BLASTX nr result

ID: Chrysanthemum22_contig00010151 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00010151
         (557 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH99144.1| Bromodomain-containing protein [Cynara cardunculu...   134   7e-33
ref|XP_022039493.1| uncharacterized protein LOC110942090 isoform...    89   5e-17
ref|XP_022039492.1| uncharacterized protein LOC110942090 isoform...    89   5e-17

>gb|KVH99144.1| Bromodomain-containing protein [Cynara cardunculus var. scolymus]
          Length = 839

 Score =  134 bits (336), Expect = 7e-33
 Identities = 82/183 (44%), Positives = 103/183 (56%), Gaps = 23/183 (12%)
 Frame = +1

Query: 7   PPFLSSLHTNPSFSGSNVLHQNST------------QMELNRPPPTHVSAADFVARRPVS 150
           PPF SSL  NP+FSG+N+ HQN T            + + N P PTH S+ADF A+R +S
Sbjct: 450 PPFFSSLQVNPTFSGTNLPHQNDTPSRKFARPSPQVEPKPNHPLPTHASSADFFAKRLIS 509

Query: 151 SPSDILSLRPSKPV---GNLASLPSFNHPNSN--------KGNPTAVGLDSNRMAPTINS 297
           + SDI S RP+KP+   GNL SL SF HP  N        KG PT V  DSNRM P  ++
Sbjct: 510 NVSDIPSPRPAKPISQNGNLMSLASFKHPIPNGTNDGFSPKGKPTPVFQDSNRMVPIDSN 569

Query: 298 FPYGQEVRPVAVNPTTVGLDSNRMAPTINSFPYRQEVRPVAVNQTTVGLDSNRMAPTTNG 477
            PY QE +     PT+V  D NRM P  N  P++QE +P     T+   D NR+ P  N 
Sbjct: 570 LPYQQERK-----PTSVSRDYNRMVPMDNHLPHQQEQKP-----TSGSRDYNRIVPMDNT 619

Query: 478 LPY 486
           LP+
Sbjct: 620 LPH 622


>ref|XP_022039493.1| uncharacterized protein LOC110942090 isoform X2 [Helianthus annuus]
          Length = 835

 Score = 88.6 bits (218), Expect = 5e-17
 Identities = 58/106 (54%), Positives = 65/106 (61%), Gaps = 23/106 (21%)
 Frame = +1

Query: 37  PSFSGSNVLHQNST-------------QMELNRPPPTHV-SAADFVARRPVSSPSDILSL 174
           P FSGSN +HQNS              ++ELN PPP HV SAADFVA+RP+SS SDI   
Sbjct: 529 PFFSGSNPVHQNSQSRNFARPENTVLPRVELNHPPPLHVNSAADFVAKRPISSASDI--- 585

Query: 175 RPSKPV---GNLASLPSFNHPNSNK-----GNPT-AVGLDSNRMAP 285
            PSKPV   GNLASL SF HP+ N      G P+  VGLD NRM P
Sbjct: 586 -PSKPVSRNGNLASLGSFKHPSGNNDGFAPGRPSKLVGLDCNRMVP 630


>ref|XP_022039492.1| uncharacterized protein LOC110942090 isoform X1 [Helianthus annuus]
 gb|OTG26512.1| putative DNA-binding bromodomain-containing protein [Helianthus
           annuus]
          Length = 837

 Score = 88.6 bits (218), Expect = 5e-17
 Identities = 58/106 (54%), Positives = 65/106 (61%), Gaps = 23/106 (21%)
 Frame = +1

Query: 37  PSFSGSNVLHQNST-------------QMELNRPPPTHV-SAADFVARRPVSSPSDILSL 174
           P FSGSN +HQNS              ++ELN PPP HV SAADFVA+RP+SS SDI   
Sbjct: 531 PFFSGSNPVHQNSQSRNFARPENTVLPRVELNHPPPLHVNSAADFVAKRPISSASDI--- 587

Query: 175 RPSKPV---GNLASLPSFNHPNSNK-----GNPT-AVGLDSNRMAP 285
            PSKPV   GNLASL SF HP+ N      G P+  VGLD NRM P
Sbjct: 588 -PSKPVSRNGNLASLGSFKHPSGNNDGFAPGRPSKLVGLDCNRMVP 632


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