BLASTX nr result
ID: Chrysanthemum22_contig00010006
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00010006
(361 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_021988537.1| pre-mRNA-processing protein 40A isoform X4 [... 94 7e-20
ref|XP_021988536.1| pre-mRNA-processing protein 40A isoform X3 [... 94 7e-20
ref|XP_021988535.1| pre-mRNA-processing protein 40A isoform X2 [... 94 7e-20
ref|XP_021988534.1| pre-mRNA-processing protein 40A isoform X1 [... 94 7e-20
gb|KVH98803.1| FF domain-containing protein [Cynara cardunculus ... 82 1e-15
ref|XP_023746549.1| pre-mRNA-processing protein 40A isoform X4 [... 73 2e-12
ref|XP_023746548.1| pre-mRNA-processing protein 40A isoform X3 [... 73 2e-12
ref|XP_023746547.1| pre-mRNA-processing protein 40A isoform X2 [... 73 2e-12
ref|XP_023746546.1| pre-mRNA-processing protein 40A isoform X1 [... 73 2e-12
ref|XP_018833805.1| PREDICTED: pre-mRNA-processing protein 40A-l... 64 3e-09
ref|XP_018833803.1| PREDICTED: pre-mRNA-processing protein 40A-l... 64 3e-09
ref|XP_011074334.1| pre-mRNA-processing protein 40A [Sesamum ind... 62 8e-09
ref|XP_023535385.1| pre-mRNA-processing protein 40A isoform X2 [... 59 2e-07
ref|XP_022976965.1| pre-mRNA-processing protein 40A-like isoform... 59 2e-07
ref|XP_023535384.1| pre-mRNA-processing protein 40A isoform X1 [... 59 2e-07
ref|XP_022976964.1| pre-mRNA-processing protein 40A-like isoform... 59 2e-07
emb|CDP01015.1| unnamed protein product [Coffea canephora] 58 2e-07
ref|XP_022936970.1| pre-mRNA-processing protein 40A-like isoform... 58 2e-07
ref|XP_022936969.1| pre-mRNA-processing protein 40A-like isoform... 58 2e-07
ref|XP_008452677.1| PREDICTED: pre-mRNA-processing protein 40A [... 58 2e-07
>ref|XP_021988537.1| pre-mRNA-processing protein 40A isoform X4 [Helianthus annuus]
gb|OTG11129.1| putative pre-mRNA-processing protein 40A [Helianthus annuus]
Length = 922
Score = 94.0 bits (232), Expect = 7e-20
Identities = 55/105 (52%), Positives = 67/105 (63%)
Frame = +3
Query: 33 SSSSVAVTRVIPVVNAPLNVXXXXXXXXXHLIPPVGDSSMGSSPLGKTESSPSHGAPESL 212
SSS VAVT VIP NAP NV ++M SSPLGKTE+S SHG P+S+
Sbjct: 280 SSSPVAVTPVIPAGNAPPNVASEPSSTVS------ASANMHSSPLGKTENSSSHGVPKSI 333
Query: 213 DGVTVQNIEVAIKGMSVDEKVNTSSLEEKIADDEPLADATKQERK 347
DGV+VQ+ E A KGM+ KVNT+ ++EK ADDE A+KQE K
Sbjct: 334 DGVSVQDTEEAKKGMAAAGKVNTTPVDEKAADDEQFLYASKQEAK 378
>ref|XP_021988536.1| pre-mRNA-processing protein 40A isoform X3 [Helianthus annuus]
Length = 923
Score = 94.0 bits (232), Expect = 7e-20
Identities = 55/105 (52%), Positives = 67/105 (63%)
Frame = +3
Query: 33 SSSSVAVTRVIPVVNAPLNVXXXXXXXXXHLIPPVGDSSMGSSPLGKTESSPSHGAPESL 212
SSS VAVT VIP NAP NV ++M SSPLGKTE+S SHG P+S+
Sbjct: 281 SSSPVAVTPVIPAGNAPPNVASEPSSTVS------ASANMHSSPLGKTENSSSHGVPKSI 334
Query: 213 DGVTVQNIEVAIKGMSVDEKVNTSSLEEKIADDEPLADATKQERK 347
DGV+VQ+ E A KGM+ KVNT+ ++EK ADDE A+KQE K
Sbjct: 335 DGVSVQDTEEAKKGMAAAGKVNTTPVDEKAADDEQFLYASKQEAK 379
>ref|XP_021988535.1| pre-mRNA-processing protein 40A isoform X2 [Helianthus annuus]
Length = 943
Score = 94.0 bits (232), Expect = 7e-20
Identities = 55/105 (52%), Positives = 67/105 (63%)
Frame = +3
Query: 33 SSSSVAVTRVIPVVNAPLNVXXXXXXXXXHLIPPVGDSSMGSSPLGKTESSPSHGAPESL 212
SSS VAVT VIP NAP NV ++M SSPLGKTE+S SHG P+S+
Sbjct: 301 SSSPVAVTPVIPAGNAPPNVASEPSSTVS------ASANMHSSPLGKTENSSSHGVPKSI 354
Query: 213 DGVTVQNIEVAIKGMSVDEKVNTSSLEEKIADDEPLADATKQERK 347
DGV+VQ+ E A KGM+ KVNT+ ++EK ADDE A+KQE K
Sbjct: 355 DGVSVQDTEEAKKGMAAAGKVNTTPVDEKAADDEQFLYASKQEAK 399
>ref|XP_021988534.1| pre-mRNA-processing protein 40A isoform X1 [Helianthus annuus]
Length = 944
Score = 94.0 bits (232), Expect = 7e-20
Identities = 55/105 (52%), Positives = 67/105 (63%)
Frame = +3
Query: 33 SSSSVAVTRVIPVVNAPLNVXXXXXXXXXHLIPPVGDSSMGSSPLGKTESSPSHGAPESL 212
SSS VAVT VIP NAP NV ++M SSPLGKTE+S SHG P+S+
Sbjct: 302 SSSPVAVTPVIPAGNAPPNVASEPSSTVS------ASANMHSSPLGKTENSSSHGVPKSI 355
Query: 213 DGVTVQNIEVAIKGMSVDEKVNTSSLEEKIADDEPLADATKQERK 347
DGV+VQ+ E A KGM+ KVNT+ ++EK ADDE A+KQE K
Sbjct: 356 DGVSVQDTEEAKKGMAAAGKVNTTPVDEKAADDEQFLYASKQEAK 400
>gb|KVH98803.1| FF domain-containing protein [Cynara cardunculus var. scolymus]
Length = 1071
Score = 82.0 bits (201), Expect = 1e-15
Identities = 54/112 (48%), Positives = 67/112 (59%), Gaps = 7/112 (6%)
Frame = +3
Query: 33 SSSSVAVTRVIPVVNAPLNVXXXXXXXXXH-------LIPPVGDSSMGSSPLGKTESSPS 191
+SS VAV VIPV N P NV LIP VG +SM SP+ TE+S S
Sbjct: 308 ASSPVAVAPVIPVGNVPPNVGSESSSTAAGERVTAVPLIPAVGGASM-VSPMTSTENSSS 366
Query: 192 HGAPESLDGVTVQNIEVAIKGMSVDEKVNTSSLEEKIADDEPLADATKQERK 347
HG P++++ V+ Q+ E A KGM+V KVNT+ LEEK DDEP A+KQE K
Sbjct: 367 HGVPKAVE-VSAQDTEEAKKGMAVAGKVNTTQLEEKAVDDEPFIYASKQEAK 417
>ref|XP_023746549.1| pre-mRNA-processing protein 40A isoform X4 [Lactuca sativa]
Length = 760
Score = 72.8 bits (177), Expect = 2e-12
Identities = 39/75 (52%), Positives = 52/75 (69%)
Frame = +3
Query: 123 LIPPVGDSSMGSSPLGKTESSPSHGAPESLDGVTVQNIEVAIKGMSVDEKVNTSSLEEKI 302
+IPP ++ SSP+ K E S SHG P++LDGV+ + E A KGM+V KVNT+ +EEK+
Sbjct: 315 MIPP----NLHSSPM-KMEDSSSHGVPKTLDGVSTHDTEEAKKGMAVAGKVNTTQIEEKV 369
Query: 303 ADDEPLADATKQERK 347
DDEP A+KQE K
Sbjct: 370 VDDEPFIYASKQEAK 384
>ref|XP_023746548.1| pre-mRNA-processing protein 40A isoform X3 [Lactuca sativa]
Length = 933
Score = 72.8 bits (177), Expect = 2e-12
Identities = 39/75 (52%), Positives = 52/75 (69%)
Frame = +3
Query: 123 LIPPVGDSSMGSSPLGKTESSPSHGAPESLDGVTVQNIEVAIKGMSVDEKVNTSSLEEKI 302
+IPP ++ SSP+ K E S SHG P++LDGV+ + E A KGM+V KVNT+ +EEK+
Sbjct: 302 MIPP----NLHSSPM-KMEDSSSHGVPKTLDGVSTHDTEEAKKGMAVAGKVNTTQIEEKV 356
Query: 303 ADDEPLADATKQERK 347
DDEP A+KQE K
Sbjct: 357 VDDEPFIYASKQEAK 371
>ref|XP_023746547.1| pre-mRNA-processing protein 40A isoform X2 [Lactuca sativa]
Length = 945
Score = 72.8 bits (177), Expect = 2e-12
Identities = 39/75 (52%), Positives = 52/75 (69%)
Frame = +3
Query: 123 LIPPVGDSSMGSSPLGKTESSPSHGAPESLDGVTVQNIEVAIKGMSVDEKVNTSSLEEKI 302
+IPP ++ SSP+ K E S SHG P++LDGV+ + E A KGM+V KVNT+ +EEK+
Sbjct: 314 MIPP----NLHSSPM-KMEDSSSHGVPKTLDGVSTHDTEEAKKGMAVAGKVNTTQIEEKV 368
Query: 303 ADDEPLADATKQERK 347
DDEP A+KQE K
Sbjct: 369 VDDEPFIYASKQEAK 383
>ref|XP_023746546.1| pre-mRNA-processing protein 40A isoform X1 [Lactuca sativa]
gb|PLY64144.1| hypothetical protein LSAT_1X581 [Lactuca sativa]
Length = 946
Score = 72.8 bits (177), Expect = 2e-12
Identities = 39/75 (52%), Positives = 52/75 (69%)
Frame = +3
Query: 123 LIPPVGDSSMGSSPLGKTESSPSHGAPESLDGVTVQNIEVAIKGMSVDEKVNTSSLEEKI 302
+IPP ++ SSP+ K E S SHG P++LDGV+ + E A KGM+V KVNT+ +EEK+
Sbjct: 315 MIPP----NLHSSPM-KMEDSSSHGVPKTLDGVSTHDTEEAKKGMAVAGKVNTTQIEEKV 369
Query: 303 ADDEPLADATKQERK 347
DDEP A+KQE K
Sbjct: 370 VDDEPFIYASKQEAK 384
>ref|XP_018833805.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Juglans
regia]
Length = 1035
Score = 63.5 bits (153), Expect = 3e-09
Identities = 34/76 (44%), Positives = 47/76 (61%)
Frame = +3
Query: 132 PVGDSSMGSSPLGKTESSPSHGAPESLDGVTVQNIEVAIKGMSVDEKVNTSSLEEKIADD 311
P ++ SS + E++ S P S+DG + Q+IE A KGM+V KVN ++LEEK DD
Sbjct: 408 PAASTNANSSSMSHFETTASQEFPGSIDGASAQDIEEAKKGMTVAGKVNVTALEEKTLDD 467
Query: 312 EPLADATKQERKDISK 359
EPL A+K E K+ K
Sbjct: 468 EPLLYASKLEAKNAFK 483
>ref|XP_018833803.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Juglans
regia]
ref|XP_018833804.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Juglans
regia]
Length = 1036
Score = 63.5 bits (153), Expect = 3e-09
Identities = 34/76 (44%), Positives = 47/76 (61%)
Frame = +3
Query: 132 PVGDSSMGSSPLGKTESSPSHGAPESLDGVTVQNIEVAIKGMSVDEKVNTSSLEEKIADD 311
P ++ SS + E++ S P S+DG + Q+IE A KGM+V KVN ++LEEK DD
Sbjct: 409 PAASTNANSSSMSHFETTASQEFPGSIDGASAQDIEEAKKGMTVAGKVNVTALEEKTLDD 468
Query: 312 EPLADATKQERKDISK 359
EPL A+K E K+ K
Sbjct: 469 EPLLYASKLEAKNAFK 484
>ref|XP_011074334.1| pre-mRNA-processing protein 40A [Sesamum indicum]
ref|XP_011074335.1| pre-mRNA-processing protein 40A [Sesamum indicum]
ref|XP_011074336.1| pre-mRNA-processing protein 40A [Sesamum indicum]
Length = 1028
Score = 62.4 bits (150), Expect = 8e-09
Identities = 32/76 (42%), Positives = 46/76 (60%)
Frame = +3
Query: 132 PVGDSSMGSSPLGKTESSPSHGAPESLDGVTVQNIEVAIKGMSVDEKVNTSSLEEKIADD 311
P+ S S+P+ E+ P H L G ++Q+IE A +GM+V K+N + +EEK DD
Sbjct: 393 PIVLPSANSTPVTSLENPPLHVGASPLAGASIQDIEEAKRGMAVAGKINVTPVEEKTTDD 452
Query: 312 EPLADATKQERKDISK 359
EP+ ATKQE K+ K
Sbjct: 453 EPIIYATKQEAKNAFK 468
>ref|XP_023535385.1| pre-mRNA-processing protein 40A isoform X2 [Cucurbita pepo subsp.
pepo]
Length = 975
Score = 58.5 bits (140), Expect = 2e-07
Identities = 32/61 (52%), Positives = 39/61 (63%)
Frame = +3
Query: 177 ESSPSHGAPESLDGVTVQNIEVAIKGMSVDEKVNTSSLEEKIADDEPLADATKQERKDIS 356
ES SH S+DG + ++IE A KGM+V KVN + LEEK ADDEPL A K E K+
Sbjct: 368 ESLASHDVKNSVDGTSTEDIEEARKGMAVAGKVNETVLEEKSADDEPLVFANKLEAKNAF 427
Query: 357 K 359
K
Sbjct: 428 K 428
>ref|XP_022976965.1| pre-mRNA-processing protein 40A-like isoform X2 [Cucurbita maxima]
Length = 975
Score = 58.5 bits (140), Expect = 2e-07
Identities = 32/61 (52%), Positives = 39/61 (63%)
Frame = +3
Query: 177 ESSPSHGAPESLDGVTVQNIEVAIKGMSVDEKVNTSSLEEKIADDEPLADATKQERKDIS 356
ES SH S+DG + ++IE A KGM+V KVN + LEEK ADDEPL A K E K+
Sbjct: 368 ESLASHDVKNSVDGTSTEDIEEARKGMAVAGKVNETVLEEKSADDEPLVFANKLEAKNAF 427
Query: 357 K 359
K
Sbjct: 428 K 428
>ref|XP_023535384.1| pre-mRNA-processing protein 40A isoform X1 [Cucurbita pepo subsp.
pepo]
Length = 976
Score = 58.5 bits (140), Expect = 2e-07
Identities = 32/61 (52%), Positives = 39/61 (63%)
Frame = +3
Query: 177 ESSPSHGAPESLDGVTVQNIEVAIKGMSVDEKVNTSSLEEKIADDEPLADATKQERKDIS 356
ES SH S+DG + ++IE A KGM+V KVN + LEEK ADDEPL A K E K+
Sbjct: 369 ESLASHDVKNSVDGTSTEDIEEARKGMAVAGKVNETVLEEKSADDEPLVFANKLEAKNAF 428
Query: 357 K 359
K
Sbjct: 429 K 429
>ref|XP_022976964.1| pre-mRNA-processing protein 40A-like isoform X1 [Cucurbita maxima]
Length = 976
Score = 58.5 bits (140), Expect = 2e-07
Identities = 32/61 (52%), Positives = 39/61 (63%)
Frame = +3
Query: 177 ESSPSHGAPESLDGVTVQNIEVAIKGMSVDEKVNTSSLEEKIADDEPLADATKQERKDIS 356
ES SH S+DG + ++IE A KGM+V KVN + LEEK ADDEPL A K E K+
Sbjct: 369 ESLASHDVKNSVDGTSTEDIEEARKGMAVAGKVNETVLEEKSADDEPLVFANKLEAKNAF 428
Query: 357 K 359
K
Sbjct: 429 K 429
>emb|CDP01015.1| unnamed protein product [Coffea canephora]
Length = 815
Score = 58.2 bits (139), Expect = 2e-07
Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Frame = +3
Query: 33 SSSSVAVTRVIPVVNAPLNVXXXXXXXXXHL--------IPPVGDSSMGSSP------LG 170
+SS +AVT V VVN+P +P +G++S +P +
Sbjct: 115 ASSPIAVTPVAAVVNSPTVAVFGSPAVPTVQPAVTSMVSVPSLGETSASPAPTTGSLGMH 174
Query: 171 KTESSPSHGAPESLDGVTVQNIEVAIKGMSVDEKVNTSSLEEKIADDEPLADATKQERKD 350
E++ SH A S + Q+IE A KGM+V KVN ++ EEK DDEPL KQE K+
Sbjct: 175 NVENNSSHIAEGSTGEASSQDIEEAKKGMAVAGKVNVTTSEEKPMDDEPLVFTNKQEAKN 234
Query: 351 ISK 359
K
Sbjct: 235 AFK 237
>ref|XP_022936970.1| pre-mRNA-processing protein 40A-like isoform X2 [Cucurbita
moschata]
Length = 975
Score = 58.2 bits (139), Expect = 2e-07
Identities = 32/61 (52%), Positives = 39/61 (63%)
Frame = +3
Query: 177 ESSPSHGAPESLDGVTVQNIEVAIKGMSVDEKVNTSSLEEKIADDEPLADATKQERKDIS 356
ES SH S+DG + ++IE A KGM+V KVN + LEEK ADDEPL A K E K+
Sbjct: 368 ESLASHDVKNSVDGTSTEDIEEARKGMAVAGKVNETVLEEKSADDEPLIFANKLEAKNAF 427
Query: 357 K 359
K
Sbjct: 428 K 428
>ref|XP_022936969.1| pre-mRNA-processing protein 40A-like isoform X1 [Cucurbita
moschata]
Length = 976
Score = 58.2 bits (139), Expect = 2e-07
Identities = 32/61 (52%), Positives = 39/61 (63%)
Frame = +3
Query: 177 ESSPSHGAPESLDGVTVQNIEVAIKGMSVDEKVNTSSLEEKIADDEPLADATKQERKDIS 356
ES SH S+DG + ++IE A KGM+V KVN + LEEK ADDEPL A K E K+
Sbjct: 369 ESLASHDVKNSVDGTSTEDIEEARKGMAVAGKVNETVLEEKSADDEPLIFANKLEAKNAF 428
Query: 357 K 359
K
Sbjct: 429 K 429
>ref|XP_008452677.1| PREDICTED: pre-mRNA-processing protein 40A [Cucumis melo]
Length = 985
Score = 58.2 bits (139), Expect = 2e-07
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +3
Query: 156 SSPLGKTESSPSHGAPESLDGVTVQNIEVAIKGMSVDEKVNTSSLEEKIADDEPLADATK 335
+S + +ES S ++DG + ++IE A KGM+V KVN + LEEK ADDEPL A K
Sbjct: 371 ASSVTPSESLASQDVKNTVDGTSTEDIEEARKGMAVAGKVNETVLEEKSADDEPLVFANK 430
Query: 336 QERKDISK 359
QE K+ K
Sbjct: 431 QEAKNAFK 438