BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00010853
         (3393 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023763421.1| RNA-dependent RNA polymerase 6 [Lactuca sati...  1842   0.0  
ref|XP_022029697.1| RNA-dependent RNA polymerase 6-like [Heliant...  1783   0.0  
gb|KVH89612.1| RNA-dependent RNA polymerase, eukaryotic-type [Cy...  1764   0.0  
ref|XP_022845194.1| RNA-dependent RNA polymerase 6 [Olea europae...  1528   0.0  
gb|PIN21599.1| RNA-directed RNA polymerase QDE-1 [Handroanthus i...  1513   0.0  
ref|XP_015885879.1| PREDICTED: RNA-dependent RNA polymerase 6 [Z...  1508   0.0  
ref|XP_011081567.1| RNA-dependent RNA polymerase 6 [Sesamum indi...  1497   0.0  
ref|XP_010648660.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...  1494   0.0  
gb|PON56884.1| RNA-dependent RNA polymerase-type [Trema orientalis]  1489   0.0  
ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1489   0.0  
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...  1486   0.0  
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...  1486   0.0  
gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]      1485   0.0  
ref|XP_017983705.1| PREDICTED: RNA-dependent RNA polymerase 6 [T...  1484   0.0  
gb|KVH99831.1| RNA-dependent RNA polymerase, eukaryotic-type [Cy...  1484   0.0  
ref|XP_012071453.1| RNA-dependent RNA polymerase 6 isoform X1 [J...  1484   0.0  
ref|XP_019260524.1| PREDICTED: RNA-dependent RNA polymerase 6 [N...  1483   0.0  
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]    1483   0.0  
ref|XP_021276585.1| RNA-dependent RNA polymerase 6 [Herrania umb...  1482   0.0  
ref|XP_021670990.1| RNA-dependent RNA polymerase 6-like [Hevea b...  1482   0.0  

>ref|XP_023763421.1| RNA-dependent RNA polymerase 6 [Lactuca sativa]
 gb|PLY85763.1| hypothetical protein LSAT_1X44761 [Lactuca sativa]
          Length = 1199

 Score = 1842 bits (4770), Expect = 0.0
 Identities = 891/1132 (78%), Positives = 995/1132 (87%), Gaps = 1/1132 (0%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYDADLDQIKKVNDYEKV 3214
            VS+GGFDN +TAK LLDY     G VWRCR+KKSSTPPDTYPE+DADL+ I+K+NDYEKV
Sbjct: 15   VSIGGFDNNITAKRLLDYIEAKAGQVWRCRLKKSSTPPDTYPEFDADLENIQKLNDYEKV 74

Query: 3213 KPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIENV 3034
            +PHAFV FV PD VN + EAE                GPENPYRMNQRR  + P ++ NV
Sbjct: 75   EPHAFVHFVDPDSVNSIKEAEGKCELVLDNNYLKVNLGPENPYRMNQRRRTKTPFKLSNV 134

Query: 3033 ILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCNF 2854
            +LE GLL+  D F+VGWRG  SG+DFL+DPFD SCKFLFTK+T FSFKGTK+HAVIKCN+
Sbjct: 135  VLEIGLLASRDKFLVGWRGPSSGLDFLIDPFDCSCKFLFTKDTAFSFKGTKDHAVIKCNY 194

Query: 2853 KVEFLVRDVNVIKEYDVKEYDDP-KVLVFQLASSPLIFYRTADDEIAITHPSQMLDDDDP 2677
            KVEFL RDVN IKEY   +Y    +VLVFQLAS+PLI YRTADD+IAITHPS+MLDDDDP
Sbjct: 195  KVEFLARDVNDIKEY--MDYSQASQVLVFQLASAPLISYRTADDDIAITHPSEMLDDDDP 252

Query: 2676 WIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRIEHVKTKLKVLEEPGF 2497
            WIRTTDFT  GAIGRCNTYRI+IRIRDVPK ++ALEFL++QRV I+H    LKV  EP F
Sbjct: 253  WIRTTDFTPGGAIGRCNTYRILIRIRDVPKVKKALEFLKEQRVHIDHPTRNLKVENEPDF 312

Query: 2496 GTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAALK 2317
            G+P++D  F I +K DI FK LFLVN+V+++CIINQHQFTE+VFDLLR   EE+ VAALK
Sbjct: 313  GSPLRDPFFCIQYKMDIPFKVLFLVNAVLNKCIINQHQFTEKVFDLLRDAKEEVTVAALK 372

Query: 2316 HIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPPEV 2137
            HI SY R  + +GFT +++VQ+W +NNPKL+++   Q D+IEVRRLIITP+K YCLPPEV
Sbjct: 373  HICSY-RRPVYDGFTRVKIVQEWLMNNPKLIDEEGGQKDIIEVRRLIITPSKAYCLPPEV 431

Query: 2136 ELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMFRR 1957
            ELSNRVLRHYR+VSDRFLRVTFMDEGM TLNNHVL+FYPAPIVKDITSSFIAQKTTMFRR
Sbjct: 432  ELSNRVLRHYRDVSDRFLRVTFMDEGMRTLNNHVLNFYPAPIVKDITSSFIAQKTTMFRR 491

Query: 1956 VKHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIAKC 1777
            VK+ILSQG Y+CGR+Y FLAFSANQLRDRSAWFFAE +K+TCK I+SWMGKFNNKN+AKC
Sbjct: 492  VKNILSQGFYLCGRKYSFLAFSANQLRDRSAWFFAEKDKLTCKDIISWMGKFNNKNVAKC 551

Query: 1776 AARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLTEN 1597
            AARMGQCFSSTYATVEVPR+EVDL+LEDI RN Y FSDG+GK+SPELALEVAEKLQL +N
Sbjct: 552  AARMGQCFSSTYATVEVPRHEVDLELEDIKRNGYTFSDGVGKISPELALEVAEKLQLKDN 611

Query: 1596 QPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFLNR 1417
            QPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFES+HT+LEICSWTRLQPGFLNR
Sbjct: 612  QPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESDHTVLEICSWTRLQPGFLNR 671

Query: 1416 QIITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAAGF 1237
            QIITLLSAL V+D+IFW+MQMKMV  LN ML DTDVAFDV+TASCAESGNTASIML AGF
Sbjct: 672  QIITLLSALNVEDDIFWNMQMKMVKKLNLMLTDTDVAFDVLTASCAESGNTASIMLGAGF 731

Query: 1236 KPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVLEQGQCFIQVSKPS 1057
            KP +EPHLRGMLSSIRVAQL+DLREKSRIFVQDGRWLMGCLDEL VLEQGQCFIQVS PS
Sbjct: 732  KPQSEPHLRGMLSSIRVAQLEDLREKSRIFVQDGRWLMGCLDELGVLEQGQCFIQVSNPS 791

Query: 1056 IENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDCLVFP 877
            +ENCFAKHGSRF  T RNL VIEG VV+AKNPCLHPGDVRVLKAVNVPGLEHL DCLVFP
Sbjct: 792  VENCFAKHGSRFCDTDRNLKVIEGNVVIAKNPCLHPGDVRVLKAVNVPGLEHLFDCLVFP 851

Query: 876  QKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRHSDII 697
            QKGDRPHTDEASGSDLDGDLYFVTWDE LIPPSK SW PMEYTAAEAK+LPRDV+HSDII
Sbjct: 852  QKGDRPHTDEASGSDLDGDLYFVTWDEMLIPPSKTSWPPMEYTAAEAKQLPRDVKHSDII 911

Query: 696  DFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVNMPRN 517
            +FFTKNMVND LGTICNAHVVHADMSD GALDEKC+KLAELAA AVDFPKTGKIV+MP  
Sbjct: 912  EFFTKNMVNDSLGTICNAHVVHADMSDYGALDEKCVKLAELAATAVDFPKTGKIVSMPPQ 971

Query: 516  LRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSSELHIDPLLVPYDKDLVV 337
            LRPKLYPD+MGKE FQSYKS KILG+LYRQI+D +N D+ PSSELHI P  VPYDKDL +
Sbjct: 972  LRPKLYPDYMGKESFQSYKSKKILGKLYRQIKDVYNDDVMPSSELHILPTHVPYDKDLEI 1031

Query: 336  NETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMKERIE 157
             E ++F+ +AW  KLSYDRQLNGLLGQY+V+REEEIVTGHIWSMPKHS+KKQ EMKERI+
Sbjct: 1032 LEASNFIKEAWGSKLSYDRQLNGLLGQYKVAREEEIVTGHIWSMPKHSSKKQGEMKERIK 1091

Query: 156  HAYSALRKEFRKVFDHLGAEFDQMSEEEKNVIYEKKASAWYQVTYHPVWVEK 1
            HAYSALRK+FRKVFDHLG EFDQ+ EEE+NV++E+KASAWYQVTYHP WV++
Sbjct: 1092 HAYSALRKDFRKVFDHLGPEFDQLPEEERNVMFERKASAWYQVTYHPDWVKE 1143


>ref|XP_022029697.1| RNA-dependent RNA polymerase 6-like [Helianthus annuus]
 gb|OTG32623.1| putative RNA-dependent RNA polymerase 6 [Helianthus annuus]
          Length = 1201

 Score = 1783 bits (4618), Expect = 0.0
 Identities = 875/1134 (77%), Positives = 983/1134 (86%), Gaps = 3/1134 (0%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYDADLDQIKKVNDYEKV 3214
            VS+GGF NEVTAK LLDY     G ++RCR+KKSSTPP+TYPE++ADLDQIK V DYEKV
Sbjct: 15   VSIGGFGNEVTAKMLLDYLESTHGQIYRCRLKKSSTPPETYPEFNADLDQIKIVTDYEKV 74

Query: 3213 KPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIENV 3034
            +PHAFV FV P+ V  VLEA                 GPENPYRMNQRR ++   ++ NV
Sbjct: 75   EPHAFVHFVDPNSVTSVLEAAGRKELVLDKHVLKVSLGPENPYRMNQRRRKKTSFKLSNV 134

Query: 3033 ILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCNF 2854
            +LE GL++  D+FVVGWRG  SGVDFL+DPFD SCKFL TK+T F FKGTK+HAVI+CN+
Sbjct: 135  VLEIGLMTSRDDFVVGWRGPDSGVDFLIDPFDRSCKFLLTKDTAFCFKGTKDHAVIRCNY 194

Query: 2853 KVEFLVRDVNVIKEYDVKEYDDP-KVLVFQLASSPLIFYRTADDEIAITHPSQMLDDDDP 2677
            KVEFLVRDVN IKEY   +Y +   VLVFQLASSPLI YRTADD+I  T+P +MLDDDDP
Sbjct: 195  KVEFLVRDVNDIKEYT--DYSESCLVLVFQLASSPLISYRTADDDIINTYPFEMLDDDDP 252

Query: 2676 WIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRIEHVKTKLKVLEEPGF 2497
            WIRTTDFT SGAIGRCNTYR+MIRIRD  K ++ALEFL++QRV +EH KTKLK   EP F
Sbjct: 253  WIRTTDFTPSGAIGRCNTYRVMIRIRDGSKVKKALEFLKEQRVHVEHRKTKLKAENEPEF 312

Query: 2496 GTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAALK 2317
            G P+ D  FSIH+K DI+FK +FLVNSV+HRCIINQHQFTE VFDLLR Q EE+NVAALK
Sbjct: 313  GFPIPDPFFSIHYKPDISFKVMFLVNSVLHRCIINQHQFTENVFDLLRDQSEEVNVAALK 372

Query: 2316 HIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPPEV 2137
            HI +Y RH L +GF  L+ VQ+W LN PK +EKPLEQNDVIEV RLIITPTK Y LPPEV
Sbjct: 373  HICAY-RHPLYDGFKRLKTVQEWLLNTPKRIEKPLEQNDVIEVGRLIITPTKAYALPPEV 431

Query: 2136 ELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMFRR 1957
            ELSNRVLRHYR+VSDRFLRVTFMDEGM TLNN+VL+FYPAPIVKD+TS+F+AQKTTMFRR
Sbjct: 432  ELSNRVLRHYRQVSDRFLRVTFMDEGMRTLNNNVLNFYPAPIVKDVTSTFMAQKTTMFRR 491

Query: 1956 VKHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIAKC 1777
            VK ILS G ++ GR+Y FLAFSANQLRDRSAWFFAE+ KI+CK I++WMG+FNNKNIAKC
Sbjct: 492  VKDILSNGFHLSGRQYCFLAFSANQLRDRSAWFFAENGKISCKNIIAWMGRFNNKNIAKC 551

Query: 1776 AARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLTEN 1597
            AARMGQCFSSTYATV+VPR+EV++KLEDI RN+Y FSDGIG++SPELALEVAEKLQLT+N
Sbjct: 552  AARMGQCFSSTYATVDVPRHEVNMKLEDIKRNNYTFSDGIGRISPELALEVAEKLQLTDN 611

Query: 1596 QPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFLNR 1417
            QPCAYQIRYAGCKGVV  WP+K+G+N KLSLR SMNKFES+HT+LEICSWTRLQPGFLNR
Sbjct: 612  QPCAYQIRYAGCKGVVACWPNKEGENFKLSLRRSMNKFESDHTVLEICSWTRLQPGFLNR 671

Query: 1416 QIITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAAGF 1237
            QIITLLSAL+VKDEIFWDMQMKMV  LN ML +T+VAFDVITASCAESGNTASIML +GF
Sbjct: 672  QIITLLSALDVKDEIFWDMQMKMVEKLNLMLENTEVAFDVITASCAESGNTASIMLGSGF 731

Query: 1236 KPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVLEQGQCFIQVSKPS 1057
             P TEPHLRGMLSSIRVAQL+DLREKSRIFV DGRWLMGC DEL VLEQGQCFIQVS PS
Sbjct: 732  DPKTEPHLRGMLSSIRVAQLEDLREKSRIFVNDGRWLMGCFDELGVLEQGQCFIQVSNPS 791

Query: 1056 IENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDCLVFP 877
            +ENCFAKHGSRF  T  NLTVIEG V++AKNPCLHPGDVRVLKAVNVPGLEHL DCL+FP
Sbjct: 792  VENCFAKHGSRFSETTSNLTVIEGTVIIAKNPCLHPGDVRVLKAVNVPGLEHLFDCLIFP 851

Query: 876  QKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRHSDII 697
            QKGDRPHTDEASGSDLDGDLYFVTWDE+LIPPSK+SW PMEYTAAEAKEL RDVR +DI+
Sbjct: 852  QKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKRSWPPMEYTAAEAKELTRDVRTADIV 911

Query: 696  DFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVNMPRN 517
            DFFTKNMVND LGTICNAHVVHAD+SD GALDEKC+KLAELAA AVDFPKTGKIVNMP  
Sbjct: 912  DFFTKNMVNDSLGTICNAHVVHADLSDDGALDEKCLKLAELAATAVDFPKTGKIVNMPAQ 971

Query: 516  LRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTD-ITPSSELHIDPLLVPYDKDLV 340
            L+PK YPDFMGKE+FQSYKS KILG+LYRQI+D +N+D  TP SEL I P  +PYD+DL 
Sbjct: 972  LKPKQYPDFMGKENFQSYKSEKILGKLYRQIKDFYNSDNNTPCSELEILPSGIPYDEDLE 1031

Query: 339  VNETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMKERI 160
            V ++A F+NDAW CKL YD QLNGLLGQY+VSREEEIVTGHIWSMPKH +KKQ EMK+RI
Sbjct: 1032 VPDSASFLNDAWDCKLKYDLQLNGLLGQYKVSREEEIVTGHIWSMPKHGSKKQGEMKDRI 1091

Query: 159  EHAYSALRKEFRKVFDHLGAEFDQMS-EEEKNVIYEKKASAWYQVTYHPVWVEK 1
            +HAYSALRKEFRKVFD LG +FDQ+S EEE+N ++EKKASAWYQVTYHP+WV+K
Sbjct: 1092 KHAYSALRKEFRKVFDQLGVDFDQISEEEERNAVFEKKASAWYQVTYHPIWVKK 1145


>gb|KVH89612.1| RNA-dependent RNA polymerase, eukaryotic-type [Cynara cardunculus
            var. scolymus]
          Length = 1182

 Score = 1764 bits (4569), Expect = 0.0
 Identities = 868/1131 (76%), Positives = 970/1131 (85%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYDADLDQIKKVNDYEKV 3214
            VSVGGF + V AK LLDY  E  G VWRCRVK SSTPP+TYPE+DADL+ I+KV+DY+KV
Sbjct: 15   VSVGGFGDHVKAKMLLDYLEEIVGQVWRCRVKASSTPPNTYPEFDADLENIQKVDDYKKV 74

Query: 3213 KPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIENV 3034
            +PHAFV FV PD VN VLE E                GPENPYR          I++ NV
Sbjct: 75   EPHAFVHFVDPDSVNSVLEIEGKGELVFLNNPSKVSLGPENPYR----------IKLSNV 124

Query: 3033 ILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCNF 2854
            +LE G+ +  DNF+VGWRG  SG+DFL+DPFDYSCKFLFTK+T FSFKGTKNHAVIKCNF
Sbjct: 125  VLEIGMFASRDNFLVGWRGPDSGLDFLIDPFDYSCKFLFTKDTAFSFKGTKNHAVIKCNF 184

Query: 2853 KVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIAITHPSQMLDDDDPW 2674
            KVEFLVR++N IK+          VLVFQL S+PLI YRTADD+IAITHP++MLDDDDPW
Sbjct: 185  KVEFLVREINDIKDC----LQSHMVLVFQLVSAPLISYRTADDDIAITHPAEMLDDDDPW 240

Query: 2673 IRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRIEHVKTKLKVLEEPGFG 2494
            IRTTDFT SGAIGRC+TYR++IRIRDVPKA++AL+FL  Q V I+  +TKLKV  EP FG
Sbjct: 241  IRTTDFTPSGAIGRCHTYRVLIRIRDVPKAKKALDFLRGQSVPIDQFRTKLKVQNEPEFG 300

Query: 2493 TPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAALKH 2314
             P++D  F I ++DDI+FK LFLVN+V+HR IINQHQF+E+VFDLLR Q EE+NVAALKH
Sbjct: 301  IPLRDPFFCIQYEDDISFKVLFLVNAVLHRGIINQHQFSEKVFDLLRDQSEEVNVAALKH 360

Query: 2313 IYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPPEVE 2134
            I SY RH L +GFT L++VQ+W LNNPKL+EK + Q D+ EVRRL+ITP+K YCLPPEVE
Sbjct: 361  ICSY-RHPLYDGFTRLKIVQEWLLNNPKLIEKQIXQKDITEVRRLVITPSKAYCLPPEVE 419

Query: 2133 LSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMFRRV 1954
            LSNRVLRHYREVSDRFLRVTFMDEGM TLNNHVL+FYPA IVK      IAQKTTMFR+V
Sbjct: 420  LSNRVLRHYREVSDRFLRVTFMDEGMXTLNNHVLNFYPALIVK----GSIAQKTTMFRKV 475

Query: 1953 KHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIAKCA 1774
            K+ILS+G Y+CGRRY FLAFSANQLRDRSAWFFAE+ KI+C  I +WMGKF+N+N+AKCA
Sbjct: 476  KNILSEGFYLCGRRYRFLAFSANQLRDRSAWFFAENGKISCTDITAWMGKFSNRNVAKCA 535

Query: 1773 ARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLTENQ 1594
            ARMGQCFSSTYATV+VPR EVDL LEDI RN YVFSDGIGKMSPELALEVAEKLQL +NQ
Sbjct: 536  ARMGQCFSSTYATVKVPRAEVDLNLEDIKRNGYVFSDGIGKMSPELALEVAEKLQLKDNQ 595

Query: 1593 PCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFLNRQ 1414
            PCAYQIRYAGCKGV+VWWP KKGDNIKLSLRPSMNKFES+HT+LEICSWTRLQPGFLNRQ
Sbjct: 596  PCAYQIRYAGCKGVIVWWPGKKGDNIKLSLRPSMNKFESDHTVLEICSWTRLQPGFLNRQ 655

Query: 1413 IITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAAGFK 1234
            IITLLSAL V D IFW MQ KMV NLNQML DTD+AFDVIT SCAESG+TASIMLAAGFK
Sbjct: 656  IITLLSALNVGDNIFWKMQTKMVRNLNQMLEDTDMAFDVITTSCAESGSTASIMLAAGFK 715

Query: 1233 PHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVLEQGQCFIQVSKPSI 1054
            P TEPHL GMLSSIRVAQLKDLREKSRIFV  GR LMGCLDEL VLEQGQC+IQVS PS+
Sbjct: 716  PTTEPHLHGMLSSIRVAQLKDLREKSRIFVPKGRLLMGCLDELGVLEQGQCYIQVSNPSV 775

Query: 1053 ENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDCLVFPQ 874
            ENCF KHGSRF  TKRNLTVI+G VV+AKNPCLHPGDVRVL+AV+VPGLEHL DCL+FPQ
Sbjct: 776  ENCFVKHGSRFSETKRNLTVIKGTVVIAKNPCLHPGDVRVLEAVDVPGLEHLFDCLIFPQ 835

Query: 873  KGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRHSDIID 694
            KGDRPHTDEASGSDLDGDLYFVTWD++LIPPSKQSW PMEYTAAEAK LPRDV+HSDIID
Sbjct: 836  KGDRPHTDEASGSDLDGDLYFVTWDKNLIPPSKQSWPPMEYTAAEAKLLPRDVKHSDIID 895

Query: 693  FFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVNMPRNL 514
            FFTKNMVNDRLGTICNA+VVHADMSD GAL++ CIKLAELAAIAVDFPKTGKIVNMP  L
Sbjct: 896  FFTKNMVNDRLGTICNAYVVHADMSDYGALEKNCIKLAELAAIAVDFPKTGKIVNMPPAL 955

Query: 513  RPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSSELHIDPLLVPYDKDLVVN 334
            RPKLYPDFMGKE FQSYKS KILG+LY  ++DC  TD+TPSSEL I P  + YD+DL V 
Sbjct: 956  RPKLYPDFMGKESFQSYKSKKILGKLYHHVKDCSATDVTPSSELGILPSHIHYDEDLEVR 1015

Query: 333  ETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMKERIEH 154
            E A FVNDAW CKLSYDRQLNGLLGQY+V+REEEIVTGHIWSM KH++KKQ E+KERI+H
Sbjct: 1016 EAASFVNDAWGCKLSYDRQLNGLLGQYKVAREEEIVTGHIWSMSKHTSKKQGELKERIKH 1075

Query: 153  AYSALRKEFRKVFDHLGAEFDQMSEEEKNVIYEKKASAWYQVTYHPVWVEK 1
            AYSALRKEFRKVFD+LG +FDQ+ EEE+N  YE+KASAWYQVTYHP+WV++
Sbjct: 1076 AYSALRKEFRKVFDYLGPDFDQIPEEERNERYERKASAWYQVTYHPIWVKQ 1126


>ref|XP_022845194.1| RNA-dependent RNA polymerase 6 [Olea europaea var. sylvestris]
 ref|XP_022845195.1| RNA-dependent RNA polymerase 6 [Olea europaea var. sylvestris]
 ref|XP_022845196.1| RNA-dependent RNA polymerase 6 [Olea europaea var. sylvestris]
 ref|XP_022845198.1| RNA-dependent RNA polymerase 6 [Olea europaea var. sylvestris]
          Length = 1195

 Score = 1528 bits (3957), Expect = 0.0
 Identities = 729/1132 (64%), Positives = 904/1132 (79%), Gaps = 1/1132 (0%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYDADLDQIKKVNDYEKV 3214
            + VGGF++ VTAK L+DYF +N G+VWRCR+K SSTPP++YP Y+ D + +++ +DYEKV
Sbjct: 15   IGVGGFEDFVTAKMLMDYFEDNIGLVWRCRLKTSSTPPESYPSYEVDTESVQRKHDYEKV 74

Query: 3213 KPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIENV 3034
            KPHAFV F +       L+A                 GPENP+RMN+RR    PI++ NV
Sbjct: 75   KPHAFVHFALSSSAMSALDAAGRNELILGKNLLKVSLGPENPHRMNERRRTIPPIKLSNV 134

Query: 3033 ILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCNF 2854
             +E GL+   D+F+VGWRG + GVDFLVDPF+ +CK LFTKET FSFKG   + VIKCNF
Sbjct: 135  CVEIGLMRGQDDFLVGWRGPRDGVDFLVDPFNATCKLLFTKETVFSFKGESKNTVIKCNF 194

Query: 2853 KVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIAITHPSQMLDDDDPW 2674
            KVEFL R++N IK Y  +++    +++ QLASSP+++YRTADD+I  + P  +LDDDDPW
Sbjct: 195  KVEFLPREINEIKRY--RDFSS-LIILLQLASSPIVYYRTADDDIEESVPFDLLDDDDPW 251

Query: 2673 IRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRIEHVKTKLKVLEEPGFG 2494
            IRTTDFT SGAIGRCN YRI +R R+ P+ ++AL +L++ R+ + +   + +V +EP FG
Sbjct: 252  IRTTDFTPSGAIGRCNIYRISVRPRNGPRFDKALAYLQEHRIPVLNDSPEPRVRDEPDFG 311

Query: 2493 TPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAALKH 2314
             P+ D  F I +K+ I FK LFLVN++MH+ IINQHQ +++ F LLR +PE +N+ ALKH
Sbjct: 312  VPLPDPFFCIQYKEGITFKVLFLVNAIMHKGIINQHQMSDKFFHLLRIRPERVNLVALKH 371

Query: 2313 IYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPPEVE 2134
            I+S   HT  +   +L  VQKW L NPKLLE P E +D++EVRRLIITP K YCLPPEVE
Sbjct: 372  IWSLKHHTWYDACKNLVFVQKWLLKNPKLLEGPQELDDIVEVRRLIITPAKAYCLPPEVE 431

Query: 2133 LSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMFRRV 1954
            LSNRVLR+Y+ V+DRFLRVTFMDEGM  LN +VL++YP+ I++DITS    Q+T+MF+RV
Sbjct: 432  LSNRVLRNYKNVADRFLRVTFMDEGMRKLNKNVLTYYPSGILRDITSDSNPQRTSMFKRV 491

Query: 1953 KHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIAKCA 1774
            K ILS G Y+CGRRY FLA+SANQLRD SAWFFAE+E +    I+SWMG+F N+N+AKCA
Sbjct: 492  KDILSNGFYLCGRRYSFLAYSANQLRDSSAWFFAENETVVVPSIMSWMGRFTNRNVAKCA 551

Query: 1773 ARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLTENQ 1594
            ARMGQCFSSTYATVEVP  EVD +L DI RN Y FSDGIGK+SP+LA+ VAEKLQLT N 
Sbjct: 552  ARMGQCFSSTYATVEVPAAEVDPELPDIQRNGYDFSDGIGKISPDLAMRVAEKLQLTVNP 611

Query: 1593 PCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFLNRQ 1414
            PCAYQIRYAGCKGVV  WP  + + I L LRPSM KFES HTILEICSWTR QPGFLNRQ
Sbjct: 612  PCAYQIRYAGCKGVVACWP-AENNGIHLYLRPSMKKFESNHTILEICSWTRFQPGFLNRQ 670

Query: 1413 IITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAAGFK 1234
            IITLLSAL+VKD+IFW MQ  MV  L++ML DTD AFD++TASCAE GNTA+IML+AGF+
Sbjct: 671  IITLLSALDVKDDIFWKMQEIMVSRLDRMLVDTDTAFDILTASCAEQGNTAAIMLSAGFR 730

Query: 1233 PHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVLEQGQCFIQVSKPSI 1054
            P +EPHL GML+SIR AQL DLRE++RIFV  GRWLMGCLDEL +L QGQCFIQVS PS+
Sbjct: 731  PQSEPHLCGMLTSIRAAQLGDLRERARIFVPSGRWLMGCLDELGILRQGQCFIQVSNPSL 790

Query: 1053 ENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDCLVFPQ 874
            E+CF KHGS+F  T +NL VI+G V +AKNPCLHPGDVR+L+AV++PGL+HL DCLVFPQ
Sbjct: 791  EDCFVKHGSKFSETNKNLRVIKGLVAIAKNPCLHPGDVRILEAVDIPGLKHLYDCLVFPQ 850

Query: 873  KGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRHSDIID 694
             GDRPHT+EASGSDLDGDLYFVTWDE+LIPPSK+SW+PMEY+  E K LPRDV+H DIID
Sbjct: 851  NGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMEYSTGEVKTLPRDVKHKDIID 910

Query: 693  FFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVNMPRNL 514
            FF+KNMVN+ LG ICNAHVVHAD+S+ GALD KCI+LAELAA AVDFPKTGKIV MP  L
Sbjct: 911  FFSKNMVNESLGAICNAHVVHADLSESGALDLKCIRLAELAATAVDFPKTGKIVTMPTVL 970

Query: 513  RPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSSELHIDPLLVPYDKDLVVN 334
            +PKLYPDFMGKE+FQSY+S+KILG+LYR+I+D ++ D   SS L      +PYD+DL + 
Sbjct: 971  KPKLYPDFMGKEEFQSYRSSKILGKLYRKIKDAYDEDYEGSSGLAFASKEIPYDQDLEIP 1030

Query: 333  ETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMKERIEH 154
             +  F  DAW+CK +YD QL+ LLGQY+V+REEE+VTGHIWSMPK+S+KKQ E+KER++H
Sbjct: 1031 GSESFFADAWNCKCAYDGQLSCLLGQYKVNREEEVVTGHIWSMPKYSSKKQGELKERLKH 1090

Query: 153  AYSALRKEFRKVFDHLG-AEFDQMSEEEKNVIYEKKASAWYQVTYHPVWVEK 1
            AY++L+K+FRK+FD +  ++F+ +S++EKNVIYE+KASAWYQVTYHP WV+K
Sbjct: 1091 AYNSLKKDFRKIFDSMNDSDFNDLSDDEKNVIYERKASAWYQVTYHPKWVQK 1142


>gb|PIN21599.1| RNA-directed RNA polymerase QDE-1 [Handroanthus impetiginosus]
          Length = 1204

 Score = 1513 bits (3916), Expect = 0.0
 Identities = 730/1133 (64%), Positives = 897/1133 (79%), Gaps = 2/1133 (0%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYDADLDQIKKVNDYEKV 3214
            +SVGG +  VTAK LLDYF +N G+VWRCR+K SSTPPD+YP Y+ D +++++ N+Y KV
Sbjct: 22   ISVGGLEKFVTAKMLLDYFEDNVGLVWRCRLKTSSTPPDSYPNYEIDTERVQRKNEYVKV 81

Query: 3213 KPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIENV 3034
            +PHAFV F V    N  LEA                 GP+NP+R+N+RR    P ++ +V
Sbjct: 82   EPHAFVHFAVAGSANSALEAA-GRGDLILGRPLKVSLGPQNPHRLNERRRTTTPYKLSDV 140

Query: 3033 ILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCNF 2854
             +E G++  PD F+VGW G + GVDFLVDPF+ +CK  FTK+T FSFKG    AVI CNF
Sbjct: 141  FVEIGVMRSPDEFIVGWSGPRRGVDFLVDPFNGTCKLHFTKDTAFSFKGEARPAVINCNF 200

Query: 2853 KVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIAITHPSQMLDDDDPW 2674
             +EFL R++N IK Y  K++    V+V QLASSPL++YRTADD+I  + P  +LDDDDPW
Sbjct: 201  MIEFLPREINEIKHY--KDFTSLVVIV-QLASSPLVYYRTADDDIEESVPFDLLDDDDPW 257

Query: 2673 IRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRIEH--VKTKLKVLEEPG 2500
            IRTTDFT SGAIGRCNTYRI +R R+     +AL +L  +RV +     + +L+V +EP 
Sbjct: 258  IRTTDFTPSGAIGRCNTYRISVRPRNGSHLSKALGYLRNRRVTVLDGCPRQQLQVRDEPD 317

Query: 2499 FGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAAL 2320
            FG PM D  F I +K+ I+FK +FLVN+VMH+ IINQHQ +E+ FDLLR QPEE+   AL
Sbjct: 318  FGMPMSDPFFCIQYKEGISFKIMFLVNAVMHKGIINQHQMSEKFFDLLRSQPEELTTVAL 377

Query: 2319 KHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPPE 2140
            K +YS+ +H + + F +L+ +Q+W LNNPK+LE+P E +D++EVRRLIITP K YCLPPE
Sbjct: 378  KRMYSF-KHPVDDAFKALKNLQQWLLNNPKILERPREMDDIVEVRRLIITPAKAYCLPPE 436

Query: 2139 VELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMFR 1960
            VELSNRVLR+YR ++DRFLRVTFMDE M+TLN +VL+++  PIV+DITS+   Q+TTMF+
Sbjct: 437  VELSNRVLRNYRNIADRFLRVTFMDEAMQTLNKNVLTYFVTPIVRDITSNSGPQRTTMFK 496

Query: 1959 RVKHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIAK 1780
            RVK IL+ G Y+CGR+Y FLAFSANQLRDRSAWFFAED+ I    I SWMGKF N+N+AK
Sbjct: 497  RVKDILTNGFYLCGRKYSFLAFSANQLRDRSAWFFAEDKNIGVATIKSWMGKFTNRNVAK 556

Query: 1779 CAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLTE 1600
            CAARMGQCFSSTYATVEVP  EV+ KL DI RNDYVFSDGIG +S +LA+EVAEKLQL+ 
Sbjct: 557  CAARMGQCFSSTYATVEVPSTEVNSKLPDIERNDYVFSDGIGMISADLAMEVAEKLQLST 616

Query: 1599 NQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFLN 1420
              PCAYQIRYAG KGVV  WP  K D  +L LRPSM KFES HTILEICSWTR QPGFLN
Sbjct: 617  KPPCAYQIRYAGYKGVVAGWP-AKNDGFRLYLRPSMKKFESNHTILEICSWTRFQPGFLN 675

Query: 1419 RQIITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAAG 1240
            RQIITLLSAL+V+D+IFW MQ  MV  L+QML DTD+AFDV+TASC + GNTA+IML+AG
Sbjct: 676  RQIITLLSALDVQDDIFWRMQETMVSRLDQMLEDTDMAFDVLTASCTDQGNTAAIMLSAG 735

Query: 1239 FKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVLEQGQCFIQVSKP 1060
            FKP TEPHLRGML+SIR AQL DLREK+RIFV +GRWLMGCLDEL VLE GQCFIQVS P
Sbjct: 736  FKPQTEPHLRGMLTSIRAAQLADLREKARIFVPNGRWLMGCLDELGVLESGQCFIQVSNP 795

Query: 1059 SIENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDCLVF 880
            S+E+CF KHGS F  +++ L VI+G V +AKNPCLHPGDVR+L+AV+VPGL HL DCL+F
Sbjct: 796  SLEDCFVKHGSHFSESEKRLQVIKGLVAIAKNPCLHPGDVRILEAVDVPGLHHLYDCLIF 855

Query: 879  PQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRHSDI 700
            PQKG+RPHT+EASGSDLDGDLYFVTWDE+L+PPSK+SW PMEY   E K+LPR+V+HSDI
Sbjct: 856  PQKGERPHTNEASGSDLDGDLYFVTWDENLLPPSKRSWTPMEYAPGEIKQLPREVKHSDI 915

Query: 699  IDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVNMPR 520
            I+FF KNMVN+ LG ICNAHVVHAD+S+ GALDEKCIKLAELAA AVDFPKTGKIV+MP 
Sbjct: 916  IEFFAKNMVNESLGAICNAHVVHADLSEYGALDEKCIKLAELAATAVDFPKTGKIVSMPA 975

Query: 519  NLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSSELHIDPLLVPYDKDLV 340
            +L+PK+YPDFMGKE+FQ+Y S+KILG+LYR++ D ++ D   SS+         YD DL 
Sbjct: 976  DLKPKMYPDFMGKEEFQTYNSSKILGKLYRKVRDAYDKDYEASSQHAFAWESSTYDGDLE 1035

Query: 339  VNETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMKERI 160
            +  +  F+ DAW CK SYD QL GLLGQY+V+REEE+VTGHIWSMPK+ +KKQ E+KER+
Sbjct: 1036 IPGSTSFITDAWDCKCSYDGQLIGLLGQYKVNREEEVVTGHIWSMPKYKSKKQGELKERL 1095

Query: 159  EHAYSALRKEFRKVFDHLGAEFDQMSEEEKNVIYEKKASAWYQVTYHPVWVEK 1
            +HAYS LRK+FRKVF+ +  EFDQ+S++EKN++YE+KASAWY VTYH  +V+K
Sbjct: 1096 KHAYSTLRKDFRKVFECMDPEFDQLSDDEKNILYERKASAWYHVTYHESYVKK 1148


>ref|XP_015885879.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
 ref|XP_015885880.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
 ref|XP_015885881.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
 ref|XP_015885882.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
 ref|XP_015885883.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
          Length = 1197

 Score = 1508 bits (3903), Expect = 0.0
 Identities = 718/1131 (63%), Positives = 902/1131 (79%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYDADLDQIKKVNDYEKV 3214
            VS+GGFD  V AK+L D+  +  G+V+RCR+K SSTPP++YP+Y  D   I++ +DY+KV
Sbjct: 15   VSLGGFDRHVRAKDLSDFLEDEIGLVYRCRLKTSSTPPESYPDYTIDTAAIERKDDYKKV 74

Query: 3213 KPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIENV 3034
            +PHAFV F + +    +L+A                 GPENPYR+NQRR    PI++ +V
Sbjct: 75   EPHAFVHFALAESAKWILDAAGRCELILNDRPLKVSLGPENPYRLNQRRRTTTPIKLSDV 134

Query: 3033 ILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCNF 2854
            +++ G L   D F + WRG   GVDFLVDPFD +CKF FT++T FSFKG+ NHAVIKC+F
Sbjct: 135  VVDIGTLVTRDQFFIAWRGPPYGVDFLVDPFDGTCKFCFTRDTAFSFKGSLNHAVIKCDF 194

Query: 2853 KVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIAITHPSQMLDDDDPW 2674
            K+EFLVRD+N  K+Y    Y    VL+ QL S+P I+YRTADD+I  + P  MLDDDDPW
Sbjct: 195  KMEFLVRDINEFKQYTDTSY---LVLLLQLNSAPRIWYRTADDDIDDSVPYDMLDDDDPW 251

Query: 2673 IRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRIEHVKTKLKVLEEPGFG 2494
            IRTTDFT SGAIGR N+YRI +  R   K ++A+ +L ++RV  + ++  L++ +EP F 
Sbjct: 252  IRTTDFTPSGAIGRSNSYRISVPPRHGAKLKKAISYLRERRVHHDSLRWPLRIQKEPDFD 311

Query: 2493 TPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAALKH 2314
             PM D  F IH+K+DI+F+T+FLVN+V+H+ I NQHQ ++  F+LLR Q +E+NVAALKH
Sbjct: 312  MPMSDPFFCIHYKEDIDFETMFLVNAVIHKGIFNQHQISDGFFNLLRNQMKEVNVAALKH 371

Query: 2313 IYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPPEVE 2134
            I SY R    +    L+VVQ+W L +PKL +KP   +D+ EVRRL+ITPT+ YCLPPEVE
Sbjct: 372  ISSYKRPVF-DACRRLKVVQEWLLRDPKLFKKPKRLDDIAEVRRLVITPTRAYCLPPEVE 430

Query: 2133 LSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMFRRV 1954
            LSNRVLR+Y+EV+DRFLRVTFMDEGM+T+N++VL+++ A IV++ITS+   QKT +F+R+
Sbjct: 431  LSNRVLRNYKEVADRFLRVTFMDEGMQTINSNVLTYHVASIVREITSNSFPQKTKVFQRI 490

Query: 1953 KHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIAKCA 1774
            K IL+ G Y+CGR+Y FLAFS+NQLRDRSAWFFAED+ I   ++ SWMG+F N+N+AKCA
Sbjct: 491  KSILTNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNINVFEVKSWMGRFTNRNVAKCA 550

Query: 1773 ARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLTENQ 1594
            ARMG CFSSTYA+VEVP  +V+    DI RN Y FSDGIGK++P+LALEVA+KL+L  N 
Sbjct: 551  ARMGLCFSSTYASVEVPSTQVNRGFPDIKRNGYTFSDGIGKITPDLALEVAQKLKLERNP 610

Query: 1593 PCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFLNRQ 1414
            PCAYQIRYAG KGVV  W     D  +LSLRPSM+KF+S HTILEICSWTR QPGFLNRQ
Sbjct: 611  PCAYQIRYAGFKGVVACWKPTDDDGARLSLRPSMDKFQSNHTILEICSWTRFQPGFLNRQ 670

Query: 1413 IITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAAGFK 1234
            I+TLLSAL V DEIFW+MQ  M+  LNQML DTD+AFDV+TASCAE GN A+IML+AGF 
Sbjct: 671  IVTLLSALNVSDEIFWNMQETMIFKLNQMLIDTDIAFDVLTASCAEQGNVAAIMLSAGFS 730

Query: 1233 PHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVLEQGQCFIQVSKPSI 1054
            P  EPHLRGML+ IR AQL  LREK+RIFV  GRWLMGCLDEL VLEQGQCFIQVS PS+
Sbjct: 731  PQKEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQGQCFIQVSNPSL 790

Query: 1053 ENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDCLVFPQ 874
            ENCF+KHGSRF     NL VI+G+VV+AKNPCLHPGDVR+L+AV+VP L HL DCLVFPQ
Sbjct: 791  ENCFSKHGSRFNERNDNLEVIKGFVVIAKNPCLHPGDVRILEAVDVPDLHHLYDCLVFPQ 850

Query: 873  KGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRHSDIID 694
            KG+RPHT+EASGSDLDGDLYFVTWDE+LIPPSK+SW+PM+Y AAE K+L R V   DII+
Sbjct: 851  KGERPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMQYDAAETKQLTRPVTQEDIIE 910

Query: 693  FFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVNMPRNL 514
            FF+KNMVN+ LGTICNAHVVHAD+S+ GALDEKC+KLA+LAA AVDFPKTGKIV MP NL
Sbjct: 911  FFSKNMVNENLGTICNAHVVHADLSEHGALDEKCLKLADLAATAVDFPKTGKIVTMPFNL 970

Query: 513  RPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSSELHIDPLLVPYDKDLVVN 334
            +PKLYPDFMGK+++QSYKSNKILG+LYR+I+D ++ D+T SSE++  P  +PYD DL V+
Sbjct: 971  KPKLYPDFMGKDEYQSYKSNKILGKLYRKIKDAYDEDVTASSEINFLPSDIPYDIDLEVS 1030

Query: 333  ETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMKERIEH 154
              +DF+ DAW  K SYD QLNGLLGQY+V+REEE+VTGHIWSMPK+S++KQ E+KER++H
Sbjct: 1031 GASDFIVDAWEQKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSSRKQGELKERLKH 1090

Query: 153  AYSALRKEFRKVFDHLGAEFDQMSEEEKNVIYEKKASAWYQVTYHPVWVEK 1
            +YSAL+KEFR++F+ +  +F+++S++EKN+IYE+KASAWYQVTYHP WV+K
Sbjct: 1091 SYSALKKEFRQIFEKMEEKFEELSDDEKNIIYEQKASAWYQVTYHPEWVKK 1141


>ref|XP_011081567.1| RNA-dependent RNA polymerase 6 [Sesamum indicum]
 ref|XP_020550370.1| RNA-dependent RNA polymerase 6 [Sesamum indicum]
          Length = 1205

 Score = 1497 bits (3875), Expect = 0.0
 Identities = 730/1136 (64%), Positives = 886/1136 (77%), Gaps = 5/1136 (0%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYDADLDQIKKVNDYEKV 3214
            +SVGG +N VTAK LLDYF +N G+VWRCR+K SSTPP++ P Y+ D + +++  DY K+
Sbjct: 19   ISVGGLENYVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESNPNYEIDAESVQRKTDYVKI 78

Query: 3213 KPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIENV 3034
            +PHAFV F V       L+A                 GP+NPYRMN+RR    P ++ +V
Sbjct: 79   EPHAFVHFAVAHSAKAALDAAARGELILGRKPLKVSLGPQNPYRMNERRRTTTPYKLSDV 138

Query: 3033 ILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCNF 2854
            ++E G++   D F+VGWRG ++GVDFLVDPF+ +CK  FT+ T FSFKG    AVIKCNF
Sbjct: 139  LIEIGVMRSRDEFLVGWRGPRTGVDFLVDPFNGTCKLHFTRNTAFSFKGEARSAVIKCNF 198

Query: 2853 KVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIAITHPSQMLDDDDPW 2674
            K+EFL R++N I +Y  +++    VL+ QLASSPL++YRTADD+I  + P  +LDDDDPW
Sbjct: 199  KIEFLPREINEINQY--RDFSSLIVLL-QLASSPLVYYRTADDDIEESVPFDLLDDDDPW 255

Query: 2673 IRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRI--EHVKTKLKVLEEPG 2500
            IRTTDFT SGAIGRCNTYRI  R R+ P   +ALE+L K RV +  E     L+V +EP 
Sbjct: 256  IRTTDFTPSGAIGRCNTYRISARPRNGPSLFKALEYLRKLRVPVLDESPGRTLRVQDEPD 315

Query: 2499 FGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAAL 2320
            FG PM D  F + +K+ I+FK +FLVN+VMH+ IINQHQ +E+ FDLLR QPEE+N+ AL
Sbjct: 316  FGMPMSDPFFCLQYKEGISFKIMFLVNAVMHKGIINQHQMSEKFFDLLRSQPEELNIVAL 375

Query: 2319 KHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPPE 2140
            KH+ SY R    +   +L+ VQKW LNNPKLLE+P E +DV+EVRRLIITP+K YCLPPE
Sbjct: 376  KHMCSYKRPVY-DAIKALDFVQKWLLNNPKLLERPREMDDVVEVRRLIITPSKAYCLPPE 434

Query: 2139 VELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMFR 1960
            VELSNRVLR+Y+ ++DRFLRVTFMDE M+TLN +VL +Y +PIV+DITS+   Q+T MF+
Sbjct: 435  VELSNRVLRNYKNIADRFLRVTFMDEAMQTLNKNVLMYYASPIVRDITSNSNPQRTNMFK 494

Query: 1959 RVKHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIAK 1780
            RVK IL  G Y+CGR+Y FLAFSANQLRDRSAWFFAED+      I SWMGKF  +N+AK
Sbjct: 495  RVKDILVNGFYLCGRKYTFLAFSANQLRDRSAWFFAEDKNTGVANIKSWMGKFTQRNVAK 554

Query: 1779 CAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLTE 1600
            CAARMGQCFSSTYAT+EVP  +V+ +  D+ RN YVFSDGIG +S +LA+EVAEKLQL  
Sbjct: 555  CAARMGQCFSSTYATIEVPLTKVNSQFPDVERNGYVFSDGIGMISADLAIEVAEKLQLGS 614

Query: 1599 NQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFLN 1420
            N PCAYQIRYAG KGVV  WP  K D ++L LR SM KFES H  LEICSWTR QPGFLN
Sbjct: 615  NPPCAYQIRYAGYKGVVARWP-AKDDGVRLYLRRSMKKFESNHKTLEICSWTRFQPGFLN 673

Query: 1419 RQIITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAAG 1240
            RQI+TLLSALEV+D+IFW MQ  MV  L+ ML D+D AFDV+TASC + GNTA++ML+AG
Sbjct: 674  RQIVTLLSALEVQDDIFWRMQETMVSRLDWMLEDSDTAFDVLTASCTDQGNTAALMLSAG 733

Query: 1239 FKPHTEPHLRGMLSSIRVAQLKDLREKS---RIFVQDGRWLMGCLDELAVLEQGQCFIQV 1069
            F+P TEPHLRGML+SIR AQL DL E++   RIFV  GRWLMGCLDEL  LE GQCFIQV
Sbjct: 734  FRPQTEPHLRGMLTSIRAAQLGDLSERATIARIFVPLGRWLMGCLDELGKLEHGQCFIQV 793

Query: 1068 SKPSIENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDC 889
            S PSIE+CF KHGS+F  TK+ L V+ G V +AKNPCLHPGDVR+L+AV+VP L HL DC
Sbjct: 794  SNPSIEDCFVKHGSQFSETKKKLQVVTGLVAIAKNPCLHPGDVRILEAVDVPELHHLYDC 853

Query: 888  LVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRH 709
            LVFPQKGDRPHT+EASGSDLDGDLYFVTWDE+LIPPSK+SW PMEY   E K+LPR+V+H
Sbjct: 854  LVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWTPMEYAPGEVKQLPREVKH 913

Query: 708  SDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVN 529
            SDIIDFFTKNMVN+ LG ICNAHVVHAD+S+ GALDEKCIKLAELAA AVDFPKTGKIVN
Sbjct: 914  SDIIDFFTKNMVNESLGAICNAHVVHADLSEYGALDEKCIKLAELAATAVDFPKTGKIVN 973

Query: 528  MPRNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSSELHIDPLLVPYDK 349
            MP  L+PK YPDFMGKE+FQSY S+KILG+LYR+I+D ++ D   S E       + YD+
Sbjct: 974  MPAELKPKTYPDFMGKEEFQSYNSSKILGKLYRKIKDAYDRDHEASREHTFASDDIIYDQ 1033

Query: 348  DLVVNETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMK 169
            DL V  +  F+ DAW+CK SYD QL GLLGQY+V+REEE+VTGHIWSMPK+S+KKQ E+K
Sbjct: 1034 DLEVTGSTGFIGDAWNCKCSYDGQLIGLLGQYKVNREEEVVTGHIWSMPKYSSKKQGELK 1093

Query: 168  ERIEHAYSALRKEFRKVFDHLGAEFDQMSEEEKNVIYEKKASAWYQVTYHPVWVEK 1
            ER++HAYS LRKEFRKVF+ +G EFDQ+ ++EKN++YE+KASAWYQVTY   WV+K
Sbjct: 1094 ERLKHAYSTLRKEFRKVFECMGPEFDQLWDDEKNIMYERKASAWYQVTYKDSWVKK 1149


>ref|XP_010648660.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score = 1494 bits (3867), Expect = 0.0
 Identities = 729/1134 (64%), Positives = 895/1134 (78%), Gaps = 3/1134 (0%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYDA-DLDQIKKVNDYEK 3217
            +S+GGFD  VTA EL  Y  +  G V RCR+K SSTPP++YP+++  D  +I++  DY+K
Sbjct: 15   ISIGGFDQYVTATELTYYLEDTIGSVDRCRLKTSSTPPESYPDFEIIDTAKIERTEDYKK 74

Query: 3216 VKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIEN 3037
            V+PHAFV FV P+     L+A                 GPE P+ +NQRR    P +  +
Sbjct: 75   VEPHAFVHFVSPEAATWALDAAGKSELFLHGKPLKVSLGPETPFHLNQRRRTTFPFKFPD 134

Query: 3036 VILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCN 2857
            V LE G+L   D +  GWRG  SGVDFLVDPFD +CKFLFTK+T FSFKG   HAVIKCN
Sbjct: 135  VRLEIGILVSRDEYFAGWRGPSSGVDFLVDPFDGTCKFLFTKDTAFSFKGMPKHAVIKCN 194

Query: 2856 FKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIAITHPSQMLDDDDP 2677
            FKVEFLVR++N +++   +      +L+ QL+SSP ++YRTADD+I  T P  +LDDDDP
Sbjct: 195  FKVEFLVREINEVRQ---RRDMSSLILLLQLSSSPFVYYRTADDDIEETVPFDLLDDDDP 251

Query: 2676 WIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRI--EHVKTKLKVLEEP 2503
            WIRTTDFT SGAIGRCN+YRI I  R   K ++A+++L  +RV +  +  K +L+V +EP
Sbjct: 252  WIRTTDFTVSGAIGRCNSYRISIPPRYGAKLKKAMDYLRARRVNVLEDSPKWQLRVRDEP 311

Query: 2502 GFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAA 2323
             FG PM D  F I HK+ I+F+ +FLVN+VMH+ IINQHQ +++ FDLLR Q ++IN+AA
Sbjct: 312  DFGLPMSDPFFCIQHKEGIDFRVMFLVNAVMHKGIINQHQLSDKFFDLLRSQQKDINIAA 371

Query: 2322 LKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPP 2143
            LKHI SY RH + + +  L++V KW L NPKLL+ P E +D++EVRRL+ITP+K YCLPP
Sbjct: 372  LKHICSY-RHPVFDAYQRLKLVHKWLLKNPKLLKSPKELDDIVEVRRLVITPSKAYCLPP 430

Query: 2142 EVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMF 1963
            EVELSNRVLR+Y+EVSDRFLRVTFMDEGM+T+N +VL++Y APIVK ITS+   QKT +F
Sbjct: 431  EVELSNRVLRNYKEVSDRFLRVTFMDEGMQTINANVLNYYVAPIVKVITSNSFPQKTRVF 490

Query: 1962 RRVKHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIA 1783
            +RVK IL+ G Y+CGR+Y FLAFS+NQLRDRSAWFFAED+K + + I SWMGKF N+N+A
Sbjct: 491  KRVKTILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKKTSVRAIKSWMGKFTNRNVA 550

Query: 1782 KCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLT 1603
            KCAARMGQCFSSTYATVEVP  EV  +L DI RN Y FSDGIGK+ P+LA+EVAEKL+L 
Sbjct: 551  KCAARMGQCFSSTYATVEVPSWEVK-ELPDIKRNGYDFSDGIGKIVPDLAMEVAEKLKL- 608

Query: 1602 ENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFL 1423
            E  P AYQIRYAGCKGVV  WP    D I+LS RPSMNKF S+HTILEICSWTR QPGFL
Sbjct: 609  EGTPSAYQIRYAGCKGVVACWPSDN-DGIRLSWRPSMNKFLSDHTILEICSWTRFQPGFL 667

Query: 1422 NRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAA 1243
            NRQI+TLLSAL V D+IFW MQ  M+  LNQML DTDVAFDV+ ASCAE GNTA+IML+A
Sbjct: 668  NRQIVTLLSALNVPDKIFWKMQESMISKLNQMLTDTDVAFDVLIASCAEQGNTAAIMLSA 727

Query: 1242 GFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVLEQGQCFIQVSK 1063
            GFKP TEPHL+GML+ IR AQ   LREK+RIFV  GRWLMGCLDEL VLEQGQCFIQVS 
Sbjct: 728  GFKPQTEPHLQGMLTCIRAAQFWGLREKARIFVPSGRWLMGCLDELGVLEQGQCFIQVSS 787

Query: 1062 PSIENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDCLV 883
            PS+ENCF KHGSRF   ++NL VI+G V +AKNPCLHPGDVR+L+AV+ PGLEHLVDCLV
Sbjct: 788  PSLENCFLKHGSRF-SAQKNLKVIKGIVAIAKNPCLHPGDVRILEAVDAPGLEHLVDCLV 846

Query: 882  FPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRHSD 703
            FPQKGDRPH++EASGSDLDGDLYFVTW+E LIPPSKQSW PM+Y +AEAK L R+V   D
Sbjct: 847  FPQKGDRPHSNEASGSDLDGDLYFVTWEETLIPPSKQSWPPMQYDSAEAKALAREVTSLD 906

Query: 702  IIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVNMP 523
            IIDFFTKNMVN+ LG ICNAHVVHAD S+ GALDE C+ LAE AA AVDFPKTGK+V +P
Sbjct: 907  IIDFFTKNMVNENLGAICNAHVVHADRSEYGALDEACLDLAERAATAVDFPKTGKLVTLP 966

Query: 522  RNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSSELHIDPLLVPYDKDL 343
              L+PK+YPDFMGKE+FQ+Y+SNKILG++YRQI+D +N D++ SSE       VP+D+DL
Sbjct: 967  PYLKPKMYPDFMGKEEFQTYRSNKILGKMYRQIKDAYNEDVSESSEQIFGADKVPFDEDL 1026

Query: 342  VVNETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMKER 163
             +  +ADF+NDAW  K SYD QLNGLLGQY+V REEE+VTGH+WSMPK+ ++KQ E+ ER
Sbjct: 1027 GIPGSADFINDAWIHKCSYDGQLNGLLGQYKVKREEEVVTGHVWSMPKYKSRKQGELTER 1086

Query: 162  IEHAYSALRKEFRKVFDHLGAEFDQMSEEEKNVIYEKKASAWYQVTYHPVWVEK 1
            ++HAYS+L+KEFR++F+ + ++FDQ++++EKN +YE+KASAWYQVTYHP WV+K
Sbjct: 1087 LKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRLYEQKASAWYQVTYHPTWVKK 1140


>gb|PON56884.1| RNA-dependent RNA polymerase-type [Trema orientalis]
          Length = 1197

 Score = 1489 bits (3856), Expect = 0.0
 Identities = 718/1132 (63%), Positives = 889/1132 (78%), Gaps = 1/1132 (0%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYD-ADLDQIKKVNDYEK 3217
            VS+GGF  +V AK+L+D+  +  GVV+RCR+K S TP ++YP ++ AD   I++ +D   
Sbjct: 15   VSIGGFGRDVNAKDLMDFLEDEVGVVFRCRLKTSWTPSESYPNFEVADTADIERADDARI 74

Query: 3216 VKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIEN 3037
            V+PHAFV F +PD     L+                  GPENP+RMNQRR    PI++ +
Sbjct: 75   VEPHAFVHFALPDSATWALKVAASGKLELNDQPLKVTLGPENPFRMNQRRRTTTPIKLAD 134

Query: 3036 VILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCN 2857
            V LE G L   D F V WRG   GVDFLVDPFD +CKF FTK+T FS K      V+KC+
Sbjct: 135  VHLEIGTLVKRDEFFVAWRGPPRGVDFLVDPFDGACKFCFTKDTAFSCKDIAKLTVMKCD 194

Query: 2856 FKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIAITHPSQMLDDDDP 2677
            FKVEFLVRD+N IK+Y    Y    V++ QLASSP ++YRTADD+I I+ P  +LDDDDP
Sbjct: 195  FKVEFLVRDINEIKQYTDTSY---LVVLLQLASSPRVWYRTADDDIEISVPFDLLDDDDP 251

Query: 2676 WIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRIEHVKTKLKVLEEPGF 2497
            WIRT+DFT SGA+GRCN+YR+ I  R   K ++A+ +L +QRV+  +++  L++  EP F
Sbjct: 252  WIRTSDFTPSGAVGRCNSYRVSIPPRHGAKLKKAMNYLREQRVKDSYLRLPLRIQNEPDF 311

Query: 2496 GTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAALK 2317
            G PM D  F +H+ + I F+ +FL+N V+H+ I NQ+Q ++ VFDLLR QP+E+NVA LK
Sbjct: 312  GMPMSDPFFCLHYSEGIPFEIMFLLNVVVHKGIFNQYQISDAVFDLLRNQPKEVNVATLK 371

Query: 2316 HIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPPEV 2137
            HI SY +H + + +  L++VQ+W L NPKL++ P + +D+ EVRRL+ITPT+ YCLPPEV
Sbjct: 372  HISSY-KHPVFDAYKRLKLVQEWLLRNPKLMKTPKQLDDIAEVRRLVITPTRAYCLPPEV 430

Query: 2136 ELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMFRR 1957
            ELSNRVLR YREV+DRFLRVTFMDEGM+T+N H+L++Y APIVK++TS+   QKT +F R
Sbjct: 431  ELSNRVLRKYREVADRFLRVTFMDEGMQTMNMHLLNYYAAPIVKELTSNSFPQKTKIFSR 490

Query: 1956 VKHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIAKC 1777
            VK IL++G Y+CGR+Y FLAFS+NQLRDRSAWFFAED KI    I+ WMGKF+++NIAKC
Sbjct: 491  VKSILTKGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKIAVSHIIRWMGKFSSRNIAKC 550

Query: 1776 AARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLTEN 1597
            AARMGQCFSSTYATVEVP  EV+ KL DI RN Y FSDGIG ++PELA+EVAEKL+L  +
Sbjct: 551  AARMGQCFSSTYATVEVPLTEVNFKLPDIERNTYNFSDGIGIITPELAMEVAEKLKLNID 610

Query: 1596 QPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFLNR 1417
             P AYQIRYAGCKGVV  WP  KGD ++LSLR SMNKF+S HTILEICSWTR QPGFLNR
Sbjct: 611  PPSAYQIRYAGCKGVVACWP-AKGDGVRLSLRRSMNKFQSNHTILEICSWTRFQPGFLNR 669

Query: 1416 QIITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAAGF 1237
            QIITLLS L V DEIFW MQ  MV  LNQML D DVAF+V+TASCAE GN A++ML+AGF
Sbjct: 670  QIITLLSTLNVPDEIFWKMQETMVSKLNQMLTDADVAFNVLTASCAEQGNVAAMMLSAGF 729

Query: 1236 KPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVLEQGQCFIQVSKPS 1057
            KP +EPHLRGML  IR AQL DLREK+RIFV  GRWLMGCLDEL VLE GQCFIQVSKPS
Sbjct: 730  KPQSEPHLRGMLMCIRAAQLWDLREKARIFVPSGRWLMGCLDELGVLEGGQCFIQVSKPS 789

Query: 1056 IENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDCLVFP 877
            +ENCF KHGSRF   + NL VI+G+VV+AKNPCLHPGD+R+L+AV+ P L HL DCLVFP
Sbjct: 790  LENCFTKHGSRFCKRENNLEVIKGFVVIAKNPCLHPGDIRILEAVDAPDLHHLYDCLVFP 849

Query: 876  QKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRHSDII 697
            Q GDRPHT+EASGSDLDGDLYFVTWDE+LIPPSK+SW PM+Y  A+AKELPRDV   DII
Sbjct: 850  QNGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWTPMQYDPAQAKELPRDVSQRDII 909

Query: 696  DFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVNMPRN 517
            DFF+KNMVN+ LG ICNAHVVHAD+S CGALDEKCIKLAELAA AVDFPKTG IV MP +
Sbjct: 910  DFFSKNMVNETLGAICNAHVVHADLSKCGALDEKCIKLAELAATAVDFPKTGIIVTMPPH 969

Query: 516  LRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSSELHIDPLLVPYDKDLVV 337
            L+PKLYPDFMGK ++QSYKS KILG LYR I D ++ +++ SSEL+  P  +PY+ DL V
Sbjct: 970  LKPKLYPDFMGKAEYQSYKSTKILGRLYRLIRDAYDEEMSTSSELYFAPNDIPYEADLEV 1029

Query: 336  NETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMKERIE 157
              + +F++DAW+ K SYD QLNGL+GQY+V REEE+VTG IWSMPK++++KQ ++KE+++
Sbjct: 1030 PGSVNFIDDAWNLKCSYDGQLNGLMGQYKVKREEEVVTGQIWSMPKNNSRKQGDLKEKLK 1089

Query: 156  HAYSALRKEFRKVFDHLGAEFDQMSEEEKNVIYEKKASAWYQVTYHPVWVEK 1
            H+YSALRKEFR+ F+ +  +F+Q++E+EKN++YEKKASAWYQVTY+P WV+K
Sbjct: 1090 HSYSALRKEFRQKFEKMDPDFEQLTEDEKNILYEKKASAWYQVTYNPEWVKK 1141


>ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
          Length = 1195

 Score = 1489 bits (3855), Expect = 0.0
 Identities = 715/1133 (63%), Positives = 887/1133 (78%), Gaps = 2/1133 (0%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYD-ADLDQIKKVNDYEK 3217
            VS+GGFD  VTAK+LL+Y     G+VWRCR+K S TPP++YP ++ ADL +I +  DY +
Sbjct: 15   VSIGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEIADLTKITRTEDYRR 74

Query: 3216 VKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIEN 3037
            V+PHAFV F +P+     ++A +               GPENP+ +NQRR +  P ++ +
Sbjct: 75   VEPHAFVHFALPESATWAIDAADRCELFLNNKGLKASLGPENPFTLNQRRRKTTPFKLSD 134

Query: 3036 VILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCN 2857
            V +E G L   D F VGWRG  +GVDFLVDPFD +C+F F++ T FSFK T  HAVIKC+
Sbjct: 135  VDVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAFSFKSTAEHAVIKCD 194

Query: 2856 FKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIAITHPSQMLDDDDP 2677
            FKVEFLVRD+N IK+Y   +     VL+ QLAS+P ++YRTADD+I ++ P  +LDDDDP
Sbjct: 195  FKVEFLVRDINEIKQY---KETSCLVLLLQLASAPWVWYRTADDDIEVSVPFDLLDDDDP 251

Query: 2676 WIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRIEHVKTKLKVLEEPGF 2497
            WIRTTDFT SGAIGRC++YR+ I  R  PK  +A++FL+++RV+ E+++  +++ +EP F
Sbjct: 252  WIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYLRRPIRIRDEPDF 311

Query: 2496 GTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAALK 2317
            G PM D  F IHHK+ I F  LFLVN+VMH+ I NQHQ +   FDLLR QP E+NVAALK
Sbjct: 312  GMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQPTEVNVAALK 371

Query: 2316 HIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPPEV 2137
            HIY Y R    + +  L+V Q+W L NPKL +   + +D+ E+RRLIITPTK YCLPPEV
Sbjct: 372  HIYPYRRPVF-DAYKKLKVTQEWLLKNPKLFKNQKKLDDIAEIRRLIITPTKAYCLPPEV 430

Query: 2136 ELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMFRR 1957
            ELSNRVLR Y++V+DRFLRVTFMDEG++T+N++ L+++ APIV+ ITS    QKT +F+R
Sbjct: 431  ELSNRVLRKYKDVADRFLRVTFMDEGVQTMNSNALNYFAAPIVRAITSYSFPQKTRIFKR 490

Query: 1956 VKHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIAKC 1777
            V+ IL++G Y+CGRRY FLAFS+NQLRDRSAWFFAED  I    I SWMGKF NKNIAKC
Sbjct: 491  VRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIKSWMGKFTNKNIAKC 550

Query: 1776 AARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLTEN 1597
            AARMGQCFSSTYAT+EVP  EV+  L DI RN Y FSDGIG ++P+LA EVAEKL+   +
Sbjct: 551  AARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPDLAREVAEKLKFDFD 610

Query: 1596 QPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFLNR 1417
             P AYQIRYAGCKGVV  WP++ GD I+LSLR SMNKF+S HTILEICSWTR QPGFLNR
Sbjct: 611  PPSAYQIRYAGCKGVVACWPEQ-GDGIRLSLRSSMNKFQSNHTILEICSWTRFQPGFLNR 669

Query: 1416 QIITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAAGF 1237
            QIITLLSAL V D +FW MQ  MV  LNQML D+DVAFDV+TASCAE GN A+IML+AGF
Sbjct: 670  QIITLLSALNVPDAVFWKMQEIMVSKLNQMLVDSDVAFDVLTASCAELGNVAAIMLSAGF 729

Query: 1236 KPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVLEQGQCFIQVSKPS 1057
            KP  EPHLRGML+ +R AQL  LREK+RIFV  GRWLMGCLDELAVLEQGQCFIQVS   
Sbjct: 730  KPQKEPHLRGMLNCVRAAQLWGLREKARIFVPSGRWLMGCLDELAVLEQGQCFIQVSNSY 789

Query: 1056 IENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDCLVFP 877
            +ENCF KHGS+F  TKRNL V++G VV+AKNPCLHPGD+R+L+AV+ PGL HL DCLVFP
Sbjct: 790  LENCFVKHGSKFSETKRNLQVVKGTVVIAKNPCLHPGDIRILEAVDDPGLHHLYDCLVFP 849

Query: 876  QKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRHSDII 697
            QKG+RPH +EASGSDLDGDLYFVTWDE+LIPPSK+SW+PM+Y AAEAK+L R V H DII
Sbjct: 850  QKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQLTRPVNHQDII 909

Query: 696  DFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVNMPRN 517
            +FF KNM N+ LG ICNAHVV AD+S+ GALDEKC+ LAELAA AVDFPKTGKIV+MP +
Sbjct: 910  EFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPKTGKIVSMPSD 969

Query: 516  LRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCF-NTDITPSSELHIDPLLVPYDKDLV 340
            L+PK+YPDFMGKE+ QSYKS KILG LYRQI+D + + D+  SS+L+  P  VPYD DL 
Sbjct: 970  LKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSDLNFVPGDVPYDLDLE 1029

Query: 339  VNETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMKERI 160
            V    D+++DAW  K SYD QLNGLL QY+V REEE+VTGH+WSMPK S+++Q ++KER+
Sbjct: 1030 VLGATDYISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMPKGSSRQQGDLKERL 1089

Query: 159  EHAYSALRKEFRKVFDHLGAEFDQMSEEEKNVIYEKKASAWYQVTYHPVWVEK 1
            +H+Y+ L++EFR+VF+ +  +F Q+ ++EKN++YE+KASAWYQVTYHP W++K
Sbjct: 1090 KHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYHPRWIQK 1142


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score = 1486 bits (3848), Expect = 0.0
 Identities = 722/1133 (63%), Positives = 889/1133 (78%), Gaps = 2/1133 (0%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYDADLDQIKKVNDYEKV 3214
            +SVGGFDN+V AK L +Y  E  G VWRCR+K S+TPPD+YP YD D  ++ ++ DYEKV
Sbjct: 15   ISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDVDAARVHRMKDYEKV 74

Query: 3213 KPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIENV 3034
             PHAFV F   +     L A                 GPENPYR+NQRR   MP +  +V
Sbjct: 75   VPHAFVHFASSESAKYALAAAGGNGLILGKKPLIVSLGPENPYRLNQRRRTTMPFKFSDV 134

Query: 3033 ILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCNF 2854
             +E G+L   D+FVVGWRG ++GVDF VDPF+ +CK LFTK+T FSF+G   HA+IKCNF
Sbjct: 135  SVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGACKILFTKDTAFSFRGEAKHAIIKCNF 194

Query: 2853 KVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIAITHPSQMLDDDDPW 2674
            K+EF+VR++N IK++  K++    V++ QLASSPL+FYRTADD+I  +    +LDDDD W
Sbjct: 195  KIEFMVREINEIKKF--KDFTS-LVILLQLASSPLVFYRTADDDIEESVAFDLLDDDDQW 251

Query: 2673 IRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRIEHV--KTKLKVLEEPG 2500
            IRTTD T SGAIGRCNTYRI IR R+ P  E+A+ +    RV +  +  +  L+V +EP 
Sbjct: 252  IRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCNRKMLRVRDEPD 311

Query: 2499 FGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAAL 2320
            FG  M D  F   + + I+FK +FLVN+V+H+ I+NQHQ T   F LLR   EE+N+AAL
Sbjct: 312  FGVSMSDPFFCFQN-EGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSHQEEVNLAAL 370

Query: 2319 KHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPPE 2140
            KH++SY +  + +    L  +QKW L NPKLLE+  E +D++EVRRL+ITPTK YCLPP 
Sbjct: 371  KHMFSY-KWPVNDAIQKLVGIQKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPT 429

Query: 2139 VELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMFR 1960
            VELSNRVLR+Y+ V+DRFLRVTFMDEGM  LN +VL++Y A IV++ITS+   Q+T +F+
Sbjct: 430  VELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQ 489

Query: 1959 RVKHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIAK 1780
            RVK ILS+G ++CGR+Y FLAFSANQLRDRSAWFFAED KI    I+SWMG+F+N+N+AK
Sbjct: 490  RVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAK 549

Query: 1779 CAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLTE 1600
            CAARMGQCFSSTYATVEVP +EV+ +L DI RN YVFSDGIG +S +LALEVAEKL L+ 
Sbjct: 550  CAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLALEVAEKLHLSV 609

Query: 1599 NQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFLN 1420
            N P AYQIRYAGCKGVV  WP K  D I LSLRPSM KF+S HTILEICSWTR QPGFLN
Sbjct: 610  NPPSAYQIRYAGCKGVVACWPTKN-DGILLSLRPSMKKFDSNHTILEICSWTRFQPGFLN 668

Query: 1419 RQIITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAAG 1240
            RQI+TLLS+L+VKD IFW+MQ +M+  LN+ML D+DVAFDVITASCAE+GNTA+IML+AG
Sbjct: 669  RQIVTLLSSLDVKDGIFWEMQKEMISGLNKMLVDSDVAFDVITASCAEAGNTAAIMLSAG 728

Query: 1239 FKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVLEQGQCFIQVSKP 1060
            FKP +EPHLRGMLSSIR +QL DLR K+RIFV  GRWLMGCLDEL  LEQGQCFIQVS P
Sbjct: 729  FKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSP 788

Query: 1059 SIENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDCLVF 880
            S+ENCF KHG +F   K+NL V++G VV+AKNPCLHPGDVR+L+AV+VPGL HL DCLVF
Sbjct: 789  SLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVF 848

Query: 879  PQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRHSDI 700
            PQKGDRPH++EASGSDLDGDLYFVTWDE+LIPPSK+SW+PM Y  AE K+L R V H DI
Sbjct: 849  PQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDI 908

Query: 699  IDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVNMPR 520
            IDFF+KNMV + LG ICNAHVVHAD+S+ GALDEKC+KLAELAA+AVDFPKTGK+V MP 
Sbjct: 909  IDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPF 968

Query: 519  NLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSSELHIDPLLVPYDKDLV 340
            +L+PK+YPDFMGKE+FQSYKS KILG+LYRQ++D  +T+   S+ L + P  +PYD  L 
Sbjct: 969  DLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPNDIPYDSSLE 1028

Query: 339  VNETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMKERI 160
            +  +  F+ DAW+CK SYD QL+GLLGQY+V+REEE+VTGHIWSMPK+S KKQ E+KER+
Sbjct: 1029 IPGSTVFMGDAWNCKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERL 1088

Query: 159  EHAYSALRKEFRKVFDHLGAEFDQMSEEEKNVIYEKKASAWYQVTYHPVWVEK 1
            +HAY+ LRKEFR VF+ +  +FD + ++EKN +YE+KASAWYQVTY+P WV +
Sbjct: 1089 KHAYNMLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVAR 1141


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
 gb|PNT33711.1| hypothetical protein POPTR_006G253500v3 [Populus trichocarpa]
          Length = 1198

 Score = 1486 bits (3846), Expect = 0.0
 Identities = 710/1133 (62%), Positives = 881/1133 (77%), Gaps = 2/1133 (0%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYD-ADLDQIKKVNDYEK 3217
            VS+GGFD  VTAK+LL+Y     G+VWRCR+K S TPP++YP ++  D+ +I +  DY +
Sbjct: 15   VSLGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEITDITKITRTEDYRR 74

Query: 3216 VKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIEN 3037
            V+PHAFV F +P      ++A +               GPENP+ +NQRR +  P ++  
Sbjct: 75   VEPHAFVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENPFTLNQRRRKTTPFKLSG 134

Query: 3036 VILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCN 2857
            V +E G L   D F VGWRG  +GVDFLVDPFD +C+F F++ T FSFK T  HAVIKC+
Sbjct: 135  VGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAFSFKSTAEHAVIKCD 194

Query: 2856 FKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIAITHPSQMLDDDDP 2677
            FKVEFLVRD+N IK+Y         VL+ QLAS+P ++YRTADD+I ++ P  +LDDDDP
Sbjct: 195  FKVEFLVRDINEIKQYTETSC---LVLLLQLASAPRVWYRTADDDIEVSVPFDLLDDDDP 251

Query: 2676 WIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRIEHVKTKLKVLEEPGF 2497
            WIRTTDFT SGAIGRC++YR+ I  R  PK  +A++FL+++RV+ E+++  +++ +EP F
Sbjct: 252  WIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYLRRPIRIRDEPDF 311

Query: 2496 GTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAALK 2317
            G PM D  F IHHK+ I F  LFLVN+VMH+ I NQHQ +   FDLLR QP E+NVAALK
Sbjct: 312  GMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQPTEVNVAALK 371

Query: 2316 HIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPPEV 2137
            HIY Y R    + +  L+V Q+W L NPK  +   + +D+ E+RRL+ITPTK YCLPPEV
Sbjct: 372  HIYPYRRPVF-DAYKKLKVAQEWLLKNPKFFKNQKKLDDIAEIRRLVITPTKAYCLPPEV 430

Query: 2136 ELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMFRR 1957
            ELSNRVLR Y++V+DRFLRVTFMDEG++T+N++ L+++ APIV+ ITS    QKT +F+R
Sbjct: 431  ELSNRVLRKYKDVADRFLRVTFMDEGLQTMNSNALNYFAAPIVRAITSYSFPQKTRIFKR 490

Query: 1956 VKHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIAKC 1777
            V+ IL++G Y+CGRRY FLAFS+NQLRDRSAWFFAED  I    I SWMGKF NKNIAKC
Sbjct: 491  VRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIKSWMGKFTNKNIAKC 550

Query: 1776 AARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLTEN 1597
            AARMGQCFSSTYAT+EVP  EV+  L DI RN Y FSDGIG ++P+LA EVAEKL+   +
Sbjct: 551  AARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPDLAREVAEKLKFDFD 610

Query: 1596 QPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFLNR 1417
             PCAYQIRYAGCKGVV  WP++ GD I+LSLR SMNKF+S HTILEICSWTR QPGFLNR
Sbjct: 611  PPCAYQIRYAGCKGVVACWPEQ-GDGIRLSLRSSMNKFQSNHTILEICSWTRFQPGFLNR 669

Query: 1416 QIITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAAGF 1237
            QIITLLSAL V D +FW MQ  MV  LNQML D+DVAFDV+TASCAE GN A+IML+AGF
Sbjct: 670  QIITLLSALNVPDAVFWKMQELMVSKLNQMLVDSDVAFDVLTASCAEQGNVAAIMLSAGF 729

Query: 1236 KPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVLEQGQCFIQVSKPS 1057
            KP  EPHLRGML+ +R AQL  LREK+RIFV  GRWLMGCLDEL VLEQGQCFIQVS   
Sbjct: 730  KPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQGQCFIQVSNSY 789

Query: 1056 IENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDCLVFP 877
            +ENCF KHGS+F  TK+NL V++G VV+AKNPCLHPGD+R+L+AV+ PGL HL DCLVFP
Sbjct: 790  LENCFVKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLVFP 849

Query: 876  QKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRHSDII 697
            QKG+RPH +EASGSDLDGDLYFVTWDE+LIPPSK+SW+PM+Y AAEAK+L R V H DI+
Sbjct: 850  QKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQLTRPVNHQDIV 909

Query: 696  DFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVNMPRN 517
            +FF KNM N+ LG ICNAHVV AD+S+ GALDEKC+ LAELAA AVDFPKTGKIV+MP +
Sbjct: 910  EFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPKTGKIVSMPSD 969

Query: 516  LRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCF-NTDITPSSELHIDPLLVPYDKDLV 340
            L+PK+YPDFMGKE+ QSYKS KILG LYRQI+D + + D+  SSEL+     +PYD DL 
Sbjct: 970  LKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSELNFVRGDIPYDLDLE 1029

Query: 339  VNETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMKERI 160
            V    DF++DAW  K SYD QLNGLL QY+V REEE+VTGH+WSMPK S++KQ ++KER+
Sbjct: 1030 VLGATDFISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMPKGSSRKQGDLKERL 1089

Query: 159  EHAYSALRKEFRKVFDHLGAEFDQMSEEEKNVIYEKKASAWYQVTYHPVWVEK 1
            +H+Y+ L++EFR+VF+ +  +F Q+ ++EKN++YE+KASAWYQVTYHP W++K
Sbjct: 1090 KHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYHPHWIQK 1142


>gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
          Length = 1197

 Score = 1485 bits (3845), Expect = 0.0
 Identities = 715/1134 (63%), Positives = 891/1134 (78%), Gaps = 3/1134 (0%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYDA-DLDQIKKVNDYEK 3217
            VSVGGF   V AK+L++YF    GVVWRCR+K S TPP++YP ++  D   I++ +DY+K
Sbjct: 15   VSVGGFGRHVAAKDLMEYFDNEVGVVWRCRLKTSWTPPESYPNFEILDSTVIQRTDDYKK 74

Query: 3216 VKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIEN 3037
            V+PHAFV F  P      ++A                 GPENPY +N+RR    P ++ +
Sbjct: 75   VEPHAFVHFASPLTATWAVDAAGRTELVFNNQLLKVSLGPENPYYLNRRRRNTTPFKLSD 134

Query: 3036 VILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCN 2857
            V L+ G +   D F VGWRG   GVDFLVDPFD +CKF F+++T FSFKGT  +AVIKC+
Sbjct: 135  VCLDIGGMVSRDEFFVGWRGPPFGVDFLVDPFDGTCKFCFSRDTAFSFKGTTEYAVIKCD 194

Query: 2856 FKVEFLVRDVNVIKEYDVKEYDDPKVLV--FQLASSPLIFYRTADDEIAITHPSQMLDDD 2683
            FKVEFLVRD+N     ++K+Y +P  LV   QLASSP ++YRTADDEI  + P  +LDDD
Sbjct: 195  FKVEFLVRDIN-----EIKQYTEPSGLVVFLQLASSPRVWYRTADDEIEESVPFDLLDDD 249

Query: 2682 DPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRIEHVKTKLKVLEEP 2503
            D WIRTTDFT SGAIGRCNTYR++IR R   K ++AL++L +QRV +++V+  L++ +EP
Sbjct: 250  DQWIRTTDFTPSGAIGRCNTYRVVIRPRHGAKLKKALDYLREQRVPMDYVRWPLRISDEP 309

Query: 2502 GFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAA 2323
             FG  M D  + I +K+ I F+ +FLVN+VMH+ I NQHQ +E  F+LLR QP E+NVAA
Sbjct: 310  DFGRSMSDPFYCIDYKEGIPFEIMFLVNAVMHKGIFNQHQLSEDFFNLLRDQPREVNVAA 369

Query: 2322 LKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPP 2143
            LKHIYSY R    + +  L+ V  W L NP L + P + +D++E+RRL+ITPTK +CL P
Sbjct: 370  LKHIYSYRRPVF-DAYKRLKTVHDWLLRNPILFKSPKQLDDIVEIRRLVITPTKAHCLLP 428

Query: 2142 EVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMF 1963
            EVELSNRVLR Y+EV+DRFLRVTFMDEGM+T+N +VL++Y A IV+D+TS+F +QKT +F
Sbjct: 429  EVELSNRVLRKYKEVADRFLRVTFMDEGMQTINANVLTYYAASIVRDVTSTFFSQKTGVF 488

Query: 1962 RRVKHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIA 1783
            +RV+ IL+ G Y+CGR+Y FLAFSANQLRD SAWFFAED K +  QIL WMGKF N+NIA
Sbjct: 489  KRVRSILTDGFYLCGRKYSFLAFSANQLRDSSAWFFAEDGKTSVLQILRWMGKFTNRNIA 548

Query: 1782 KCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLT 1603
            KCAARMGQCFSSTYATVEVP  EV+  L DI RN YVFSDGIGK++P+LA EVA+KL+L 
Sbjct: 549  KCAARMGQCFSSTYATVEVPSTEVNPFLPDIERNGYVFSDGIGKITPDLAKEVAQKLKLD 608

Query: 1602 ENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFL 1423
             N PCAYQIRYAGCKGVV  WP++ GD ++LSLR SMNKF S+HT LEICSWTR QPGFL
Sbjct: 609  LNPPCAYQIRYAGCKGVVACWPEE-GDGVRLSLRCSMNKFFSDHTTLEICSWTRFQPGFL 667

Query: 1422 NRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAA 1243
            NRQIITLLS   V DE+FW+MQ  MV  LN++L DTDVAF+V+T+SC+E GN A+IML+A
Sbjct: 668  NRQIITLLSTQYVPDEVFWEMQNTMVSKLNKILVDTDVAFEVLTSSCSEQGNAAAIMLSA 727

Query: 1242 GFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVLEQGQCFIQVSK 1063
            GFKP TEPHLRG+L+ +R +QL  LREK+RIFV  GRWLMG LDEL VLEQGQCFIQVS 
Sbjct: 728  GFKPQTEPHLRGILTCVRASQLCGLREKARIFVPSGRWLMGVLDELGVLEQGQCFIQVSN 787

Query: 1062 PSIENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDCLV 883
            PS+ENCF KHGSRF  TK+N  VI+G VV+AKNPCLHPGD+R+L+AV+ PGL HL DCLV
Sbjct: 788  PSVENCFLKHGSRFAETKKNFEVIQGLVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLV 847

Query: 882  FPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRHSD 703
            FPQKG+RPHT+EASGSDLDGDLYFVTW++ LIPP K+SW PM+Y   E KE+ R+V H D
Sbjct: 848  FPQKGERPHTNEASGSDLDGDLYFVTWEDLLIPPGKKSWPPMQYDPGETKEIQREVNHKD 907

Query: 702  IIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVNMP 523
            IIDFF KNMVN+ LGTICNAHVVHAD+S+ GALDEKCI LAELAA AVDFPKTGKIV+MP
Sbjct: 908  IIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIHLAELAATAVDFPKTGKIVSMP 967

Query: 522  RNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSSELHIDPLLVPYDKDL 343
             NL+PKLYPDFMGKE++QSYKS KILG LYR I+D ++ D++ SSE+++D   + YD DL
Sbjct: 968  ANLKPKLYPDFMGKEEYQSYKSRKILGRLYRHIKDVYDEDLSESSEINLDSPDINYDTDL 1027

Query: 342  VVNETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMKER 163
             V  +AD+++DAW  K SYDRQL GLLGQY+V REEE+VTGHIWSMPK++++K  ++KE+
Sbjct: 1028 EVTGSADYIDDAWVKKCSYDRQLIGLLGQYKVKREEEVVTGHIWSMPKYTSRKLGDLKEK 1087

Query: 162  IEHAYSALRKEFRKVFDHLGAEFDQMSEEEKNVIYEKKASAWYQVTYHPVWVEK 1
            + H+Y ALRKEFR++F+ + +E +Q++E+E+N +YE+KASAWYQVTYHP WVEK
Sbjct: 1088 LGHSYGALRKEFRQIFESMDSEIEQLNEDERNELYERKASAWYQVTYHPKWVEK 1141


>ref|XP_017983705.1| PREDICTED: RNA-dependent RNA polymerase 6 [Theobroma cacao]
          Length = 1197

 Score = 1484 bits (3843), Expect = 0.0
 Identities = 714/1134 (62%), Positives = 891/1134 (78%), Gaps = 3/1134 (0%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYDA-DLDQIKKVNDYEK 3217
            VSVGGF   V AK+L++YF    GVVWRCR+K S TPP++YP ++  D   I++ +DY+K
Sbjct: 15   VSVGGFGRHVAAKDLMEYFDNEVGVVWRCRLKTSWTPPESYPNFEILDSTVIQRTDDYKK 74

Query: 3216 VKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIEN 3037
            V+PHAFV F  P      ++A                 GPENPY +N+RR    P ++ +
Sbjct: 75   VEPHAFVHFASPLTATWAVDAAGRTELVFNNQLLKVSLGPENPYYLNRRRRNTTPFKLSD 134

Query: 3036 VILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCN 2857
            V L+ G +   D F VGWRG   GVDFLVDPFD +CKF F+++T FSFKGT  +AVIKC+
Sbjct: 135  VCLDIGGMVSRDEFFVGWRGPPFGVDFLVDPFDGTCKFCFSRDTAFSFKGTTEYAVIKCD 194

Query: 2856 FKVEFLVRDVNVIKEYDVKEYDDPKVLV--FQLASSPLIFYRTADDEIAITHPSQMLDDD 2683
            FKVEFLVRD+N     ++K+Y +P  LV   QLASSP ++YRTADDEI  + P  +LDDD
Sbjct: 195  FKVEFLVRDIN-----EIKQYTEPSGLVVFLQLASSPRVWYRTADDEIEESVPFDLLDDD 249

Query: 2682 DPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRIEHVKTKLKVLEEP 2503
            D WIRTTDFT SGAIGRCNTYR++IR R   K ++AL++L +QRV +++V+  L++ +EP
Sbjct: 250  DQWIRTTDFTPSGAIGRCNTYRVVIRPRHGAKLKKALDYLREQRVPMDYVRWPLRISDEP 309

Query: 2502 GFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAA 2323
             FG  M D  + I +K+ I F+ +FLVN+VMH+ I NQHQ +E  F+LLR QP E+NVAA
Sbjct: 310  DFGRSMSDPFYCIDYKEGIPFEIMFLVNAVMHKGIFNQHQLSEDFFNLLRDQPREVNVAA 369

Query: 2322 LKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPP 2143
            LKHIYSY R    + +  L+ V  W L NP L + P + +D++E+RRL+ITPTK +CL P
Sbjct: 370  LKHIYSYRRPVF-DAYKRLKTVHDWLLRNPILFKSPKQLDDIVEIRRLVITPTKAHCLLP 428

Query: 2142 EVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMF 1963
            EVELSNRVLR Y+EV+DRFLRVTFMDEGM+T+N +VL++Y A IV+D+TS+F +QKT +F
Sbjct: 429  EVELSNRVLRKYKEVADRFLRVTFMDEGMQTINANVLTYYAASIVRDVTSTFFSQKTGVF 488

Query: 1962 RRVKHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIA 1783
            +RV+ IL+ G Y+CGR+Y FLAFSANQLRD SAWFFAED K +  QIL WMGKF N+NIA
Sbjct: 489  KRVRSILTDGFYLCGRKYSFLAFSANQLRDSSAWFFAEDGKTSVLQILRWMGKFTNRNIA 548

Query: 1782 KCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLT 1603
            KCAARMGQCFSSTYATVEVP  EV+  L DI RN YVFSDGIGK++P+LA EVA+KL+L 
Sbjct: 549  KCAARMGQCFSSTYATVEVPSTEVNPFLPDIERNGYVFSDGIGKITPDLAKEVAQKLKLD 608

Query: 1602 ENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFL 1423
             N PCAYQIRYAGCKGVV  WP++ GD ++LSLR SMNKF S+HT LEICSWTR QPGFL
Sbjct: 609  LNPPCAYQIRYAGCKGVVACWPEE-GDGVRLSLRCSMNKFFSDHTTLEICSWTRFQPGFL 667

Query: 1422 NRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAA 1243
            NRQIITLLS   V DE+FW+MQ  MV  LN++L DTDVAF+V+T+SC+E GN A+IML+A
Sbjct: 668  NRQIITLLSTQYVPDEVFWEMQNTMVSKLNKILVDTDVAFEVLTSSCSEQGNAAAIMLSA 727

Query: 1242 GFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVLEQGQCFIQVSK 1063
            GFKP TEPHLRG+L+ +R +QL  LREK+RIFV  GRWLMG LDEL VLEQGQCFIQVS 
Sbjct: 728  GFKPQTEPHLRGILTCVRASQLCGLREKARIFVPSGRWLMGVLDELGVLEQGQCFIQVSN 787

Query: 1062 PSIENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDCLV 883
            PS+ENCF KHGSRF  TK+N  VI+G VV+AKNPCLHPGD+R+L+AV+ PGL HL DCLV
Sbjct: 788  PSVENCFLKHGSRFAETKKNFEVIQGLVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLV 847

Query: 882  FPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRHSD 703
            FPQKG+RPHT+EASGSDLDGDLYFVTW++ LIPP K+SW PM+Y   E KE+ R+V H D
Sbjct: 848  FPQKGERPHTNEASGSDLDGDLYFVTWEDLLIPPGKKSWPPMQYDPGETKEIQREVNHKD 907

Query: 702  IIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVNMP 523
            IIDFF KNMVN+ LGTICNAHVVHAD+S+ GALDEKCI LAELAA AVDFPKTGKIV+MP
Sbjct: 908  IIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIHLAELAATAVDFPKTGKIVSMP 967

Query: 522  RNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSSELHIDPLLVPYDKDL 343
             NL+PKLYPDFMGKE++QSYKS KILG LYR I+D ++ D++ SSE+++D   + YD DL
Sbjct: 968  ANLKPKLYPDFMGKEEYQSYKSRKILGRLYRHIKDAYDEDLSESSEINLDSPDINYDTDL 1027

Query: 342  VVNETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMKER 163
             V  +AD+++DAW  K SYDRQL GLLGQY+V REEE+VTGHIWSMPK++++K  ++KE+
Sbjct: 1028 EVTGSADYIDDAWVKKCSYDRQLIGLLGQYKVKREEEVVTGHIWSMPKYNSRKLGDLKEK 1087

Query: 162  IEHAYSALRKEFRKVFDHLGAEFDQMSEEEKNVIYEKKASAWYQVTYHPVWVEK 1
            + H+Y ALRKEFR++F+ + +E +Q++E+++N +YE+KASAWYQVTYHP WVEK
Sbjct: 1088 LGHSYGALRKEFRQIFESMDSEIEQLNEDDRNELYERKASAWYQVTYHPKWVEK 1141


>gb|KVH99831.1| RNA-dependent RNA polymerase, eukaryotic-type [Cynara cardunculus
            var. scolymus]
          Length = 1373

 Score = 1484 bits (3843), Expect = 0.0
 Identities = 725/923 (78%), Positives = 807/923 (87%)
 Frame = -1

Query: 2769 QLASSPLIFYRTADDEIAITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVP 2590
            +L S+PLI YRTADD+IAITH S+MLDD DPWIRTTDFT SGAIGRC+TYR++IR RDV 
Sbjct: 404  KLVSAPLISYRTADDDIAITHXSEMLDDXDPWIRTTDFTPSGAIGRCHTYRVLIRXRDVX 463

Query: 2589 KAERALEFLEKQRVRIEHVKTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVM 2410
            KA++AL F  +Q V I+  +TK KV  EP FG P++   F I ++DDI+F  LFLVN+ +
Sbjct: 464  KAKKALAFXREQSVPIDQXRTKXKVQNEPEFGIPLRXPFFCIQYEDDISFXVLFLVNACL 523

Query: 2409 HRCIINQHQFTERVFDLLRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPK 2230
            HR IINQHQF+E+VFDLLR Q  E+NVAALKHI S  RH L +GFT L++VQ+W LNNP 
Sbjct: 524  HRGIINQHQFSEKVFDLLRDQSXEVNVAALKHICSX-RHPLYDGFTRLKIVQEWLLNNPM 582

Query: 2229 LLEKPLEQNDVIEVRRLIITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMET 2050
            L+EK +EQ D+ EVRRL+ITP+K YCLPPEVELSNRVLRHYR+VSDRFLRVTFMDEGM T
Sbjct: 583  LIEKKIEQKDITEVRRLVITPSKAYCLPPEVELSNRVLRHYRKVSDRFLRVTFMDEGMRT 642

Query: 2049 LNNHVLSFYPAPIVKDITSSFIAQKTTMFRRVKHILSQGIYVCGRRYFFLAFSANQLRDR 1870
            LNNHVL+FYPA IVK      IAQKTTMFRRV +ILS+G Y+CGR Y FLAFSANQLRDR
Sbjct: 643  LNNHVLNFYPAXIVK----GSIAQKTTMFRRVXNILSEGFYLCGRXYRFLAFSANQLRDR 698

Query: 1869 SAWFFAEDEKITCKQILSWMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDI 1690
            SAWFFAE+ KI+C+ I +WMGKF+N+N+AKCAARMGQCFSSTYATVEVPR EVDL L DI
Sbjct: 699  SAWFFAENXKISCRXIXAWMGKFSNRNVAKCAARMGQCFSSTYATVEVPRTEVDLBLXDI 758

Query: 1689 VRNDYVFSDGIGKMSPELALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKL 1510
             RN YVFSDGIGKMSPELALEVAEKLQL +NQPCAYQIRYAGCKGV+VWWP KKGDNIKL
Sbjct: 759  KRNGYVFSDGIGKMSPELALEVAEKLQLKDNQPCAYQIRYAGCKGVIVWWPGKKGDNIKL 818

Query: 1509 SLRPSMNKFESEHTILEICSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQ 1330
            SLRPSMNKFES HT+LEICSWTRLQPGFLNRQIITLLSAL V D+IFW+MQ KMV NL+Q
Sbjct: 819  SLRPSMNKFESXHTVLEICSWTRLQPGFLNRQIITLLSALNVGDDIFWEMQTKMVRNLBQ 878

Query: 1329 MLFDTDVAFDVITASCAESGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRI 1150
            ML DTD+AFDVIT SCAE G+ ASIMLAAGFKP TEPHLR MLSSIRVAQL+DLREKSRI
Sbjct: 879  MLEDTDMAFDVITTSCAEXGSXASIMLAAGFKPTTEPHLRXMLSSIRVAQLEDLREKSRI 938

Query: 1149 FVQDGRWLMGCLDELAVLEQGQCFIQVSKPSIENCFAKHGSRFLGTKRNLTVIEGYVVVA 970
            FV +GRWLMGCLDEL VLEQGQC+IQVS PS+ENCF KHGSRF  TKRNLTVI+G VV+A
Sbjct: 939  FVPEGRWLMGCLDELGVLEQGQCYIQVSNPSVENCFVKHGSRFSETKRNLTVIKGTVVIA 998

Query: 969  KNPCLHPGDVRVLKAVNVPGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHL 790
            KNPCLHPGDVRVL+AV+VPGLEHL DCL+FPQKGDRPHTDEASGSDLDGDLYFVTWD +L
Sbjct: 999  KNPCLHPGDVRVLEAVDVPGLEHLFDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDXNL 1058

Query: 789  IPPSKQSWLPMEYTAAEAKELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCG 610
            IPPSKQSW PMEYTAAEAK LPRD    DIIDFFTKNMVND LGTICNAHVVHADMSD G
Sbjct: 1059 IPPSKQSWPPMEYTAAEAKLLPRD----DIIDFFTKNMVNDSLGTICNAHVVHADMSDDG 1114

Query: 609  ALDEKCIKLAELAAIAVDFPKTGKIVNMPRNLRPKLYPDFMGKEDFQSYKSNKILGELYR 430
            AL++KCIKLAELAA AVDFPKTGKIVNMP  LRPKLYPDFMGKE FQSYKS KILG+LYR
Sbjct: 1115 ALEKKCIKLAELAATAVDFPKTGKIVNMPPALRPKLYPDFMGKESFQSYKSKKILGKLYR 1174

Query: 429  QIEDCFNTDITPSSELHIDPLLVPYDKDLVVNETADFVNDAWSCKLSYDRQLNGLLGQYQ 250
             ++DC  TD+TPSSEL I P  +PYD+DL V E A FVNDAW CKLSYDR+LNGLLGQY+
Sbjct: 1175 HVKDCRATDVTPSSELLILPSXIPYDEDLEVREAASFVNDAWGCKLSYDRRLNGLLGQYK 1234

Query: 249  VSREEEIVTGHIWSMPKHSNKKQREMKERIEHAYSALRKEFRKVFDHLGAEFDQMSEEEK 70
            V+REEEIVTGHIWSMPKH++KKQ E+KERI+HAYSALRKEFRKVFD+LG +FDQ+ EEE+
Sbjct: 1235 VAREEEIVTGHIWSMPKHASKKQGELKERIKHAYSALRKEFRKVFDYLGPDFDQIPEEER 1294

Query: 69   NVIYEKKASAWYQVTYHPVWVEK 1
            N  YE+KASAWYQVTYHP+WV K
Sbjct: 1295 NERYERKASAWYQVTYHPIWVRK 1317



 Score =  397 bits (1020), Expect = e-114
 Identities = 194/302 (64%), Positives = 239/302 (79%)
 Frame = -1

Query: 3081 MNQRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETP 2902
            MNQRR  ++P +  NV+LE G+ +  DNF+VGWRG  SGVDFL+DPFDYSCKFLFTK+  
Sbjct: 1    MNQRRRTKVPFKFSNVVLEIGMFASRDNFLVGWRGPASGVDFLIDPFDYSCKFLFTKDNA 60

Query: 2901 FSFKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDE 2722
            FSFKGTKNHAVIKCNFKVEFL R+VN IK+         +VL+FQL S+PLI YRTADD+
Sbjct: 61   FSFKGTKNHAVIKCNFKVEFLAREVNDIKDC----LQSHRVLIFQLVSAPLISYRTADDD 116

Query: 2721 IAITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRI 2542
            IAITH S+MLDD DPWIRTTDFT SGAIGRC+TYR++IR RDV KA++AL F  +Q V I
Sbjct: 117  IAITHSSEMLDDVDPWIRTTDFTPSGAIGRCHTYRVLIRSRDVRKAKKALAFFREQSVPI 176

Query: 2541 EHVKTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFD 2362
            + ++TK KV  EP FG P++   F I ++DDI+F+ LFLVN+ +HR IINQHQF+E+VFD
Sbjct: 177  DQLRTKPKVQNEPEFGIPLRYPFFCIQYEDDISFRVLFLVNACLHRGIINQHQFSEKVFD 236

Query: 2361 LLRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRR 2182
            LLR Q  E+NVAALKHI S +RH L +GFT L++VQ+W LNNP L+EK +EQ D+ EVRR
Sbjct: 237  LLRDQSVEVNVAALKHICS-HRHPLYDGFTRLKIVQEWLLNNPMLIEKKIEQKDITEVRR 295

Query: 2181 LI 2176
            L+
Sbjct: 296  LM 297



 Score =  115 bits (289), Expect = 3e-22
 Identities = 55/81 (67%), Positives = 62/81 (76%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYDADLDQIKKVNDYEKV 3214
            VSVGGF + V AK LLDY  E  G VWRCRVK SSTPPDTYP +DA+L+ I+KV+DYEKV
Sbjct: 311  VSVGGFGDHVKAKMLLDYLEETVGRVWRCRVKASSTPPDTYPXFDABLENIQKVDDYEKV 370

Query: 3213 KPHAFVQFVVPDQVNMVLEAE 3151
            +PHAFV FV  D VN  LE E
Sbjct: 371  EPHAFVHFVDXDSVNSXLEIE 391


>ref|XP_012071453.1| RNA-dependent RNA polymerase 6 isoform X1 [Jatropha curcas]
 ref|XP_020534693.1| RNA-dependent RNA polymerase 6 isoform X2 [Jatropha curcas]
 gb|KDP38635.1| hypothetical protein JCGZ_03988 [Jatropha curcas]
          Length = 1198

 Score = 1484 bits (3841), Expect = 0.0
 Identities = 718/1133 (63%), Positives = 880/1133 (77%), Gaps = 2/1133 (0%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYD-ADLDQIKKVNDYEK 3217
            VS GGF+N V AK+L+ Y  E  G VWRCR+K S TPP++YP +   D   I + N+Y++
Sbjct: 15   VSFGGFENHVNAKDLVAYLEEVIGQVWRCRLKTSWTPPESYPNFKITDTAGIHRTNEYKR 74

Query: 3216 VKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIEN 3037
            V+PHAFV F + +       A                 GPENP+ +NQRR + +P ++ +
Sbjct: 75   VEPHAFVHFALAESATWAKNAAGRCELFLNDRPLKVSLGPENPFTLNQRRRKTIPSKLSD 134

Query: 3036 VILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCN 2857
            V +E G++   D F+VGWRG  SGVDFLVDPFD +CKF FT++T FS K T  HAVI+C+
Sbjct: 135  VCIEIGMMVSRDEFLVGWRGPPSGVDFLVDPFDGTCKFCFTRDTAFSIKDTNKHAVIRCD 194

Query: 2856 FKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIAITHPSQMLDDDDP 2677
            FK+EFLVRD+N IK+Y    Y    V++ QLAS+P ++YRTADD+I +  P  +LDDDDP
Sbjct: 195  FKLEFLVRDINEIKQYKDTSY---LVILLQLASAPWVWYRTADDDIEVLVPFNLLDDDDP 251

Query: 2676 WIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRIEHVKTKLKVLEEPGF 2497
            WIRTTDFT SGAIGRCN+YR+ I  R   K ERA+ +L+++RV+++ ++  LK+L EP +
Sbjct: 252  WIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLERAINYLKERRVQVDSLRRPLKILNEPDY 311

Query: 2496 GTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAALK 2317
            G PM D  F IH K+ I F+ +FLVN+VMH+ I NQHQ ++  FDLLR QP +INVAALK
Sbjct: 312  GMPMSDPFFCIHRKEGIAFEIVFLVNAVMHKGIFNQHQLSDDFFDLLRNQPADINVAALK 371

Query: 2316 HIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPPEV 2137
            HI SY R    +    L+ VQ+W L NPKL + P + +D++++RRL ITPT+ YCLPPE+
Sbjct: 372  HICSYKRPVF-DAHRRLKAVQEWLLKNPKLFKCPKQLDDIVQIRRLAITPTRAYCLPPEI 430

Query: 2136 ELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMFRR 1957
            ELSNRVLR Y+  +DRFLRVTFMDEG++T+N + L++Y APIV+DITS+  +QKT +F+R
Sbjct: 431  ELSNRVLRKYKNFADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTSFSQKTRIFKR 490

Query: 1956 VKHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIAKC 1777
            VK IL+ G Y+CGRRY FLAFS+NQLRDRSAWFFAED KI   QI  WMGKF NKNIAKC
Sbjct: 491  VKSILTDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDGKIRVDQIRKWMGKFTNKNIAKC 550

Query: 1776 AARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLTEN 1597
            AARMGQCFSSTYATVEVP  EV+L   DI RN Y FSDGIG ++P+LA  VAEKL+L  N
Sbjct: 551  AARMGQCFSSTYATVEVPSAEVNLAHPDIERNGYTFSDGIGMITPDLAKAVAEKLKLDIN 610

Query: 1596 QPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFLNR 1417
             PCAYQIRYAGCKGVV  WP  +GD I+LSLRPSMNKF+S HT LEICSWTR QPGFLNR
Sbjct: 611  PPCAYQIRYAGCKGVVACWP-AQGDGIRLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNR 669

Query: 1416 QIITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAAGF 1237
            QIITLLS L V DEIFW MQ+ MV  LN+ML D DVAFDVITASC E GNTA++ML+AGF
Sbjct: 670  QIITLLSTLNVSDEIFWKMQIAMVSKLNKMLTDADVAFDVITASCTEQGNTAALMLSAGF 729

Query: 1236 KPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVLEQGQCFIQVSKPS 1057
            KP  EPHLRGML+ IR AQ  DLREK+RIFV  GRWLMGCLDEL VLEQGQCFIQVS PS
Sbjct: 730  KPQNEPHLRGMLTCIRAAQFCDLREKARIFVSSGRWLMGCLDELGVLEQGQCFIQVSNPS 789

Query: 1056 IENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDCLVFP 877
            +E CF+KHGSRF  TK+NL VI G VV+AKNPCLHPGDVR+L+AV+ PGL HL DCLVFP
Sbjct: 790  LETCFSKHGSRFSETKKNLQVITGTVVIAKNPCLHPGDVRILEAVDAPGLCHLHDCLVFP 849

Query: 876  QKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRHSDII 697
            QKGDRPHT+EASGSDLDGDLYFVTWDE+LIPPSKQSW PM+Y AAE K L R V H DII
Sbjct: 850  QKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKQSWTPMQYDAAEPKLLSRPVSHQDII 909

Query: 696  DFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVNMPRN 517
            DFF KNMVN+ LG ICNAHVV AD+S+ GALDE CIKLAELAA AVDFPKTGK+V +P+ 
Sbjct: 910  DFFAKNMVNESLGAICNAHVVRADLSEYGALDENCIKLAELAATAVDFPKTGKLVTLPQY 969

Query: 516  LRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCF-NTDITPSSELHIDPLLVPYDKDLV 340
            L+PK+YPDFMGKE++QSYKS KILG LYR I+D + + D   SSEL+     +PYD +L 
Sbjct: 970  LKPKMYPDFMGKEEYQSYKSTKILGRLYRDIKDAYGDDDAAASSELNCSSGDIPYDTNLE 1029

Query: 339  VNETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMKERI 160
            V  +AD++ +AW  K SYD QL GLLGQY+V +EEE+VTGHIWSMP ++++K  E+KER+
Sbjct: 1030 VLGSADYILEAWDQKCSYDGQLKGLLGQYKVKKEEELVTGHIWSMPMYNSRKLGELKERL 1089

Query: 159  EHAYSALRKEFRKVFDHLGAEFDQMSEEEKNVIYEKKASAWYQVTYHPVWVEK 1
            +H+YSAL+KEFR+VF+ +  +F+Q++++EKN++YE+KASAWYQVTYHP W++K
Sbjct: 1090 KHSYSALKKEFRQVFEKMDLDFEQLTDDEKNLLYERKASAWYQVTYHPKWIKK 1142


>ref|XP_019260524.1| PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana attenuata]
 gb|OIT39130.1| rna-dependent rna polymerase 6 [Nicotiana attenuata]
          Length = 1197

 Score = 1483 bits (3839), Expect = 0.0
 Identities = 719/1133 (63%), Positives = 892/1133 (78%), Gaps = 2/1133 (0%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYDADLDQIKKVNDYEKV 3214
            +SVGGFDN+V AK L +Y  E  G VWRCR+K SSTPPD+YP +D D ++++++ DYEKV
Sbjct: 15   ISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTFDVDAERVQRMKDYEKV 74

Query: 3213 KPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIENV 3034
             PHAFV F   +     L A                 GPENPYR+NQRR   MP +  +V
Sbjct: 75   VPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLNQRRRTTMPFKFSDV 134

Query: 3033 ILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCNF 2854
             +E G+L   D+FVVGWRG ++GVDFLVDPF+ +CK LFTK+T FSF+G   HA+IKCNF
Sbjct: 135  SIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGACKILFTKDTAFSFRGEARHAIIKCNF 194

Query: 2853 KVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIAITHPSQMLDDDDPW 2674
            K+EFLVR++N IK+   K++    V++ QLASSPL+FYRTADD+I  +    +LDDDD W
Sbjct: 195  KIEFLVREINEIKK--CKDFTS-LVILLQLASSPLVFYRTADDDIEESVAFDLLDDDDQW 251

Query: 2673 IRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRIEHV--KTKLKVLEEPG 2500
            IRTTD T SGAIGRCNTYRI IR R+ P  E+A+ +    RV +  +  +  L+V +EP 
Sbjct: 252  IRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCNRKMLRVRDEPD 311

Query: 2499 FGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAAL 2320
            FG  M D  F   + + I+FK +FLVN+V+H+ I+NQHQ T   F LLR   EE+N+AAL
Sbjct: 312  FGVSMSDPFFCFQN-EGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSHQEEVNLAAL 370

Query: 2319 KHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPPE 2140
            KH++SY +  + +    L  ++KW L NPKLLE+  E +D++EVRRL+ITPTK YCLPP 
Sbjct: 371  KHMFSY-KWPVNDAIQKLVGIRKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPT 429

Query: 2139 VELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMFR 1960
            VELSNRVLR+Y+ V+DRFLRVTFMDEGM  LN +VL++Y A IV++ITS+   Q+T +F+
Sbjct: 430  VELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQ 489

Query: 1959 RVKHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIAK 1780
            RVK ILS+G ++CGR+Y FLAFSANQLRDRSAWFFAED KI    I+SWMG+F+N+N+AK
Sbjct: 490  RVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAK 549

Query: 1779 CAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLTE 1600
            CAARMGQCFSSTYATVEVP +EV+ +L DI RN YVFSDGIG +S +LA+EVAEKL L+ 
Sbjct: 550  CAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAVEVAEKLHLSV 609

Query: 1599 NQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFLN 1420
            N P AYQIRYAGCKGVV  WP K  D I+LSLRPSM KF+S HTILEICSWTR QPGFLN
Sbjct: 610  NPPSAYQIRYAGCKGVVACWPTKN-DGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLN 668

Query: 1419 RQIITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAAG 1240
            RQI+TLLS+L+VKD IFW+MQ +M+  L++ML D+DVAFDVITASCAE+GNTA+IML+AG
Sbjct: 669  RQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAAIMLSAG 728

Query: 1239 FKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVLEQGQCFIQVSKP 1060
            FKP +EPHLRGMLSSIR +QL DLR K+RIFV  GRWLMGCLDEL  LEQGQCFIQVS P
Sbjct: 729  FKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSP 788

Query: 1059 SIENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDCLVF 880
            S+ENCF KHG +F   K+NL V++G VV+AKNPCLHPGDVR+L+AV+VPGL HL DCLVF
Sbjct: 789  SLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVF 848

Query: 879  PQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRHSDI 700
            PQKGDRPH++EASGSDLDGDLYFVTWDE+LIPPSK+SW+PM Y  AE K++ R V H DI
Sbjct: 849  PQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQMGRQVNHMDI 908

Query: 699  IDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVNMPR 520
            IDFF+KNMV + LG ICNAHVVHAD+S+ GALDEKC+KLAELAA+AVDFPKTGK+V MP 
Sbjct: 909  IDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPF 968

Query: 519  NLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSSELHIDPLLVPYDKDLV 340
            +L+PK+YPDFMGKE+FQSYKS KILG+LYRQ++D  +T+   S+ L + P  +PYD  L 
Sbjct: 969  DLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPNDIPYDSSLE 1028

Query: 339  VNETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMKERI 160
            +  +  F++DAW+ K SYD QL+GLLGQY+V+REEE+VTGHIWSMPK+S KKQ E+KER+
Sbjct: 1029 IPGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERL 1088

Query: 159  EHAYSALRKEFRKVFDHLGAEFDQMSEEEKNVIYEKKASAWYQVTYHPVWVEK 1
            +HAY+ LRKEFR VF+ +  +FD + ++EKN +YE+KASAWYQVTY+P WV +
Sbjct: 1089 KHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVAR 1141


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score = 1483 bits (3839), Expect = 0.0
 Identities = 719/1133 (63%), Positives = 892/1133 (78%), Gaps = 2/1133 (0%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYDADLDQIKKVNDYEKV 3214
            +SVGGFDN+V AK L +Y  E  G VWRCR+K SSTPPD+YP +D D ++++++ DYEKV
Sbjct: 15   ISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTFDVDAERVQRMKDYEKV 74

Query: 3213 KPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIENV 3034
             PHAFV F   +     L A                 GPENPYR+NQRR   MP +  +V
Sbjct: 75   VPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLNQRRRTTMPFKFSDV 134

Query: 3033 ILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCNF 2854
             +E G+L   D+FVVGWRG ++GVDFLVDPF+ +CK LFTK+T FSF+G   HA+IKCNF
Sbjct: 135  SIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGACKILFTKDTAFSFRGEARHAIIKCNF 194

Query: 2853 KVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIAITHPSQMLDDDDPW 2674
            K+EFLVR++N IK+   K++    V++ QLASSPL+FYRTADD+I  +    +LDDDD W
Sbjct: 195  KIEFLVREINEIKK--CKDFTS-LVILLQLASSPLVFYRTADDDIEESVAFDLLDDDDQW 251

Query: 2673 IRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRIEHV--KTKLKVLEEPG 2500
            IRTTD T SGAIGRCNTYRI IR R+ P  E+A+ +    RV +  +  +  L+V +EP 
Sbjct: 252  IRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCNRKMLRVRDEPD 311

Query: 2499 FGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAAL 2320
            FG  M D  F   + + I+FK +FLVN+V+H+ I+NQHQ T   F LLR   EE+N+AAL
Sbjct: 312  FGVSMSDPFFCFQN-EGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSHQEEVNLAAL 370

Query: 2319 KHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPPE 2140
            KH++SY +  + +    L  ++KW L NPKLLE+  E +D++EVRRL+ITPTK YCLPP 
Sbjct: 371  KHMFSY-KWPVNDAIQKLVGIRKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPT 429

Query: 2139 VELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMFR 1960
            VELSNRVLR+Y+ V+DRFLRVTFMDEGM  LN +VL++Y A IV++ITS+   Q+T +F+
Sbjct: 430  VELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQ 489

Query: 1959 RVKHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIAK 1780
            RVK ILS+G ++CGR+Y FLAFSANQLRDRSAWFFAED KI    I+SWMG+F+N+N+AK
Sbjct: 490  RVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAK 549

Query: 1779 CAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLTE 1600
            CAARMGQCFSSTYATVEVP +EV+ +L DI RN YVFSDGIG +S +LA+EVAEKL L+ 
Sbjct: 550  CAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAVEVAEKLHLSV 609

Query: 1599 NQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFLN 1420
            N P AYQIRYAGCKGVV  WP K  D I+LSLRPSM KF+S HTILEICSWTR QPGFLN
Sbjct: 610  NPPSAYQIRYAGCKGVVACWPTKN-DGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLN 668

Query: 1419 RQIITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAAG 1240
            RQI+TLLS+L+VKD IFW+MQ +M+  L++ML D+DVAFDVITASCAE+GNTA+IML+AG
Sbjct: 669  RQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAAIMLSAG 728

Query: 1239 FKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVLEQGQCFIQVSKP 1060
            FKP +EPHLRGMLSSIR +QL DLR K+RIFV  GRWLMGCLDEL  LEQGQCFIQVS P
Sbjct: 729  FKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSP 788

Query: 1059 SIENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDCLVF 880
            S+ENCF KHG +F   K+NL V++G VV+AKNPCLHPGDVR+L+AV+VPGL HL DCLVF
Sbjct: 789  SLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVF 848

Query: 879  PQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRHSDI 700
            PQKGDRPH++EASGSDLDGDLYFVTWDE+LIPPSK+SW+PM Y  AE K++ R V H DI
Sbjct: 849  PQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQMGRQVNHMDI 908

Query: 699  IDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVNMPR 520
            IDFF+KNMV + LG ICNAHVVHAD+S+ GALDEKC+KLAELAA+AVDFPKTGK+V MP 
Sbjct: 909  IDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPF 968

Query: 519  NLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSSELHIDPLLVPYDKDLV 340
            +L+PK+YPDFMGKE+FQSYKS KILG+LYRQ++D  +T+   S+ L + P  +PYD  L 
Sbjct: 969  DLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPNDIPYDSSLE 1028

Query: 339  VNETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMKERI 160
            +  +  F++DAW+ K SYD QL+GLLGQY+V+REEE+VTGHIWSMPK+S KKQ E+KER+
Sbjct: 1029 IPGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERL 1088

Query: 159  EHAYSALRKEFRKVFDHLGAEFDQMSEEEKNVIYEKKASAWYQVTYHPVWVEK 1
            +HAY+ LRKEFR VF+ +  +FD + ++EKN +YE+KASAWYQVTY+P WV +
Sbjct: 1089 KHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVAR 1141


>ref|XP_021276585.1| RNA-dependent RNA polymerase 6 [Herrania umbratica]
          Length = 1197

 Score = 1482 bits (3837), Expect = 0.0
 Identities = 710/1134 (62%), Positives = 890/1134 (78%), Gaps = 3/1134 (0%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYDA-DLDQIKKVNDYEK 3217
            VSVGGF   VTAK+L++Y     GVVWRCR+K S TPP++YP ++  D   I++ +DY+K
Sbjct: 15   VSVGGFGRHVTAKDLMEYLDNEVGVVWRCRLKTSWTPPESYPNFEILDSTVIQRTDDYKK 74

Query: 3216 VKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIEN 3037
            V+PHAFV F  P  V   ++A                 GPENPY +N+RR    P ++ +
Sbjct: 75   VEPHAFVHFASPLTVTWAVDAAGRTELVFNNQLLKVSLGPENPYYLNRRRRNTTPFKLSD 134

Query: 3036 VILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCN 2857
            V L+ G +   D F VGWRG   GVDFLVDPFD +CKF F+++T FSFKGT  +AVIKC+
Sbjct: 135  VCLDIGGMVSQDEFFVGWRGPPFGVDFLVDPFDGTCKFCFSRDTAFSFKGTTEYAVIKCD 194

Query: 2856 FKVEFLVRDVNVIKEYDVKEYDDPKVLV--FQLASSPLIFYRTADDEIAITHPSQMLDDD 2683
            FKVEFLVRD+N     ++K+Y +P  LV   QLASSP ++YRTADDEI  + P  +LDDD
Sbjct: 195  FKVEFLVRDIN-----EIKQYTEPSGLVVFLQLASSPWVWYRTADDEIEESVPFDLLDDD 249

Query: 2682 DPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRIEHVKTKLKVLEEP 2503
            D WIRTTDFT SGAIGRCNTYR++IR R   K ++AL++L +QRV  ++V+  L++ +EP
Sbjct: 250  DQWIRTTDFTPSGAIGRCNTYRVVIRPRHGAKLKKALDYLREQRVPPDYVRWPLRIRDEP 309

Query: 2502 GFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAA 2323
             FG  M D  + I++K+ I F+ +FLVN+VMH+ I  QHQ +E  F+LLR QP E+NVAA
Sbjct: 310  DFGMSMSDPFYCINYKEGIPFEIMFLVNAVMHKGIFYQHQLSEDFFNLLRDQPREVNVAA 369

Query: 2322 LKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPP 2143
            LKHIYSY R    + +  L+ V  W L NPKL + P + +D++E+RRL+ITPTK YCL P
Sbjct: 370  LKHIYSYRRPVF-DAYKRLKTVHDWLLRNPKLFKSPKQLDDIVEIRRLVITPTKAYCLLP 428

Query: 2142 EVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMF 1963
            EVELSNRVLR Y+EV+DRFLRVTFMDEGM+T+N +VL++Y A IV+D+TS+  +QKT +F
Sbjct: 429  EVELSNRVLRKYKEVADRFLRVTFMDEGMQTINANVLTYYAASIVRDVTSTSFSQKTGVF 488

Query: 1962 RRVKHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIA 1783
            +RV+ IL+ G Y+CGR+Y FLAFSANQLRDRSAWFFAED K +  QIL WMGKF N+NIA
Sbjct: 489  KRVRSILTDGFYLCGRKYSFLAFSANQLRDRSAWFFAEDGKTSVLQILRWMGKFTNRNIA 548

Query: 1782 KCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLT 1603
            KCAARMGQCFSSTYATVEVP  EVD  L DI RN Y+FSDGIGK++P+LA+EVA+KL+L 
Sbjct: 549  KCAARMGQCFSSTYATVEVPSTEVDPCLPDIERNGYLFSDGIGKITPDLAMEVAQKLKLD 608

Query: 1602 ENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFL 1423
             N PCAYQIRYAGCKGVV  WP++ GD ++LSLRPSMNKF S HT LEICSWTR QPGFL
Sbjct: 609  LNPPCAYQIRYAGCKGVVACWPEE-GDGVRLSLRPSMNKFCSNHTTLEICSWTRFQPGFL 667

Query: 1422 NRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAA 1243
            NRQIITLLS L V D++FW+MQ  MV  LN++L D D AF+V+T+SCAE GNTA+IML+A
Sbjct: 668  NRQIITLLSTLHVPDDVFWEMQNTMVSKLNKILVDADAAFEVLTSSCAEQGNTAAIMLSA 727

Query: 1242 GFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVLEQGQCFIQVSK 1063
            GFKP  EPHLRG+L+ +R +QL  LREK+RIFV  GRWLMG  DEL VLEQGQCFIQV+ 
Sbjct: 728  GFKPQIEPHLRGILTCVRASQLSGLREKARIFVPSGRWLMGVFDELGVLEQGQCFIQVAN 787

Query: 1062 PSIENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDCLV 883
            PS+ENCF KHGSRF  TK+N  VI+G VV+AKNPCLHPGD+R+L+AV+ PGL HL DCLV
Sbjct: 788  PSVENCFLKHGSRFAETKKNFEVIQGLVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLV 847

Query: 882  FPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRHSD 703
            FPQKG+RPHT+EASGSDLDGDLYFVTW++ LIPP K+SW PM+Y   E K+L R+V H D
Sbjct: 848  FPQKGERPHTNEASGSDLDGDLYFVTWEDLLIPPGKKSWPPMQYDPGEPKQLQREVNHKD 907

Query: 702  IIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVNMP 523
            IIDFF KNMVN+ LGTICNAHVVHAD+S+ GALDEKCI LAELAA AVDFPKTG+IV+MP
Sbjct: 908  IIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIHLAELAATAVDFPKTGRIVSMP 967

Query: 522  RNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSSELHIDPLLVPYDKDL 343
             NL+PKLYPDFMGKE++QSYKS KILG LYR I+D ++ D++ SS+++++   + YD DL
Sbjct: 968  ANLKPKLYPDFMGKEEYQSYKSRKILGRLYRHIKDAYDEDLSESSKINLEAPDINYDTDL 1027

Query: 342  VVNETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMKER 163
             +  +AD+++DAW  K SYD QL GLLGQY+V REEE+VTGHIWSMPK++++K  ++KE+
Sbjct: 1028 EITGSADYIDDAWVKKCSYDGQLIGLLGQYKVKREEEVVTGHIWSMPKYTSRKLGDLKEK 1087

Query: 162  IEHAYSALRKEFRKVFDHLGAEFDQMSEEEKNVIYEKKASAWYQVTYHPVWVEK 1
            + H+Y ALRKEFR++F+ + +E +Q++E+E+N +YE+KASAWYQVTYHP WVEK
Sbjct: 1088 LGHSYGALRKEFRQIFESMDSEIEQLNEDERNELYERKASAWYQVTYHPKWVEK 1141


>ref|XP_021670990.1| RNA-dependent RNA polymerase 6-like [Hevea brasiliensis]
 ref|XP_021670991.1| RNA-dependent RNA polymerase 6-like [Hevea brasiliensis]
          Length = 1199

 Score = 1482 bits (3836), Expect = 0.0
 Identities = 712/1133 (62%), Positives = 882/1133 (77%), Gaps = 2/1133 (0%)
 Frame = -1

Query: 3393 VSVGGFDNEVTAKELLDYFHENFGVVWRCRVKKSSTPPDTYPEYD-ADLDQIKKVNDYEK 3217
            VS GGFD  + AK+L+ Y     G+VWRCR+K S TPP++YP ++  +   +++   +++
Sbjct: 15   VSFGGFDIHIKAKDLVAYLESEIGLVWRCRLKTSWTPPESYPNFEITNTADVQRTEGHKR 74

Query: 3216 VKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXGPENPYRMNQRREEEMPIRIEN 3037
            ++PHAFV F  P+       A                 GPENPY MNQRR    P ++ +
Sbjct: 75   IEPHAFVHFASPESATWAKNAAGRCELFLNDRPLKVSLGPENPYHMNQRRRTTTPFKLSD 134

Query: 3036 VILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFSFKGTKNHAVIKCN 2857
              +E G +   + F+V WRG  SGVDFLVDPFD +CKF FT++T FS K T  HAVI+C+
Sbjct: 135  ARIEIGTVCR-NEFLVAWRGPSSGVDFLVDPFDGTCKFCFTRDTAFSLKDTTEHAVIRCD 193

Query: 2856 FKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIAITHPSQMLDDDDP 2677
            FK+EFLVRD+N +K+Y         V++ QLAS+P + YRTADD+I +  P  +LDDDDP
Sbjct: 194  FKLEFLVRDINEVKQY-TDWSTSSLVILLQLASAPCVCYRTADDDIEVLVPFDLLDDDDP 252

Query: 2676 WIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVRIEHVKTKLKVLEEPGF 2497
            WIRTTDFT SGAIGRCN+YR+ I  R   K  RAL +L ++RV++E +K  LK+  EP +
Sbjct: 253  WIRTTDFTASGAIGRCNSYRVSIPPRHGAKLNRALRYLGERRVQLEFLKLPLKISNEPDY 312

Query: 2496 GTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLLRGQPEEINVAALK 2317
            G PM D  F IHHK+ I F  +FLVN+VMH+ I NQHQ ++  FDLLR QP ++N+ ALK
Sbjct: 313  GMPMSDTFFCIHHKEGIAFDVMFLVNAVMHKGIFNQHQLSDSFFDLLRSQPVDVNLVALK 372

Query: 2316 HIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLIITPTKGYCLPPEV 2137
            HI SY R  + +   SL+ VQ W LNNPKL  +P + +D++E+RRL ITPTK YCLPPEV
Sbjct: 373  HICSYKRPVI-DASISLKAVQLWLLNNPKLFNRPKQLDDIVEIRRLAITPTKAYCLPPEV 431

Query: 2136 ELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDITSSFIAQKTTMFRR 1957
            ELSNRVLR Y++++DRFLRVTFMDEG++T+N + L++Y APIV+DITS+  +QKT +F+R
Sbjct: 432  ELSNRVLRKYKDIADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSNSFSQKTRVFKR 491

Query: 1956 VKHILSQGIYVCGRRYFFLAFSANQLRDRSAWFFAEDEKITCKQILSWMGKFNNKNIAKC 1777
            VK IL+ G Y+CGRRY FLAFS+NQLRDRSAWFFAE+ +I+ +QI +WMG+F N+NIAKC
Sbjct: 492  VKGILTDGFYLCGRRYSFLAFSSNQLRDRSAWFFAENGEISVQQIRNWMGRFTNRNIAKC 551

Query: 1776 AARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPELALEVAEKLQLTEN 1597
            AARMGQCFSSTYATVEVP  E DL L DI RN Y+FSDGIG ++P+LA EVAEKL+L  N
Sbjct: 552  AARMGQCFSSTYATVEVPSGEADLSLPDIERNGYIFSDGIGIITPDLAKEVAEKLKLDAN 611

Query: 1596 QPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEICSWTRLQPGFLNR 1417
             PCAYQIRYAGCKGVV  WP  +GD I+LSLRPSM+KF S HT LEICSWTR QPGFLNR
Sbjct: 612  PPCAYQIRYAGCKGVVACWP-AQGDGIRLSLRPSMDKFHSNHTTLEICSWTRFQPGFLNR 670

Query: 1416 QIITLLSALEVKDEIFWDMQMKMVMNLNQMLFDTDVAFDVITASCAESGNTASIMLAAGF 1237
            QIITLLS L+V DEIFW MQ+ MV  L+QML D DVAFDVITASCAE GNTA+IML+AGF
Sbjct: 671  QIITLLSVLKVPDEIFWKMQIAMVSKLDQMLMDADVAFDVITASCAEQGNTAAIMLSAGF 730

Query: 1236 KPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVLEQGQCFIQVSKPS 1057
            KP  EPHLRGML+ IR AQL  LREK+RIFV  GRWLMGCLDEL VLEQGQCFIQVS PS
Sbjct: 731  KPQKEPHLRGMLTCIRAAQLWGLREKARIFVHSGRWLMGCLDELGVLEQGQCFIQVSNPS 790

Query: 1056 IENCFAKHGSRFLGTKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNVPGLEHLVDCLVFP 877
            +ENCF KHGSRF   K+NL VI+G VV+AKNPCLHPGD+R+L+AV+ PGL HL DCLVFP
Sbjct: 791  LENCFLKHGSRFSEAKKNLQVIKGTVVIAKNPCLHPGDIRILEAVDAPGLHHLHDCLVFP 850

Query: 876  QKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEAKELPRDVRHSDII 697
            QKGDRPHT+EASGSDLDGDLYFVTWDE+L+PPSK+SW PM+Y AAEAK L R VR  DII
Sbjct: 851  QKGDRPHTNEASGSDLDGDLYFVTWDENLLPPSKKSWTPMQYDAAEAKLLHRPVRSQDII 910

Query: 696  DFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVDFPKTGKIVNMPRN 517
            DFF K+MVN+ LG ICNAHVVHAD+S+ GALDE CIKLAELAA AVDFPKTGK+V MP +
Sbjct: 911  DFFAKHMVNENLGAICNAHVVHADLSEHGALDENCIKLAELAATAVDFPKTGKLVTMPHS 970

Query: 516  LRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDI-TPSSELHIDPLLVPYDKDLV 340
            L+PK+YPDFMGKED+QSYKS KILG LYRQ++D ++ ++ + SSEL+I P  +PYD+DL 
Sbjct: 971  LKPKMYPDFMGKEDYQSYKSTKILGRLYRQVKDAYDDNVESASSELNIVPGDIPYDRDLE 1030

Query: 339  VNETADFVNDAWSCKLSYDRQLNGLLGQYQVSREEEIVTGHIWSMPKHSNKKQREMKERI 160
            V  ++D++ DAW  K SYD QL GL+GQY+V REEE+VTGHIWSMPK++++K  E+KER+
Sbjct: 1031 VFGSSDYILDAWDQKCSYDGQLKGLMGQYKVRREEEVVTGHIWSMPKYNSRKNGELKERL 1090

Query: 159  EHAYSALRKEFRKVFDHLGAEFDQMSEEEKNVIYEKKASAWYQVTYHPVWVEK 1
            + +YS L+KEFR+VF+ +  +F+Q+ ++EKN++YE+KASAWYQV YHP W+ K
Sbjct: 1091 KQSYSGLKKEFRQVFEKMDLDFEQLPDDEKNLLYERKASAWYQVAYHPSWINK 1143