADIVMNKYKKMLYEAENFASSTRKIEDIYNDAL 1282

Query: 541  AIYHVSYDYAKKRNDIAKCGFAWKVAGSALCAYHRKIHCMNTGDREITF 687
            AIYHVSYDYA +  ++AKCGFAWKVAG ALC+YH       T  R I+F
Sbjct: 1283 AIYHVSYDYAIRYANVAKCGFAWKVAGEALCSYHES----KTPGRSISF 1327


>gb|KVG23917.1| RNA-dependent RNA polymerase, eukaryotic-type, partial [Cynara
           cardunculus var. scolymus]
          Length = 365

 Score =  232 bits (592), Expect = 1e-71
 Identities = 116/214 (54%), Positives = 154/214 (71%), Gaps = 2/214 (0%)
 Frame = +1

Query: 7   AGTAADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPNDL 186
           AG AADS+  FMD +L L +N   +EK    +K+LKL+DLYYDALDAPKSGKK+ IP  L
Sbjct: 139 AGKAADSWQTFMDHYLSLGEN-YADEKHRIKEKLLKLVDLYYDALDAPKSGKKVEIPKCL 197

Query: 187 KATRYPHYLHRKPE--YHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSCLS 360
              +YPH+L +K E  Y STS+LG+IYDA     +     Q+IWKL  FN+ ++P++ L+
Sbjct: 198 LPQKYPHFLEKKREMSYDSTSVLGKIYDAAIEYPSCNAIKQDIWKLPCFNV-EIPEASLN 256

Query: 361 LWKERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNEAL 540
           LW  RY +Y+Q+M NA+   + SK ++A+ VI+KYKQM Y A DF  +TR IE ++NEAL
Sbjct: 257 LWNNRYMSYKQEMCNAMNAGDESKTNSANIVIKKYKQMFYEAEDFATSTRKIEDLHNEAL 316

Query: 541 AIYHVSYDYAKKRNDIAKCGFAWKVAGSALCAYH 642
           AIYHV+YDYA+  ND+  CGFAWKVAG ALC++H
Sbjct: 317 AIYHVTYDYARSTNDVKXCGFAWKVAGEALCSFH 350


>gb|KVH93864.1| RNA-dependent RNA polymerase, eukaryotic-type, partial [Cynara
            cardunculus var. scolymus]
          Length = 1002

 Score =  237 bits (605), Expect = 1e-68
 Identities = 121/229 (52%), Positives = 161/229 (70%), Gaps = 2/229 (0%)
 Frame = +1

Query: 7    AGTAADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPNDL 186
            AG AADS+  FMD +L L +N   +EK    +K+LKL+DLYYDALDAPKSGKK+ IP  L
Sbjct: 773  AGKAADSWQTFMDHYLTLGEN-YADEKHRIKEKLLKLVDLYYDALDAPKSGKKVEIPKCL 831

Query: 187  KATRYPHYLHRKPE--YHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSCLS 360
               +YPH+L +K E  Y STS+LG+IYDA     +     Q+IWKL  FN+ ++P++ L+
Sbjct: 832  LPQKYPHFLEKKREMSYDSTSVLGKIYDAAIEYPSCNAVKQDIWKLPCFNV-EIPEASLN 890

Query: 361  LWKERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNEAL 540
            LWK RY +Y+Q+M NA+   + SK ++A+ VI+KYKQM Y A DF  +TR IE ++NEAL
Sbjct: 891  LWKNRYVSYKQEMCNAMNAGDESKTNSANIVIKKYKQMFYAAEDFATSTRKIEDLHNEAL 950

Query: 541  AIYHVSYDYAKKRNDIAKCGFAWKVAGSALCAYHRKIHCMNTGDREITF 687
            +IYHV+YDYA+  ND+ KCGFAWKVAG ALC++H     M T  + I F
Sbjct: 951  SIYHVTYDYARSTNDVKKCGFAWKVAGEALCSFHG----MKTPGKSIRF 995



 Score = 95.1 bits (235), Expect = 1e-18
 Identities = 50/120 (41%), Positives = 67/120 (55%), Gaps = 33/120 (27%)
 Frame = +1

Query: 382 AYRQDMTNALKYNEISKNDAASSVIEKYKQ------------------------------ 471
           +Y+Q+M NA+   + SK ++A+ VI+K K                               
Sbjct: 2   SYKQEMCNAMNAGDESKTNSANIVIKKSKFFEILFIELDSCMFQGITPKVEFEIESYLHL 61

Query: 472 ---MLYGASDFKDTTRNIEHVYNEALAIYHVSYDYAKKRNDIAKCGFAWKVAGSALCAYH 642
              M Y A DF  +TR IE ++NEALAIYHV+YDYA+  ND+ KCGFAWKVAG ALC++H
Sbjct: 62  HLFMFYEAEDFATSTRKIEDLHNEALAIYHVTYDYARSTNDVKKCGFAWKVAGEALCSFH 121


>gb|PLY69096.1| hypothetical protein LSAT_5X144600 [Lactuca sativa]
          Length = 1149

 Score =  238 bits (607), Expect = 1e-68
 Identities = 117/229 (51%), Positives = 164/229 (71%), Gaps = 2/229 (0%)
 Frame = +1

Query: 7    AGTAADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPNDL 186
            AG AAD+++ +MDQ+L L +ND  N K V  +K+LKL+DLYYDALDAPKSGK + IP  L
Sbjct: 918  AGKAADAWLTWMDQYLSLGENDVHN-KHVINEKLLKLVDLYYDALDAPKSGKTVEIPKYL 976

Query: 187  KATRYPHYLHRKPE--YHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSCLS 360
               +YPH+L +K +  Y+S+S+LG IYD  +    +   +Q+IWKL  FN+ ++P+ CL 
Sbjct: 977  LPQKYPHFLEKKIDKTYNSSSVLGIIYDTAKGYLPDNASIQDIWKLPCFNV-EIPEGCLD 1035

Query: 361  LWKERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNEAL 540
            LWK+ Y +YR +M++A+   + SK+++A+ VI+KYKQ+LYG  DF  ++R I+ +YNEAL
Sbjct: 1036 LWKKWYSSYRHEMSDAMNSGDESKHNSANIVIKKYKQLLYGTEDFATSSRKIDDIYNEAL 1095

Query: 541  AIYHVSYDYAKKRNDIAKCGFAWKVAGSALCAYHRKIHCMNTGDREITF 687
            AIYHVSYDYA+   D+ KCGFAWKVAG ALC++H     M T  + I F
Sbjct: 1096 AIYHVSYDYARTYGDVKKCGFAWKVAGEALCSFHE----MKTPGKSIPF 1140


>ref|XP_023739924.1| probable RNA-dependent RNA polymerase 5 isoform X1 [Lactuca sativa]
          Length = 1155

 Score =  238 bits (607), Expect = 2e-68
 Identities = 117/229 (51%), Positives = 164/229 (71%), Gaps = 2/229 (0%)
 Frame = +1

Query: 7    AGTAADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPNDL 186
            AG AAD+++ +MDQ+L L +ND  N K V  +K+LKL+DLYYDALDAPKSGK + IP  L
Sbjct: 924  AGKAADAWLTWMDQYLSLGENDVHN-KHVINEKLLKLVDLYYDALDAPKSGKTVEIPKYL 982

Query: 187  KATRYPHYLHRKPE--YHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSCLS 360
               +YPH+L +K +  Y+S+S+LG IYD  +    +   +Q+IWKL  FN+ ++P+ CL 
Sbjct: 983  LPQKYPHFLEKKIDKTYNSSSVLGIIYDTAKGYLPDNASIQDIWKLPCFNV-EIPEGCLD 1041

Query: 361  LWKERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNEAL 540
            LWK+ Y +YR +M++A+   + SK+++A+ VI+KYKQ+LYG  DF  ++R I+ +YNEAL
Sbjct: 1042 LWKKWYSSYRHEMSDAMNSGDESKHNSANIVIKKYKQLLYGTEDFATSSRKIDDIYNEAL 1101

Query: 541  AIYHVSYDYAKKRNDIAKCGFAWKVAGSALCAYHRKIHCMNTGDREITF 687
            AIYHVSYDYA+   D+ KCGFAWKVAG ALC++H     M T  + I F
Sbjct: 1102 AIYHVSYDYARTYGDVKKCGFAWKVAGEALCSFHE----MKTPGKSIPF 1146


>gb|PHT75307.1| hypothetical protein T459_18829 [Capsicum annuum]
          Length = 291

 Score =  220 bits (561), Expect = 5e-68
 Identities = 111/211 (52%), Positives = 149/211 (70%), Gaps = 2/211 (0%)
 Frame = +1

Query: 16  AADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPNDLKAT 195
           AADS++AFMD+ L+L+ +D  +E      K+L L+D+YYDALDAPKSGKK+ IP+DLKA 
Sbjct: 63  AADSWLAFMDRLLMLRGDDV-DEMHSLKGKMLHLVDIYYDALDAPKSGKKVSIPHDLKAN 121

Query: 196 RYPHYLHRKP--EYHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSCLSLWK 369
           ++PHY+ +     YHSTSILGQIYD      +E   V EI+KL  F + ++P +C+ LW+
Sbjct: 122 KFPHYMEKGNPFSYHSTSILGQIYDHVDSFPDEDFCVTEIYKLPCFEV-EIPPTCMELWR 180

Query: 370 ERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNEALAIY 549
            RYE Y++DMT A+      +  + + VI+KYK +LYGA +F+ T R  E V+NEALAIY
Sbjct: 181 GRYEEYKKDMTRAMSSGSELRITSCNEVIKKYKTLLYGAVEFEQTVRKTEDVFNEALAIY 240

Query: 550 HVSYDYAKKRNDIAKCGFAWKVAGSALCAYH 642
           HV+YD+A+    I KCGFAWKVAGSALC  H
Sbjct: 241 HVTYDHARTTCCIEKCGFAWKVAGSALCRIH 271


>ref|XP_022017929.1| probable RNA-dependent RNA polymerase 5 isoform X1 [Helianthus
            annuus]
          Length = 1116

 Score =  236 bits (602), Expect = 6e-68
 Identities = 118/229 (51%), Positives = 163/229 (71%), Gaps = 2/229 (0%)
 Frame = +1

Query: 7    AGTAADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPNDL 186
            AGTAADS+MA+MDQ+L L +ND  +EK     K++KL+DL+YDALDAPKSGK + IP  L
Sbjct: 885  AGTAADSWMAYMDQYLSLGENDV-DEKRRIKDKMMKLVDLFYDALDAPKSGKTVDIPQSL 943

Query: 187  KATRYPHYLHR--KPEYHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSCLS 360
             + +YPH++ +     Y+S+S+LG+IYD     + +   ++EIWKL  FN+ ++PD  L+
Sbjct: 944  LSRKYPHFMEKYVNKSYNSSSVLGEIYDRAIAYQPDNALIREIWKLQCFNV-EIPDRVLN 1002

Query: 361  LWKERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNEAL 540
            LWK RY++Y+ +M+ AL+  + SKN++A+ VI  YK+MLY A DF  +TR IE +YN+AL
Sbjct: 1003 LWKNRYDSYKYEMSTALQSGDESKNNSANIVITNYKKMLYEAEDFASSTRKIEDIYNDAL 1062

Query: 541  AIYHVSYDYAKKRNDIAKCGFAWKVAGSALCAYHRKIHCMNTGDREITF 687
            AIYHVSYD A K  D+ KCGFAWKVAG ALC++H       T  R I+F
Sbjct: 1063 AIYHVSYDNAIKCGDVRKCGFAWKVAGEALCSFHES----KTPGRSISF 1107


>ref|XP_022893344.1| probable RNA-dependent RNA polymerase 5 isoform X2 [Olea europaea
            var. sylvestris]
          Length = 896

 Score =  233 bits (593), Expect = 2e-67
 Identities = 121/230 (52%), Positives = 156/230 (67%), Gaps = 2/230 (0%)
 Frame = +1

Query: 13   TAADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPNDLKA 192
            TAADS++  MDQ L+L D D+  +K    +KI++LID+YYDALDAPKSGK + +PN LKA
Sbjct: 663  TAADSWLTNMDQLLMLSD-DSAFKKDDLRRKIIQLIDIYYDALDAPKSGKNVKVPNHLKA 721

Query: 193  TRYPHYLHRKPE--YHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSCLSLW 366
              YPHY+ R P   YHSTSILGQIYD  +  K +  P  EI KL  F++ ++P+  L++W
Sbjct: 722  KSYPHYMERGPRFTYHSTSILGQIYDRVEESKTDHFPTIEISKLPCFDV-EIPEMYLNMW 780

Query: 367  KERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNEALAI 546
            K+RY+ YR DMT AL     SKN AA  VI KYKQ+LY ASD +++ +  E +  EALAI
Sbjct: 781  KDRYDEYRMDMTRALNSRGESKNAAADEVIRKYKQLLYDASDMEESAKKTEEIEMEALAI 840

Query: 547  YHVSYDYAKKRNDIAKCGFAWKVAGSALCAYHRKIHCMNTGDREITFVSS 696
            YHV+YD+AKKRND  KC F W VAG+ALC  H +       +R I  +SS
Sbjct: 841  YHVTYDFAKKRNDPGKCKFVWNVAGAALCNLHSQ-KMAGPNERPIVILSS 889


>ref|XP_022893343.1| probable RNA-dependent RNA polymerase 5 isoform X1 [Olea europaea
            var. sylvestris]
          Length = 897

 Score =  233 bits (593), Expect = 2e-67
 Identities = 121/230 (52%), Positives = 156/230 (67%), Gaps = 2/230 (0%)
 Frame = +1

Query: 13   TAADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPNDLKA 192
            TAADS++  MDQ L+L D D+  +K    +KI++LID+YYDALDAPKSGK + +PN LKA
Sbjct: 664  TAADSWLTNMDQLLMLSD-DSAFKKDDLRRKIIQLIDIYYDALDAPKSGKNVKVPNHLKA 722

Query: 193  TRYPHYLHRKPE--YHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSCLSLW 366
              YPHY+ R P   YHSTSILGQIYD  +  K +  P  EI KL  F++ ++P+  L++W
Sbjct: 723  KSYPHYMERGPRFTYHSTSILGQIYDRVEESKTDHFPTIEISKLPCFDV-EIPEMYLNMW 781

Query: 367  KERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNEALAI 546
            K+RY+ YR DMT AL     SKN AA  VI KYKQ+LY ASD +++ +  E +  EALAI
Sbjct: 782  KDRYDEYRMDMTRALNSRGESKNAAADEVIRKYKQLLYDASDMEESAKKTEEIEMEALAI 841

Query: 547  YHVSYDYAKKRNDIAKCGFAWKVAGSALCAYHRKIHCMNTGDREITFVSS 696
            YHV+YD+AKKRND  KC F W VAG+ALC  H +       +R I  +SS
Sbjct: 842  YHVTYDFAKKRNDPGKCKFVWNVAGAALCNLHSQ-KMAGPNERPIVILSS 890


>gb|PIN13666.1| RNA-directed RNA polymerase QDE-1 [Handroanthus impetiginosus]
          Length = 1014

 Score =  234 bits (596), Expect = 2e-67
 Identities = 116/209 (55%), Positives = 155/209 (74%), Gaps = 2/209 (0%)
 Frame = +1

Query: 13   TAADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPNDLKA 192
            +AA+S++AFMD+ L L D+   +EK    KKI++LID+YYDA+DAPKSGK++  PN+LKA
Sbjct: 781  SAANSWLAFMDRLLTLGDH-RASEKNCLRKKIIQLIDIYYDAIDAPKSGKRVHFPNNLKA 839

Query: 193  TRYPHYLHRKPEY--HSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSCLSLW 366
              YPH++ R PEY  HS+SILGQIYD  +  K+E +P  EIWKL  F++   P+  +  W
Sbjct: 840  EMYPHHMERGPEYSYHSSSILGQIYDIIEGYKDEAVPKTEIWKLPCFDLP-TPEIYIDKW 898

Query: 367  KERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNEALAI 546
            K +YE YR++MT AL     SKNDAA+ VI+KYKQ+LY A + +++T++   +Y EALAI
Sbjct: 899  KTKYEDYRKEMTAALNSGHESKNDAANDVIKKYKQLLYDAPEMEESTKDTTVIYEEALAI 958

Query: 547  YHVSYDYAKKRNDIAKCGFAWKVAGSALC 633
            YHV+YDYAK  ND +KC FAWKVAGSALC
Sbjct: 959  YHVTYDYAKSANDCSKCNFAWKVAGSALC 987


>ref|XP_016454734.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3
            [Nicotiana tabacum]
          Length = 813

 Score =  231 bits (589), Expect = 3e-67
 Identities = 117/216 (54%), Positives = 154/216 (71%), Gaps = 2/216 (0%)
 Frame = +1

Query: 1    SSAGTAADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPN 180
            +S   AADS++AFMD+ L+L+D+D      +   K+L LID+YYDALDAPKSGKK+ IP+
Sbjct: 580  ASMSVAADSWLAFMDRLLMLRDDDADGMHSL-KGKMLHLIDIYYDALDAPKSGKKVSIPH 638

Query: 181  DLKATRYPHYLHRKP--EYHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSC 354
            DLKA R+PHY+ R     YHSTSILGQIYD      +E L + EI KL  F++ ++PD C
Sbjct: 639  DLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDEDLCITEISKLPCFDV-EIPDEC 697

Query: 355  LSLWKERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNE 534
             +LW+ERYE Y++DMT A+      KN A + VI+KYK++LYGA +F+ + R  E ++NE
Sbjct: 698  TTLWRERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYGAPEFEQSVRKTEDIFNE 757

Query: 535  ALAIYHVSYDYAKKRNDIAKCGFAWKVAGSALCAYH 642
            ALA+YHV+YD A+    I KCGFAWKVAGSALC  H
Sbjct: 758  ALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIH 793


>ref|XP_019078598.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3 [Vitis
            vinifera]
 ref|XP_019078599.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3 [Vitis
            vinifera]
          Length = 813

 Score =  231 bits (588), Expect = 5e-67
 Identities = 110/238 (46%), Positives = 166/238 (69%)
 Frame = +1

Query: 1    SSAGTAADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPN 180
            S+ G AAD+++ FMD+ L L+D D ++EK    +K+L+L D+YYDALDAPKSG K+ +  
Sbjct: 580  SAIGMAADNWLVFMDRLLTLRD-DCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSK 638

Query: 181  DLKATRYPHYLHRKPEYHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSCLS 360
            +LKA ++PH++ R+  YHSTSILGQIYDA +  + E    +EIW+L  FNI  VP +CL 
Sbjct: 639  ELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDAVPQACLR 698

Query: 361  LWKERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNEAL 540
             WK+RY+ YR +M  AL++   +K++ A+ VI KYKQ+LYGA++F+++ RN+E +++EAL
Sbjct: 699  SWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRNLEDIFDEAL 758

Query: 541  AIYHVSYDYAKKRNDIAKCGFAWKVAGSALCAYHRKIHCMNTGDREITFVSSAFDGVF 714
            AIYHV+Y++      ++ C F W+VAG ALC    K++ +  G++ +  V S    VF
Sbjct: 759  AIYHVTYEFVINGARVSYCNFPWRVAGRALC----KLYTVKLGEKSMVCVPSVLRQVF 812


>ref|XP_016511902.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana tabacum]
          Length = 1018

 Score =  233 bits (593), Expect = 7e-67
 Identities = 119/223 (53%), Positives = 156/223 (69%), Gaps = 2/223 (0%)
 Frame = +1

Query: 1    SSAGTAADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPN 180
            +S   AADS++AFMD+ L+L+D+D      +   KIL LID+YYDALDAPKSGKK+ IP+
Sbjct: 785  ASMSVAADSWLAFMDRLLMLRDDDVDGMHSL-KGKILHLIDIYYDALDAPKSGKKVSIPH 843

Query: 181  DLKATRYPHYLHRKP--EYHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSC 354
            DLKA R+PHY+ R     YHSTSILGQIYD      +E L + EI KL  F++ ++PD C
Sbjct: 844  DLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDEDLCITEISKLPCFDV-EIPDEC 902

Query: 355  LSLWKERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNE 534
            ++LW ERYE Y++DMT A+      KN A + VI+KYK++LYGA +F+ + R  + ++NE
Sbjct: 903  MALWGERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYGAPEFEQSARKTKDIFNE 962

Query: 535  ALAIYHVSYDYAKKRNDIAKCGFAWKVAGSALCAYHRKIHCMN 663
            ALA+YHV+YD A+    I KCGFAWKVAGSALC  H   H  N
Sbjct: 963  ALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYHKEN 1005


>ref|XP_016511895.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana tabacum]
          Length = 1020

 Score =  233 bits (593), Expect = 7e-67
 Identities = 119/223 (53%), Positives = 156/223 (69%), Gaps = 2/223 (0%)
 Frame = +1

Query: 1    SSAGTAADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPN 180
            +S   AADS++AFMD+ L+L+D+D      +   KIL LID+YYDALDAPKSGKK+ IP+
Sbjct: 787  ASMSVAADSWLAFMDRLLMLRDDDVDGMHSL-KGKILHLIDIYYDALDAPKSGKKVSIPH 845

Query: 181  DLKATRYPHYLHRKP--EYHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSC 354
            DLKA R+PHY+ R     YHSTSILGQIYD      +E L + EI KL  F++ ++PD C
Sbjct: 846  DLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDEDLCITEISKLPCFDV-EIPDEC 904

Query: 355  LSLWKERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNE 534
            ++LW ERYE Y++DMT A+      KN A + VI+KYK++LYGA +F+ + R  + ++NE
Sbjct: 905  MALWGERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYGAPEFEQSARKTKDIFNE 964

Query: 535  ALAIYHVSYDYAKKRNDIAKCGFAWKVAGSALCAYHRKIHCMN 663
            ALA+YHV+YD A+    I KCGFAWKVAGSALC  H   H  N
Sbjct: 965  ALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYHKEN 1007


>ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2 [Vitis
            vinifera]
 emb|CBI28010.3| unnamed protein product, partial [Vitis vinifera]
          Length = 929

 Score =  231 bits (588), Expect = 2e-66
 Identities = 110/238 (46%), Positives = 166/238 (69%)
 Frame = +1

Query: 1    SSAGTAADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPN 180
            S+ G AAD+++ FMD+ L L+D D ++EK    +K+L+L D+YYDALDAPKSG K+ +  
Sbjct: 696  SAIGMAADNWLVFMDRLLTLRD-DCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSK 754

Query: 181  DLKATRYPHYLHRKPEYHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSCLS 360
            +LKA ++PH++ R+  YHSTSILGQIYDA +  + E    +EIW+L  FNI  VP +CL 
Sbjct: 755  ELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDAVPQACLR 814

Query: 361  LWKERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNEAL 540
             WK+RY+ YR +M  AL++   +K++ A+ VI KYKQ+LYGA++F+++ RN+E +++EAL
Sbjct: 815  SWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRNLEDIFDEAL 874

Query: 541  AIYHVSYDYAKKRNDIAKCGFAWKVAGSALCAYHRKIHCMNTGDREITFVSSAFDGVF 714
            AIYHV+Y++      ++ C F W+VAG ALC    K++ +  G++ +  V S    VF
Sbjct: 875  AIYHVTYEFVINGARVSYCNFPWRVAGRALC----KLYTVKLGEKSMVCVPSVLRQVF 928


>ref|XP_009592437.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana tomentosiformis]
          Length = 1018

 Score =  231 bits (590), Expect = 2e-66
 Identities = 119/223 (53%), Positives = 155/223 (69%), Gaps = 2/223 (0%)
 Frame = +1

Query: 1    SSAGTAADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPN 180
            +S   AADS++AFMD  L+L+D+D      +   KIL LID+YYDALDAPKSGKK+ IP+
Sbjct: 785  ASMSVAADSWLAFMDLLLMLRDDDVDGMHSL-KGKILHLIDIYYDALDAPKSGKKVSIPH 843

Query: 181  DLKATRYPHYLHRKP--EYHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSC 354
            DLKA R+PHY+ R     YHSTSILGQIYD      +E L + EI KL  F++ ++PD C
Sbjct: 844  DLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDEDLCITEISKLPCFDV-EIPDEC 902

Query: 355  LSLWKERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNE 534
            ++LW ERYE Y++DMT A+      KN A + VI+KYK++LYGA +F+ + R  + ++NE
Sbjct: 903  MALWGERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYGAPEFEQSVRKTKDIFNE 962

Query: 535  ALAIYHVSYDYAKKRNDIAKCGFAWKVAGSALCAYHRKIHCMN 663
            ALA+YHV+YD A+    I KCGFAWKVAGSALC  H   H  N
Sbjct: 963  ALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYHKEN 1005


>ref|XP_009592436.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana tomentosiformis]
          Length = 1020

 Score =  231 bits (590), Expect = 2e-66
 Identities = 119/223 (53%), Positives = 155/223 (69%), Gaps = 2/223 (0%)
 Frame = +1

Query: 1    SSAGTAADSYMAFMDQHLILQDNDTTNEKGVFVKKILKLIDLYYDALDAPKSGKKIVIPN 180
            +S   AADS++AFMD  L+L+D+D      +   KIL LID+YYDALDAPKSGKK+ IP+
Sbjct: 787  ASMSVAADSWLAFMDLLLMLRDDDVDGMHSL-KGKILHLIDIYYDALDAPKSGKKVSIPH 845

Query: 181  DLKATRYPHYLHRKP--EYHSTSILGQIYDAFQRCKNEKLPVQEIWKLHYFNISDVPDSC 354
            DLKA R+PHY+ R     YHSTSILGQIYD      +E L + EI KL  F++ ++PD C
Sbjct: 846  DLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDEDLCITEISKLPCFDV-EIPDEC 904

Query: 355  LSLWKERYEAYRQDMTNALKYNEISKNDAASSVIEKYKQMLYGASDFKDTTRNIEHVYNE 534
            ++LW ERYE Y++DMT A+      KN A + VI+KYK++LYGA +F+ + R  + ++NE
Sbjct: 905  MALWGERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYGAPEFEQSVRKTKDIFNE 964

Query: 535  ALAIYHVSYDYAKKRNDIAKCGFAWKVAGSALCAYHRKIHCMN 663
            ALA+YHV+YD A+    I KCGFAWKVAGSALC  H   H  N
Sbjct: 965  ALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYHKEN 1007