BLASTX nr result

ID: Chrysanthemum22_contig00010618 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00010618
         (411 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY62728.1| hypothetical protein LSAT_6X39840 [Lactuca sativa]      64   3e-09
ref|XP_023748369.1| DNA polymerase epsilon catalytic subunit A-l...    64   3e-09
ref|XP_022038158.1| DNA polymerase epsilon catalytic subunit A [...    64   6e-09
gb|PLY90544.1| hypothetical protein LSAT_6X39380 [Lactuca sativa]      58   6e-07
ref|XP_023756876.1| DNA polymerase epsilon catalytic subunit A-l...    58   6e-07

>gb|PLY62728.1| hypothetical protein LSAT_6X39840 [Lactuca sativa]
          Length = 2148

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 37/71 (52%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
 Frame = -1

Query: 336  MDQKKKTTRDGEPMLPKTQMDQLDNLDFS-QRNGVAEIHSSVANKRKAQGNE-VGSFFKK 163
            +DQ+K   R  + +  K +  +LDNLD + QRNGVAEIHS V++KR+AQG   V S+F++
Sbjct: 1198 LDQRK---RKWKQVREKRKKQKLDNLDKNTQRNGVAEIHSGVSDKRQAQGRTGVNSYFER 1254

Query: 162  *ELALTSNHWQ 130
             ELALT +HWQ
Sbjct: 1255 HELALTRSHWQ 1265


>ref|XP_023748369.1| DNA polymerase epsilon catalytic subunit A-like [Lactuca sativa]
          Length = 2183

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 37/71 (52%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
 Frame = -1

Query: 336  MDQKKKTTRDGEPMLPKTQMDQLDNLDFS-QRNGVAEIHSSVANKRKAQGNE-VGSFFKK 163
            +DQ+K   R  + +  K +  +LDNLD + QRNGVAEIHS V++KR+AQG   V S+F++
Sbjct: 1233 LDQRK---RKWKQVREKRKKQKLDNLDKNTQRNGVAEIHSGVSDKRQAQGRTGVNSYFER 1289

Query: 162  *ELALTSNHWQ 130
             ELALT +HWQ
Sbjct: 1290 HELALTRSHWQ 1300


>ref|XP_022038158.1| DNA polymerase epsilon catalytic subunit A [Helianthus annuus]
 gb|OTG25206.1| putative DNA polymerase epsilon catalytic subunit [Helianthus annuus]
          Length = 2165

 Score = 63.5 bits (153), Expect = 6e-09
 Identities = 32/69 (46%), Positives = 46/69 (66%)
 Frame = -1

Query: 336  MDQKKKTTRDGEPMLPKTQMDQLDNLDFSQRNGVAEIHSSVANKRKAQGNEVGSFFKK*E 157
            +D KK+  +       + ++D +D  + SQRNG   I SSVANKR+A+G  VGS+FK+ E
Sbjct: 1250 LDSKKRKWKQVRERRKRQRLDTVD--ESSQRNGATSIPSSVANKRQAKGTGVGSYFKRQE 1307

Query: 156  LALTSNHWQ 130
            LAL ++HWQ
Sbjct: 1308 LALVNSHWQ 1316


>gb|PLY90544.1| hypothetical protein LSAT_6X39380 [Lactuca sativa]
          Length = 2178

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
 Frame = -1

Query: 336  MDQKKKTTRDGEPMLPKTQMDQLDNLDFSQRNGVAEIHSSVANKRKAQGNE-VGSFFKK* 160
            ++Q+K+  +       K ++D LD    +QRNGV EI S V+NK++AQG   V S+F++ 
Sbjct: 1227 LNQRKRKWKQVREKKKKQKLDSLDKN--TQRNGVTEIRSGVSNKKQAQGRTGVNSYFERH 1284

Query: 159  ELALTSNHWQ 130
            ELALT +HWQ
Sbjct: 1285 ELALTRSHWQ 1294


>ref|XP_023756876.1| DNA polymerase epsilon catalytic subunit A-like [Lactuca sativa]
          Length = 2199

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
 Frame = -1

Query: 336  MDQKKKTTRDGEPMLPKTQMDQLDNLDFSQRNGVAEIHSSVANKRKAQGNE-VGSFFKK* 160
            ++Q+K+  +       K ++D LD    +QRNGV EI S V+NK++AQG   V S+F++ 
Sbjct: 1248 LNQRKRKWKQVREKKKKQKLDSLDKN--TQRNGVTEIRSGVSNKKQAQGRTGVNSYFERH 1305

Query: 159  ELALTSNHWQ 130
            ELALT +HWQ
Sbjct: 1306 ELALTRSHWQ 1315


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