BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00009906
         (2420 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_835261.1| methyltransferase [Indian peanut clump virus] >...   866   0.0  
ref|NP_620040.1| hypothetical replicase [Peanut clump virus] >gi...   858   0.0  
ref|NP_835282.1| polymerase [Indian peanut clump virus]               866   0.0  
ref|NP_620047.1| replicase [Peanut clump virus] >gi|334350865|sp...   858   0.0  
gb|AUW36672.1| alpha a protein [Barley stripe mosaic virus]           330   2e-94
gb|AUW36673.1| alpha a protein [Barley stripe mosaic virus]           329   2e-94
gb|AAA79147.1| alpha protein [Barley stripe mosaic virus]             329   3e-94
gb|AAA79146.1| alpha protein [Barley stripe mosaic virus]             329   3e-94
gb|AIT18335.1| alpha a protein [Barley stripe mosaic virus]           328   4e-94
gb|AHY22367.1| alpha protein [Barley stripe mosaic virus]             328   4e-94
gb|AAA79145.1| alpha protein [Barley stripe mosaic virus]             327   1e-93
gb|AEP04414.1| alpha protein [Barley stripe mosaic virus]             327   1e-93
gb|AUW36693.1| alpha a protein [Barley stripe mosaic virus]           325   5e-93
gb|ATO98263.1| alpha A protein [Lychnis ringspot virus]               325   5e-93
ref|YP_009047251.1| putative methyltransferase/helicase [Gentian...   326   6e-93
gb|AAA19829.1| alpha protein [Barley stripe mosaic virus]             325   1e-92
ref|NP_604474.1| alpha protein [Barley stripe mosaic virus] >gi|...   325   1e-92
gb|AUW36674.1| alpha a protein [Barley stripe mosaic virus]           324   2e-92
gb|AAV67979.1| alpha protein [Barley stripe mosaic virus]             323   3e-92
dbj|BAA94796.1| 152-kDa protein [Japanese soil-borne wheat mosai...   322   7e-91

>ref|NP_835261.1| methyltransferase [Indian peanut clump virus]
 emb|CAA67586.1| methyltransferase [Indian peanut clump virus]
          Length = 1130

 Score =  866 bits (2237), Expect = 0.0
 Identities = 433/616 (70%), Positives = 502/616 (81%), Gaps = 1/616 (0%)
 Frame = -2

Query: 2059 MAQTNIYADMIDLYVNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKEL 1880
            MAQ+NIY+DMID YVNDE VVQNLFMTAS+TT S+LHDVIADRAANHLK LE  Q QKEL
Sbjct: 1    MAQSNIYSDMIDRYVNDETVVQNLFMTASSTTKSLLHDVIADRAANHLKSLEKKQKQKEL 60

Query: 1879 VDVRRVLCSESINALSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVW 1700
            VDVRRVL SES+NAL SLYPEFNV TSN+ERGSHTMAAVCRTLET+YIKSLLPV  TVVW
Sbjct: 61   VDVRRVLSSESLNALCSLYPEFNVITSNRERGSHTMAAVCRTLETLYIKSLLPVNDTVVW 120

Query: 1699 DVGGNWLTNLKYWLTNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFARNGNIAPDF 1520
            DVGGNWLT++KY        ++  VHCCCPLL+YRDA RKQER+ ++E+FARNG    + 
Sbjct: 121  DVGGNWLTHVKY-------STNQDVHCCCPLLDYRDAMRKQERILSLELFARNGKEKTEE 173

Query: 1519 FEA-YTAVKTYEQQRMELLNAGKPEIAGNNHYCCNTFQTCNWEPEGENMKVAMGVHSVHD 1343
            F+A Y  ++ +E  R   ++AGK  +  N+ YCC+ FQ C +EP+   ++VAMGVHSV+D
Sbjct: 174  FDACYQQIRNFENTRRTAISAGK-NVVMNDRYCCDVFQNCAYEPDSGKLRVAMGVHSVYD 232

Query: 1342 MTLQDMADGLERKNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTT 1163
            MTLQ++ DGLERK I+HFIGCFLFSPKLLLGQ+EG+LP           KIRFFF DDTT
Sbjct: 233  MTLQELVDGLERKKIEHFIGCFLFSPKLLLGQEEGELPFVNGRFKVKKGKIRFFFLDDTT 292

Query: 1162 HGYEHDLNDYLDYVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVTEYSLLKTGFLSSD 983
            HGYEHDLNDYL+Y+RKSFVVAK GHVYMLE+F +RGDT+FFKLYDVTEYSL KTGFLS+ 
Sbjct: 293  HGYEHDLNDYLEYIRKSFVVAKCGHVYMLELFSMRGDTVFFKLYDVTEYSLSKTGFLSTL 352

Query: 982  YPVSDSVFKAMPIGQTDEVIVPLYWIVDGEVVVERKYLPKSLVSRSMEWLMRNKANALQY 803
             P  D VFKAMPI  TDEVIVPLYWI +GEVVVER+YLPKSLV R MEWLMRNKANALQY
Sbjct: 353  LPTRDHVFKAMPIPNTDEVIVPLYWIENGEVVVERRYLPKSLVCRGMEWLMRNKANALQY 412

Query: 802  ETLLNYIVSTNVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVK 623
            ETLLNY+VSTNVSA FNGCQVREGLKTDPW+L KLAMTLLVREEFNREKQKK+L +LR+ 
Sbjct: 413  ETLLNYLVSTNVSAVFNGCQVREGLKTDPWILCKLAMTLLVREEFNREKQKKVLEMLRLS 472

Query: 622  GAEEISLKQLVKGVFEKVFGPVSLKARVLKKLARWCGVEYGEMKYDIDVLPLYVEIEDCI 443
            G+E+ISLK++ KGVFEK FG VSLKARVL+ +ARWCGVE+G MKYD+DVLPLYVEIED I
Sbjct: 473  GSEQISLKRIFKGVFEKFFGSVSLKARVLRTVARWCGVEFGSMKYDVDVLPLYVEIEDSI 532

Query: 442  RLWRKGKLEGIESYDMEEEVKRGLDKKEDIKKLATELKGKIXXXXXXXXXXX*KKLVAAH 263
             LWRKGKLEGIE+YDM++EV R  DKK+D+++L   LK K+             K +AA 
Sbjct: 533  TLWRKGKLEGIEAYDMKDEVMRYNDKKQDVERLTQTLKDKVSEDGSASDSSSRLKKLAAF 592

Query: 262  ILCALCGRETPLARFI 215
             + A  G++TPL RFI
Sbjct: 593  AVLA-SGKDTPLGRFI 607


>ref|NP_620040.1| hypothetical replicase [Peanut clump virus]
 emb|CAA55335.1| orf1 [Peanut clump virus]
          Length = 1145

 Score =  858 bits (2216), Expect = 0.0
 Identities = 433/616 (70%), Positives = 497/616 (80%), Gaps = 1/616 (0%)
 Frame = -2

Query: 2059 MAQTNIYADMIDLYVNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKEL 1880
            MAQ+NIY+DMID YVNDE VVQNLFMTAS+TT S+LHDVIADRAANHLK LE  Q QKEL
Sbjct: 1    MAQSNIYSDMIDRYVNDETVVQNLFMTASSTTKSLLHDVIADRAANHLKSLEKKQKQKEL 60

Query: 1879 VDVRRVLCSESINALSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVW 1700
            VDVRRVL SES+NAL +LYPEF+V TSN ERGSHTMAAVCRTLET+YIKSLLPVK+TVVW
Sbjct: 61   VDVRRVLSSESLNALCALYPEFHVITSNCERGSHTMAAVCRTLETLYIKSLLPVKHTVVW 120

Query: 1699 DVGGNWLTNLKYWLTNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFARNGNI-APD 1523
            DVGGNWLT++KY        SD  VHCCCPLL+YRDA RKQER+ ++E+FARNG     +
Sbjct: 121  DVGGNWLTHVKY-------ASDQNVHCCCPLLDYRDAMRKQERLLSLELFARNGKEKTEE 173

Query: 1522 FFEAYTAVKTYEQQRMELLNAGKPEIAGNNHYCCNTFQTCNWEPEGENMKVAMGVHSVHD 1343
            F E Y  +K +E QR   LNAG      NN YCC+ FQ C +EPE   M+VAMGVHSV+D
Sbjct: 174  FDECYKQIKAFELQRRAALNAGTAASC-NNKYCCDVFQDCAYEPEEGKMRVAMGVHSVYD 232

Query: 1342 MTLQDMADGLERKNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTT 1163
            MTLQD+ +GLERK I+HFIGCFLFSPKLLLGQ+EG+LP           KIRFFF DDTT
Sbjct: 233  MTLQDLVNGLERKGIEHFIGCFLFSPKLLLGQEEGELPFVNGRFKVKKGKIRFFFLDDTT 292

Query: 1162 HGYEHDLNDYLDYVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVTEYSLLKTGFLSSD 983
            HGYEHDLNDYLDY++KSFVVAK GHVYMLE+F VRGDT+FFKLYDVTEYSL +T  LSS 
Sbjct: 293  HGYEHDLNDYLDYIKKSFVVAKCGHVYMLELFSVRGDTIFFKLYDVTEYSLSRTRLLSSL 352

Query: 982  YPVSDSVFKAMPIGQTDEVIVPLYWIVDGEVVVERKYLPKSLVSRSMEWLMRNKANALQY 803
             P  D VFKAMPI  T+EVIVPLYWI +GEVVVER+YLPKSLV R MEWLMRNKANALQY
Sbjct: 353  LPTRDHVFKAMPIPNTEEVIVPLYWIENGEVVVERRYLPKSLVCRGMEWLMRNKANALQY 412

Query: 802  ETLLNYIVSTNVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVK 623
            ETLLNY+VSTNVSA FNGCQVREGLKTDPW+L KLAMTLLVREEFNREKQKKIL +LR+ 
Sbjct: 413  ETLLNYLVSTNVSAVFNGCQVREGLKTDPWILCKLAMTLLVREEFNREKQKKILEMLRMS 472

Query: 622  GAEEISLKQLVKGVFEKVFGPVSLKARVLKKLARWCGVEYGEMKYDIDVLPLYVEIEDCI 443
            G+E+ISLK + +GVF K FG VSLKARVLK +ARWCGVE+G MKYD++VLPLYVEIED +
Sbjct: 473  GSEQISLKSIFRGVFVKFFGSVSLKARVLKTVARWCGVEFGSMKYDVEVLPLYVEIEDSL 532

Query: 442  RLWRKGKLEGIESYDMEEEVKRGLDKKEDIKKLATELKGKIXXXXXXXXXXX*KKLVAAH 263
             LWRKG+LEGIESYDM++EV R  +KK+D+++L   L+ K+            KK+ A  
Sbjct: 533  CLWRKGRLEGIESYDMKDEVLRYNEKKQDVERLTRSLEQKVNDGSASDTSSKLKKVAAFA 592

Query: 262  ILCALCGRETPLARFI 215
            +L +   ++TPL RFI
Sbjct: 593  VLAS--NKDTPLGRFI 606


>ref|NP_835282.1| polymerase [Indian peanut clump virus]
          Length = 1657

 Score =  866 bits (2237), Expect = 0.0
 Identities = 433/616 (70%), Positives = 502/616 (81%), Gaps = 1/616 (0%)
 Frame = -2

Query: 2059 MAQTNIYADMIDLYVNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKEL 1880
            MAQ+NIY+DMID YVNDE VVQNLFMTAS+TT S+LHDVIADRAANHLK LE  Q QKEL
Sbjct: 1    MAQSNIYSDMIDRYVNDETVVQNLFMTASSTTKSLLHDVIADRAANHLKSLEKKQKQKEL 60

Query: 1879 VDVRRVLCSESINALSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVW 1700
            VDVRRVL SES+NAL SLYPEFNV TSN+ERGSHTMAAVCRTLET+YIKSLLPV  TVVW
Sbjct: 61   VDVRRVLSSESLNALCSLYPEFNVITSNRERGSHTMAAVCRTLETLYIKSLLPVNDTVVW 120

Query: 1699 DVGGNWLTNLKYWLTNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFARNGNIAPDF 1520
            DVGGNWLT++KY        ++  VHCCCPLL+YRDA RKQER+ ++E+FARNG    + 
Sbjct: 121  DVGGNWLTHVKY-------STNQDVHCCCPLLDYRDAMRKQERILSLELFARNGKEKTEE 173

Query: 1519 FEA-YTAVKTYEQQRMELLNAGKPEIAGNNHYCCNTFQTCNWEPEGENMKVAMGVHSVHD 1343
            F+A Y  ++ +E  R   ++AGK  +  N+ YCC+ FQ C +EP+   ++VAMGVHSV+D
Sbjct: 174  FDACYQQIRNFENTRRTAISAGK-NVVMNDRYCCDVFQNCAYEPDSGKLRVAMGVHSVYD 232

Query: 1342 MTLQDMADGLERKNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTT 1163
            MTLQ++ DGLERK I+HFIGCFLFSPKLLLGQ+EG+LP           KIRFFF DDTT
Sbjct: 233  MTLQELVDGLERKKIEHFIGCFLFSPKLLLGQEEGELPFVNGRFKVKKGKIRFFFLDDTT 292

Query: 1162 HGYEHDLNDYLDYVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVTEYSLLKTGFLSSD 983
            HGYEHDLNDYL+Y+RKSFVVAK GHVYMLE+F +RGDT+FFKLYDVTEYSL KTGFLS+ 
Sbjct: 293  HGYEHDLNDYLEYIRKSFVVAKCGHVYMLELFSMRGDTVFFKLYDVTEYSLSKTGFLSTL 352

Query: 982  YPVSDSVFKAMPIGQTDEVIVPLYWIVDGEVVVERKYLPKSLVSRSMEWLMRNKANALQY 803
             P  D VFKAMPI  TDEVIVPLYWI +GEVVVER+YLPKSLV R MEWLMRNKANALQY
Sbjct: 353  LPTRDHVFKAMPIPNTDEVIVPLYWIENGEVVVERRYLPKSLVCRGMEWLMRNKANALQY 412

Query: 802  ETLLNYIVSTNVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVK 623
            ETLLNY+VSTNVSA FNGCQVREGLKTDPW+L KLAMTLLVREEFNREKQKK+L +LR+ 
Sbjct: 413  ETLLNYLVSTNVSAVFNGCQVREGLKTDPWILCKLAMTLLVREEFNREKQKKVLEMLRLS 472

Query: 622  GAEEISLKQLVKGVFEKVFGPVSLKARVLKKLARWCGVEYGEMKYDIDVLPLYVEIEDCI 443
            G+E+ISLK++ KGVFEK FG VSLKARVL+ +ARWCGVE+G MKYD+DVLPLYVEIED I
Sbjct: 473  GSEQISLKRIFKGVFEKFFGSVSLKARVLRTVARWCGVEFGSMKYDVDVLPLYVEIEDSI 532

Query: 442  RLWRKGKLEGIESYDMEEEVKRGLDKKEDIKKLATELKGKIXXXXXXXXXXX*KKLVAAH 263
             LWRKGKLEGIE+YDM++EV R  DKK+D+++L   LK K+             K +AA 
Sbjct: 533  TLWRKGKLEGIEAYDMKDEVMRYNDKKQDVERLTQTLKDKVSEDGSASDSSSRLKKLAAF 592

Query: 262  ILCALCGRETPLARFI 215
             + A  G++TPL RFI
Sbjct: 593  AVLA-SGKDTPLGRFI 607


>ref|NP_620047.1| replicase [Peanut clump virus]
 sp|Q84687.2|RDRP_PCV87 RecName: Full=Replicase large subunit; AltName: Full=RNA-directed RNA
            polymerase; Contains: RecName: Full=Replicase small
            subunit; AltName: Full=Methyltransferase/RNA helicase
          Length = 1672

 Score =  858 bits (2216), Expect = 0.0
 Identities = 433/616 (70%), Positives = 497/616 (80%), Gaps = 1/616 (0%)
 Frame = -2

Query: 2059 MAQTNIYADMIDLYVNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKEL 1880
            MAQ+NIY+DMID YVNDE VVQNLFMTAS+TT S+LHDVIADRAANHLK LE  Q QKEL
Sbjct: 1    MAQSNIYSDMIDRYVNDETVVQNLFMTASSTTKSLLHDVIADRAANHLKSLEKKQKQKEL 60

Query: 1879 VDVRRVLCSESINALSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVW 1700
            VDVRRVL SES+NAL +LYPEF+V TSN ERGSHTMAAVCRTLET+YIKSLLPVK+TVVW
Sbjct: 61   VDVRRVLSSESLNALCALYPEFHVITSNCERGSHTMAAVCRTLETLYIKSLLPVKHTVVW 120

Query: 1699 DVGGNWLTNLKYWLTNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFARNGNI-APD 1523
            DVGGNWLT++KY        SD  VHCCCPLL+YRDA RKQER+ ++E+FARNG     +
Sbjct: 121  DVGGNWLTHVKY-------ASDQNVHCCCPLLDYRDAMRKQERLLSLELFARNGKEKTEE 173

Query: 1522 FFEAYTAVKTYEQQRMELLNAGKPEIAGNNHYCCNTFQTCNWEPEGENMKVAMGVHSVHD 1343
            F E Y  +K +E QR   LNAG      NN YCC+ FQ C +EPE   M+VAMGVHSV+D
Sbjct: 174  FDECYKQIKAFELQRRAALNAGTAASC-NNKYCCDVFQDCAYEPEEGKMRVAMGVHSVYD 232

Query: 1342 MTLQDMADGLERKNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTT 1163
            MTLQD+ +GLERK I+HFIGCFLFSPKLLLGQ+EG+LP           KIRFFF DDTT
Sbjct: 233  MTLQDLVNGLERKGIEHFIGCFLFSPKLLLGQEEGELPFVNGRFKVKKGKIRFFFLDDTT 292

Query: 1162 HGYEHDLNDYLDYVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVTEYSLLKTGFLSSD 983
            HGYEHDLNDYLDY++KSFVVAK GHVYMLE+F VRGDT+FFKLYDVTEYSL +T  LSS 
Sbjct: 293  HGYEHDLNDYLDYIKKSFVVAKCGHVYMLELFSVRGDTIFFKLYDVTEYSLSRTRLLSSL 352

Query: 982  YPVSDSVFKAMPIGQTDEVIVPLYWIVDGEVVVERKYLPKSLVSRSMEWLMRNKANALQY 803
             P  D VFKAMPI  T+EVIVPLYWI +GEVVVER+YLPKSLV R MEWLMRNKANALQY
Sbjct: 353  LPTRDHVFKAMPIPNTEEVIVPLYWIENGEVVVERRYLPKSLVCRGMEWLMRNKANALQY 412

Query: 802  ETLLNYIVSTNVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVK 623
            ETLLNY+VSTNVSA FNGCQVREGLKTDPW+L KLAMTLLVREEFNREKQKKIL +LR+ 
Sbjct: 413  ETLLNYLVSTNVSAVFNGCQVREGLKTDPWILCKLAMTLLVREEFNREKQKKILEMLRMS 472

Query: 622  GAEEISLKQLVKGVFEKVFGPVSLKARVLKKLARWCGVEYGEMKYDIDVLPLYVEIEDCI 443
            G+E+ISLK + +GVF K FG VSLKARVLK +ARWCGVE+G MKYD++VLPLYVEIED +
Sbjct: 473  GSEQISLKSIFRGVFVKFFGSVSLKARVLKTVARWCGVEFGSMKYDVEVLPLYVEIEDSL 532

Query: 442  RLWRKGKLEGIESYDMEEEVKRGLDKKEDIKKLATELKGKIXXXXXXXXXXX*KKLVAAH 263
             LWRKG+LEGIESYDM++EV R  +KK+D+++L   L+ K+            KK+ A  
Sbjct: 533  CLWRKGRLEGIESYDMKDEVLRYNEKKQDVERLTRSLEQKVNDGSASDTSSKLKKVAAFA 592

Query: 262  ILCALCGRETPLARFI 215
            +L +   ++TPL RFI
Sbjct: 593  VLAS--NKDTPLGRFI 606


>gb|AUW36672.1| alpha a protein [Barley stripe mosaic virus]
          Length = 1138

 Score =  330 bits (845), Expect = 2e-94
 Identities = 199/574 (34%), Positives = 317/574 (55%), Gaps = 8/574 (1%)
 Frame = -2

Query: 2017 VNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKELVDVRRVLCSESINA 1838
            ++ E+V+ NL  TAS++  S LHDV+       +  ++     ++ VDVRR + SE +  
Sbjct: 11   ISREEVMGNLISTASSSVRSPLHDVLCSHVRTIVDSVDKKAVSRKHVDVRRNISSEELQM 70

Query: 1837 LSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVWDVGGNWLTNLKYWL 1658
            L + YPE+ V++S  E G+H+MAA  R LET Y+  ++P+K T V+D+GGN       W 
Sbjct: 71   LMNAYPEYAVSSSACESGTHSMAACFRFLETEYLLDMVPMKETFVYDIGGN-------WF 123

Query: 1657 TNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFARNGNIAP-DFFEAYTAVKTYEQQ 1481
            +++K+ +D  +HCCCP+L+ RD+ R + RM AM+ + R     P      Y  +   +  
Sbjct: 124  SHMKFRADREIHCCCPILSMRDSERLETRMMAMQKYMRGSKDKPLRLLSRYQNILREQAV 183

Query: 1480 RMELLNAGKPE--IAGNNHYCCNTFQTC-NWEPEGENMKVAMGVHSVHDMTLQDMADGLE 1310
            R     AG+    +     +C NTFQ C    PEG  +K A+ VHS++D+ +++ A  L+
Sbjct: 184  RTTAFTAGEVNAGVLDGEVFCENTFQDCVRRVPEG-FLKTAIAVHSIYDIKVEEFASALK 242

Query: 1309 RKNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTTHGYEHDLNDYL 1130
            RK I    GCFLF P +L+GQKEG LP           +I+FFF +D   GY HDL DYL
Sbjct: 243  RKGITQAYGCFLFPPAVLIGQKEGILPSVDGHYLVENGRIKFFFANDPNAGYSHDLKDYL 302

Query: 1129 DYVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVTE--YSLLKTGFLSSDYPVSDSVFK 956
             YV K++V  K G V+ +E+  +RGDT+FFK+ DVT   Y +   G         D  FK
Sbjct: 303  KYVEKTYVDIKDG-VFAIELMQMRGDTMFFKITDVTAAMYHMKYRGM------KRDETFK 355

Query: 955  AMPIGQTDEVIVPLYWIVDGEVVVERKYLPKSLVSRSMEWLMRNKANALQYETLLNYIVS 776
             +P+ +   V+VPL+   +  + +    LP++LV +   ++M+NK   L    L NY+ +
Sbjct: 356  CIPLLKNSSVVVPLFSWDNRSLKITSGLLPRTLVEQGAAFIMKNKEKDLNVAVLKNYLSA 415

Query: 775  TNVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVKGAEEISLKQ 596
             N S  FNG QVR+G+K  P +++KLA+TL +RE+  R+++  I+S    +   + +LK 
Sbjct: 416  VNNSYIFNGSQVRDGVKIAPDLISKLAVTLYLREKVYRQRENSIISYFEQEMLHDPNLKA 475

Query: 595  LVKGVFEKVFGPV-SLKARVLKKLARWCG-VEYGEMKYDIDVLPLYVEIEDCIRLWRKGK 422
            +       V   + S+   + K L  W G  E+    +DI    LYVEI D  ++ +KG+
Sbjct: 476  MFGDFLWFVPNTLSSVWKNMRKSLMEWFGYAEFDLTTFDICDPVLYVEIVDRYKIIQKGR 535

Query: 421  LEGIESYDMEEEVKRGLDKKEDIKKLATELKGKI 320
            +   E +D  EE ++   ++++   LA ++  K+
Sbjct: 536  IPLGEFFDCHEECEKYELREKEKNDLAVKMAQKV 569


>gb|AUW36673.1| alpha a protein [Barley stripe mosaic virus]
          Length = 1138

 Score =  329 bits (844), Expect = 2e-94
 Identities = 199/574 (34%), Positives = 316/574 (55%), Gaps = 8/574 (1%)
 Frame = -2

Query: 2017 VNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKELVDVRRVLCSESINA 1838
            ++ E+V+ NL  TAS++  S LHDV+       +  ++     ++ VDVRR + SE +  
Sbjct: 11   ISREEVMGNLISTASSSVRSPLHDVLCSHVRTIVDSVDKKAVSRKHVDVRRNISSEELQM 70

Query: 1837 LSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVWDVGGNWLTNLKYWL 1658
            L + YPE+ V++S  E G+H+MAA  R LET Y+  ++P+K T V+D+GGN       W 
Sbjct: 71   LMNAYPEYAVSSSACESGTHSMAACFRFLETEYLLDMVPMKETFVYDIGGN-------WF 123

Query: 1657 TNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFARNGNIAP-DFFEAYTAVKTYEQQ 1481
            + +K+ +D  +HCCCP+L+ RD+ R + RM AM+ + R     P      Y  +   +  
Sbjct: 124  SRMKFRADREIHCCCPILSMRDSERLETRMMAMQKYMRGSKDKPLRLLSRYQNILREQAV 183

Query: 1480 RMELLNAGKPE--IAGNNHYCCNTFQTC-NWEPEGENMKVAMGVHSVHDMTLQDMADGLE 1310
            R     AG+    +     +C NTFQ C    PEG  +K A+ VHS++D+ +++ A  L+
Sbjct: 184  RTTAFTAGEVNAGVLDGEVFCENTFQDCVRRVPEG-FLKTAIAVHSIYDIKVEEFASALK 242

Query: 1309 RKNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTTHGYEHDLNDYL 1130
            RK I    GCFLF P +L+GQKEG LP           +I+FFF +D   GY HDL DYL
Sbjct: 243  RKGITQAYGCFLFPPAVLIGQKEGILPSVDGHYLVENGRIKFFFANDPNAGYSHDLKDYL 302

Query: 1129 DYVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVTE--YSLLKTGFLSSDYPVSDSVFK 956
             YV K++V  K G V+ +E+  +RGDT+FFK+ DVT   Y +   G         D  FK
Sbjct: 303  KYVEKTYVDIKDG-VFAIELMQMRGDTMFFKITDVTAAMYHMKYRGM------KRDETFK 355

Query: 955  AMPIGQTDEVIVPLYWIVDGEVVVERKYLPKSLVSRSMEWLMRNKANALQYETLLNYIVS 776
             +P+ +   V+VPL+   +  + +    LP++LV +   ++M+NK   L    L NY+ +
Sbjct: 356  CIPLLKNSSVVVPLFSWDNRSLKITSGLLPRTLVEQGAAFIMKNKEKDLNVAVLKNYLSA 415

Query: 775  TNVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVKGAEEISLKQ 596
             N S  FNG QVR+G+K  P +++KLA+TL +RE+  R+++  I+S    +   + +LK 
Sbjct: 416  VNNSYIFNGSQVRDGVKIAPDLISKLAVTLYLREKVYRQRENSIISYFEQEMLHDPNLKA 475

Query: 595  LVKGVFEKVFGPV-SLKARVLKKLARWCG-VEYGEMKYDIDVLPLYVEIEDCIRLWRKGK 422
            +       V   + S+   + K L  W G  E+    +DI    LYVEI D  ++ +KG+
Sbjct: 476  MFGDFLWFVPNTLSSVWKNMRKSLMEWFGYAEFDLTTFDICDPVLYVEIVDRYKIIQKGR 535

Query: 421  LEGIESYDMEEEVKRGLDKKEDIKKLATELKGKI 320
            +   E +D  EE ++   ++++   LA ++  K+
Sbjct: 536  IPLGEFFDCHEECEKYELREKEKNDLAVKMAQKV 569


>gb|AAA79147.1| alpha protein [Barley stripe mosaic virus]
          Length = 1138

 Score =  329 bits (843), Expect = 3e-94
 Identities = 199/574 (34%), Positives = 318/574 (55%), Gaps = 8/574 (1%)
 Frame = -2

Query: 2017 VNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKELVDVRRVLCSESINA 1838
            ++ E+V+ NL  TAS++  S LHDV+       +  ++     ++ VDVRR + SE +  
Sbjct: 11   ISREEVMGNLISTASSSVRSPLHDVLCSHVRTIVDSVDKKAVSRKHVDVRRNISSEELQM 70

Query: 1837 LSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVWDVGGNWLTNLKYWL 1658
            L + YPE+ V++S  E G+H+MAA  R LET Y+  ++P+K T V+D+GGNW +++K+  
Sbjct: 71   LINAYPEYAVSSSACESGTHSMAACFRFLETEYLLDMVPMKETFVYDIGGNWFSHMKF-- 128

Query: 1657 TNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFARNGNIAP-DFFEAYTAVKTYEQQ 1481
                  +D  +HCCCP+L+ RD+ R + RM AM+ + R     P      Y  +   +  
Sbjct: 129  -----RADREIHCCCPILSMRDSERLETRMMAMQKYMRGSKDKPLRLLSRYQNILREQAA 183

Query: 1480 RMELLNAGKPE--IAGNNHYCCNTFQTCNWE-PEGENMKVAMGVHSVHDMTLQDMADGLE 1310
            R     AG+    +   + +C NTFQ C  + PEG  +K A+ VHS++D+ +++ A  L+
Sbjct: 184  RTTAFMAGEVNAGVLDGDVFCENTFQDCVRQVPEGF-LKTAIAVHSIYDIKVEEFASALK 242

Query: 1309 RKNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTTHGYEHDLNDYL 1130
            RK I    GCFLF P +L+GQKEG LP           +I+FFF +D   GY HDL DYL
Sbjct: 243  RKGITQAYGCFLFPPAVLIGQKEGILPSVDGHYLVENGRIKFFFANDPNAGYSHDLKDYL 302

Query: 1129 DYVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVTE--YSLLKTGFLSSDYPVSDSVFK 956
             YV K++V  K G V+ +E+  +RGDT+FFK+ DVT   Y +   G         D  FK
Sbjct: 303  KYVEKTYVDIKDG-VFAIELMQMRGDTMFFKITDVTAAMYHMKYRGM------KRDETFK 355

Query: 955  AMPIGQTDEVIVPLYWIVDGEVVVERKYLPKSLVSRSMEWLMRNKANALQYETLLNYIVS 776
             +P+ +   V+VPL+   +  + +    LP++LV +   ++M+NK   L    L NY+ +
Sbjct: 356  CIPLLKNSSVVVPLFSWDNRSLKITSGLLPRTLVEQGAAFIMKNKEKDLNVAVLKNYLSA 415

Query: 775  TNVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVKGAEEISLKQ 596
             N S  FNG QVR+G+K  P +++KLA+TL +RE+  R+++  I+S    +   + +LK 
Sbjct: 416  VNNSYIFNGSQVRDGVKIAPDLISKLAVTLYLREKVYRQRENSIISYFEQEMLHDPNLKA 475

Query: 595  LVKGVFEKVFGPV-SLKARVLKKLARWCG-VEYGEMKYDIDVLPLYVEIEDCIRLWRKGK 422
            +       V   + S+   + K L  W G  E+    +DI    LYVEI D  ++ +KG+
Sbjct: 476  MFGDFLWFVPNTLSSVWKNMRKSLMEWFGYAEFDLTTFDICDPVLYVEIVDRYKIIQKGR 535

Query: 421  LEGIESYDMEEEVKRGLDKKEDIKKLATELKGKI 320
            +   E +D  EE +    ++++   LA ++  K+
Sbjct: 536  IPLGEFFDCHEECENYELREKEKNDLAVKMAQKV 569


>gb|AAA79146.1| alpha protein [Barley stripe mosaic virus]
          Length = 1138

 Score =  329 bits (843), Expect = 3e-94
 Identities = 199/574 (34%), Positives = 318/574 (55%), Gaps = 8/574 (1%)
 Frame = -2

Query: 2017 VNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKELVDVRRVLCSESINA 1838
            ++ E+V+ NL  TAS++  S LHDV+       +  ++     ++ VDVRR + SE +  
Sbjct: 11   ISREEVMGNLISTASSSVRSPLHDVLCSHVRTIVDSVDKKAVSRKHVDVRRNISSEELQM 70

Query: 1837 LSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVWDVGGNWLTNLKYWL 1658
            L + YPE+ V++S  E G+H+MAA  R LET Y+  ++P+K T V+D+GGNW +++K+  
Sbjct: 71   LINAYPEYAVSSSACESGTHSMAACFRFLETEYLLDMVPMKETFVYDIGGNWFSHMKF-- 128

Query: 1657 TNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFARNGNIAP-DFFEAYTAVKTYEQQ 1481
                  +D  +HCCCP+L+ RD+ R + RM AM+ + R     P      Y  +   +  
Sbjct: 129  -----RADREIHCCCPILSMRDSERLETRMMAMQKYMRGSKDKPLRLLSRYQNILREQAA 183

Query: 1480 RMELLNAGKPE--IAGNNHYCCNTFQTCNWE-PEGENMKVAMGVHSVHDMTLQDMADGLE 1310
            R     AG+    +   + +C NTFQ C  + PEG  +K A+ VHS++D+ +++ A  L+
Sbjct: 184  RTTAFMAGEVNAGVLDGDVFCENTFQDCVRQVPEGF-LKTAIAVHSIYDIKVEEFASALK 242

Query: 1309 RKNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTTHGYEHDLNDYL 1130
            RK I    GCFLF P +L+GQKEG LP           +I+FFF +D   GY HDL DYL
Sbjct: 243  RKGITQAYGCFLFPPAVLIGQKEGILPSVDGHYLVENGRIKFFFANDPNAGYSHDLKDYL 302

Query: 1129 DYVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVTE--YSLLKTGFLSSDYPVSDSVFK 956
             YV K++V  K G V+ +E+  +RGDT+FFK+ DVT   Y +   G         D  FK
Sbjct: 303  KYVEKTYVDIKDG-VFAIELMQMRGDTMFFKITDVTAAMYHMKYRGM------KRDETFK 355

Query: 955  AMPIGQTDEVIVPLYWIVDGEVVVERKYLPKSLVSRSMEWLMRNKANALQYETLLNYIVS 776
             +P+ +   V+VPL+   +  + +    LP++LV +   ++M+NK   L    L NY+ +
Sbjct: 356  CIPLLKNSSVVVPLFSWDNRSLKITSGLLPRTLVEQGAAFIMKNKEKDLNVAVLKNYLSA 415

Query: 775  TNVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVKGAEEISLKQ 596
             N S  FNG QVR+G+K  P +++KLA+TL +RE+  R+++  I+S    +   + +LK 
Sbjct: 416  VNNSYIFNGSQVRDGVKIAPDLISKLAVTLYLREKVYRQRENSIISYFEQEMLHDPNLKA 475

Query: 595  LVKGVFEKVFGPV-SLKARVLKKLARWCG-VEYGEMKYDIDVLPLYVEIEDCIRLWRKGK 422
            +       V   + S+   + K L  W G  E+    +DI    LYVEI D  ++ +KG+
Sbjct: 476  MFGDFLWFVPNTLSSVWKNMRKSLMEWFGYAEFDLTTFDICDPVLYVEIVDRYKIIQKGR 535

Query: 421  LEGIESYDMEEEVKRGLDKKEDIKKLATELKGKI 320
            +   E +D  EE +    ++++   LA ++  K+
Sbjct: 536  IPLGEFFDCHEECENYELREKEKNDLAVKMAQKV 569


>gb|AIT18335.1| alpha a protein [Barley stripe mosaic virus]
          Length = 1138

 Score =  328 bits (842), Expect = 4e-94
 Identities = 199/574 (34%), Positives = 317/574 (55%), Gaps = 8/574 (1%)
 Frame = -2

Query: 2017 VNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKELVDVRRVLCSESINA 1838
            ++ E+V+ NL  TAS++  S LHDV+       +  ++     ++ VDVRR + SE +  
Sbjct: 11   ISREEVMGNLISTASSSVRSPLHDVLCSHVRTIVDSVDKKAVNRKHVDVRRNISSEELQM 70

Query: 1837 LSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVWDVGGNWLTNLKYWL 1658
            L + YPE+ V++S  E G+H+MAA  R LET Y+  ++P+K T V+D+GGNW +++K+  
Sbjct: 71   LINAYPEYAVSSSACESGTHSMAACFRFLETEYLLDMVPMKETFVYDIGGNWFSHMKF-- 128

Query: 1657 TNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFARNGNIAP-DFFEAYTAVKTYEQQ 1481
                  +D  +HCCCP+L+ RD+ R + RM AM+ + R     P      Y  +   +  
Sbjct: 129  -----RADREIHCCCPILSMRDSERLETRMMAMQKYMRGSKDKPLRLLSRYQNILREQAA 183

Query: 1480 RMELLNAGKPE--IAGNNHYCCNTFQTCNWE-PEGENMKVAMGVHSVHDMTLQDMADGLE 1310
            R     AG+    +     +C NTFQ C  + PEG  +K A+ VHS++D+ +++ A  L+
Sbjct: 184  RTTAFMAGEVNAGVLDGEVFCENTFQDCVRQVPEGF-LKTAIAVHSIYDIKVEEFASALK 242

Query: 1309 RKNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTTHGYEHDLNDYL 1130
            RK I    GCFLF P +L+GQKEG LP           +I+FFF +D   GY HDL DYL
Sbjct: 243  RKGITQAYGCFLFPPAVLIGQKEGILPSVDGHYLVENGRIKFFFANDPNAGYSHDLKDYL 302

Query: 1129 DYVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVTE--YSLLKTGFLSSDYPVSDSVFK 956
             YV K++V  K G V+ +E+  +RGDT+FFK+ DVT   Y +   G         D  FK
Sbjct: 303  KYVEKTYVDIKDG-VFAIELMQMRGDTMFFKITDVTAAMYHMKYRGM------KRDETFK 355

Query: 955  AMPIGQTDEVIVPLYWIVDGEVVVERKYLPKSLVSRSMEWLMRNKANALQYETLLNYIVS 776
             +P+ +   V+VPL+   +  + +    LP++LV +   ++M+NK   L    L NY+ +
Sbjct: 356  CIPLLKNSSVVVPLFSWDNRSLKITSGLLPRTLVEQGAAFIMKNKEKDLNVAVLKNYLSA 415

Query: 775  TNVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVKGAEEISLKQ 596
             N S  FNG QVR+G+K  P +++KLA+TL +RE+  R+++  I+S    +   + +LK 
Sbjct: 416  VNNSYIFNGSQVRDGVKIAPDLISKLAVTLYLREKVYRQRENSIISYFEQEMLHDPNLKA 475

Query: 595  LVKGVFEKVFGPV-SLKARVLKKLARWCG-VEYGEMKYDIDVLPLYVEIEDCIRLWRKGK 422
            +       V   + S+   + K L  W G  E+    +DI    LYVEI D  ++ +KG+
Sbjct: 476  MFGDFLWFVPNTLSSVWKNMRKSLMEWFGYAEFDLTTFDICDPVLYVEIVDRYKIIQKGR 535

Query: 421  LEGIESYDMEEEVKRGLDKKEDIKKLATELKGKI 320
            +   E +D  EE +    ++++   LA ++  K+
Sbjct: 536  IPLGEFFDCHEECENYELREKEKNDLAVKMAQKV 569


>gb|AHY22367.1| alpha protein [Barley stripe mosaic virus]
          Length = 1139

 Score =  328 bits (842), Expect = 4e-94
 Identities = 208/614 (33%), Positives = 329/614 (53%), Gaps = 18/614 (2%)
 Frame = -2

Query: 2017 VNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKELVDVRRVLCSESINA 1838
            ++ E+V+ NL  TAS++  S LHDV+       +  ++     ++ VDVRR + SE +  
Sbjct: 11   ISREEVMGNLISTASSSVRSPLHDVLCSHVRTIVDSVDKKAVSRKHVDVRRNISSEELQM 70

Query: 1837 LSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVWDVGGNWLTNLKYWL 1658
            L + YPE+ V++S  E G+H+MAA  R LET Y+  ++P+K T V+D+GGNW +++K+  
Sbjct: 71   LINAYPEYAVSSSACESGTHSMAACFRFLETEYLLDMVPMKDTFVYDIGGNWFSHMKF-- 128

Query: 1657 TNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFARNGNIAP-DFFEAYTAVKTYEQQ 1481
                  +D  +HCCCP+L+ RD+ R + RM AM+ + R     P      Y  +   +  
Sbjct: 129  -----RADREIHCCCPILSMRDSERLETRMMAMQKYMRGSKDKPLRLLSRYQNILREQAA 183

Query: 1480 RMELLNAGKPE--IAGNNHYCCNTFQTCNWE-PEGENMKVAMGVHSVHDMTLQDMADGLE 1310
            R     AG+    +     +C NTFQ C  E PEG  +K A+ VHS++D+ +++ A  L+
Sbjct: 184  RATAFVAGEVNAGVLDGEVFCENTFQDCVREVPEGF-LKTAIAVHSIYDIKVEEFASALK 242

Query: 1309 RKNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTTHGYEHDLNDYL 1130
            RK I    GCFLF P +L+GQKEG LP           +I+FFF +D   GY HDL DYL
Sbjct: 243  RKGITQAYGCFLFPPAVLIGQKEGILPSVDGHYLVENGRIKFFFANDPNAGYSHDLKDYL 302

Query: 1129 DYVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVTE--YSLLKTGFLSSDYPVSDSVFK 956
             YV K++V  K G V+ +E+  +RGDT+FFK+ DVT   Y +   G         D  FK
Sbjct: 303  KYVEKAYVDIKDG-VFAIELMQMRGDTMFFKITDVTAAMYHMKYRGM------KRDETFK 355

Query: 955  AMPIGQTDEVIVPLYWIVDGEVVVERKYLPKSLVSRSMEWLMRNKANALQYETLLNYIVS 776
             +P+ +   V+VPL+   +  + +    LP++LV +   ++M+NK   L    L NY+ +
Sbjct: 356  CIPMLKNSSVVVPLFSWDNHSLKITSGLLPRTLVEQGAAFIMKNKEKDLNVAVLKNYLSA 415

Query: 775  TNVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVKGAEEISLKQ 596
             N S  FNG QVR+G+K  P +++KLA+TL +RE+  R+++  I+S    +   + +LK 
Sbjct: 416  VNNSYIFNGSQVRDGVKIAPDLISKLAVTLFLREKVYRQRENSIISHFEQEMLRDPNLKA 475

Query: 595  LVKGVFEKVFGPV-SLKARVLKKLARWCG-VEYGEMKYDIDVLPLYVEIEDCIRLWRKGK 422
            +       V   + S+   + K L  W G  ++    +DI    LYVEI D  ++ +KG+
Sbjct: 476  MFGDFLWFVPNTLSSVWKNMRKSLMEWFGYADFDLTTFDICDPVLYVEIVDRYKIIQKGR 535

Query: 421  LEGIESYDMEEEVK----RGLDKKEDIKKLATELKGKIXXXXXXXXXXX*K------KLV 272
            +   E +D  EE +    R  +K +   K+A ++ G +                   +L+
Sbjct: 536  IPLGEFFDCHEECENYELREKEKNDLAVKMAQKVTGTVTECEKDEGHLVQPTKQILVQLM 595

Query: 271  AAHILCALCGRETP 230
              HI+ ALC   +P
Sbjct: 596  MPHIVRALCKPRSP 609


>gb|AAA79145.1| alpha protein [Barley stripe mosaic virus]
          Length = 1139

 Score =  327 bits (839), Expect = 1e-93
 Identities = 198/574 (34%), Positives = 317/574 (55%), Gaps = 8/574 (1%)
 Frame = -2

Query: 2017 VNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKELVDVRRVLCSESINA 1838
            ++ E+V+ NL  TAS++  S LHDV+       +  ++     ++ VDVRR + SE +  
Sbjct: 11   ISREEVMGNLISTASSSVRSPLHDVLCSHVRTIVDSVDKKAVSRKHVDVRRNISSEELQM 70

Query: 1837 LSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVWDVGGNWLTNLKYWL 1658
            L + YPE+ V++S  E G+H+MAA  R LET Y+  ++P+K T V+D+GGN       W 
Sbjct: 71   LINAYPEYAVSSSACESGTHSMAACFRFLETEYLLDMVPMKETFVYDIGGN-------WF 123

Query: 1657 TNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFARNGNIAP-DFFEAYTAVKTYEQQ 1481
            +++K+ +D  +HCCCP+L+ RD+ R + RM AM+ + R     P      Y  +   +  
Sbjct: 124  SHMKFRADREIHCCCPILSMRDSERLETRMMAMQKYMRGSKDKPLRLLSRYQNILREQAA 183

Query: 1480 RMELLNAGKPE--IAGNNHYCCNTFQTC-NWEPEGENMKVAMGVHSVHDMTLQDMADGLE 1310
            R     AG+ +  +     +C NTFQ C    PEG  +K A+ VHS++D+ +++ A  L+
Sbjct: 184  RTTAFMAGEVDAGVLDGEVFCENTFQDCVRRVPEG-FLKTAIAVHSIYDIKVEEFASALK 242

Query: 1309 RKNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTTHGYEHDLNDYL 1130
            RK I    GCFLF P +L+GQKEG LP           +I+FFF +D   GY HDL DYL
Sbjct: 243  RKGITQAYGCFLFPPAVLIGQKEGILPSVDGHYLVENGRIKFFFANDPNAGYSHDLKDYL 302

Query: 1129 DYVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVTE--YSLLKTGFLSSDYPVSDSVFK 956
             YV K++V  + G V+ +E+  +RGDT+FFK+ DVT   Y +   G         D  FK
Sbjct: 303  KYVEKTYVDIEDG-VFAIELMQMRGDTMFFKITDVTAAMYHMKYRGM------KRDETFK 355

Query: 955  AMPIGQTDEVIVPLYWIVDGEVVVERKYLPKSLVSRSMEWLMRNKANALQYETLLNYIVS 776
             +P+ +   V+VPL+   +  + +    LP++LV +   ++M+NK   L    L NY+ +
Sbjct: 356  CIPLLKNSSVVVPLFSWDNRSLKITSGLLPRTLVEQGAAFIMKNKEKDLNVAVLKNYLSA 415

Query: 775  TNVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVKGAEEISLKQ 596
             N S  FNG QVR+G+K  P +++KLA+TL +RE+  R+++  I+S    +   + +LK 
Sbjct: 416  VNNSYIFNGSQVRDGVKIAPDLISKLAVTLYLREKVYRQRENSIISYFEQEMLHDPNLKA 475

Query: 595  LVKGVFEKVFGPV-SLKARVLKKLARWCG-VEYGEMKYDIDVLPLYVEIEDCIRLWRKGK 422
            +       V   + S+   + K L  W G  E+    +DI    LYVEI D  ++ +KG+
Sbjct: 476  MFGDFLWFVPNTLSSVWKNMRKSLMEWFGYAEFDLTTFDICDPVLYVEIVDRYKIIQKGR 535

Query: 421  LEGIESYDMEEEVKRGLDKKEDIKKLATELKGKI 320
            +   E +D  EE +    ++++   LA ++  K+
Sbjct: 536  IPLGEFFDCHEECENYELREKEKNDLAVKMAQKV 569


>gb|AEP04414.1| alpha protein [Barley stripe mosaic virus]
          Length = 1139

 Score =  327 bits (839), Expect = 1e-93
 Identities = 198/574 (34%), Positives = 317/574 (55%), Gaps = 8/574 (1%)
 Frame = -2

Query: 2017 VNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKELVDVRRVLCSESINA 1838
            ++ E+V+ NL  TAS++  S LHDV+       +  ++     ++ VDVRR + SE +  
Sbjct: 11   ISREEVMGNLISTASSSVRSPLHDVLCSHVRTIVDSVDKKAVSRKHVDVRRNISSEELQM 70

Query: 1837 LSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVWDVGGNWLTNLKYWL 1658
            L + YPE+ V++S  E G+H+MAA  R LET Y+  ++P+K T V+D+GGN       W 
Sbjct: 71   LINAYPEYAVSSSACESGTHSMAACFRFLETEYLLDMVPMKETFVYDIGGN-------WF 123

Query: 1657 TNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFARNGNIAP-DFFEAYTAVKTYEQQ 1481
            +++K+ +D  +HCCCP+L+ RD+ R + RM AM+ + R     P      Y  +   +  
Sbjct: 124  SHMKFRADREIHCCCPILSMRDSERLETRMMAMQKYMRGSKDKPLRLLSRYQNILREQAA 183

Query: 1480 RMELLNAGKPE--IAGNNHYCCNTFQTC-NWEPEGENMKVAMGVHSVHDMTLQDMADGLE 1310
            R     AG+ +  +     +C NTFQ C    PEG  +K A+ VHS++D+ +++ A  L+
Sbjct: 184  RTTAFMAGEVDAGVLDGEVFCENTFQDCVRRVPEG-FLKTAIAVHSIYDIKVEEFASALK 242

Query: 1309 RKNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTTHGYEHDLNDYL 1130
            RK I    GCFLF P +L+GQKEG LP           +I+FFF +D   GY HDL DYL
Sbjct: 243  RKGITQAYGCFLFPPAVLIGQKEGILPSVDGHYLVENGRIKFFFANDPNAGYSHDLKDYL 302

Query: 1129 DYVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVTE--YSLLKTGFLSSDYPVSDSVFK 956
             YV K++V  + G V+ +E+  +RGDT+FFK+ DVT   Y +   G         D  FK
Sbjct: 303  KYVEKTYVDIEDG-VFAIELMQMRGDTMFFKITDVTAAMYHMKYRGM------KRDETFK 355

Query: 955  AMPIGQTDEVIVPLYWIVDGEVVVERKYLPKSLVSRSMEWLMRNKANALQYETLLNYIVS 776
             +P+ +   V+VPL+   +  + +    LP++LV +   ++M+NK   L    L NY+ +
Sbjct: 356  CIPLLKNSSVVVPLFSWDNRSLKITSGLLPRTLVEQGAAFIMKNKEKDLNVAVLKNYLSA 415

Query: 775  TNVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVKGAEEISLKQ 596
             N S  FNG QVR+G+K  P +++KLA+TL +RE+  R+++  I+S    +   + +LK 
Sbjct: 416  VNNSYIFNGSQVRDGVKIAPDLISKLAVTLYLREKVYRQRENSIISYFEQEMLHDPNLKA 475

Query: 595  LVKGVFEKVFGPV-SLKARVLKKLARWCG-VEYGEMKYDIDVLPLYVEIEDCIRLWRKGK 422
            +       V   + S+   + K L  W G  E+    +DI    LYVEI D  ++ +KG+
Sbjct: 476  MFGDFLWFVPNTLSSVWKNMRKSLMEWFGYAEFDLTTFDICDPVLYVEIVDRYKIIQKGR 535

Query: 421  LEGIESYDMEEEVKRGLDKKEDIKKLATELKGKI 320
            +   E +D  EE +    ++++   LA ++  K+
Sbjct: 536  IPLGEFFDCHEECENYELREKEKNDLAVKMAQKV 569


>gb|AUW36693.1| alpha a protein [Barley stripe mosaic virus]
          Length = 1138

 Score =  325 bits (834), Expect = 5e-93
 Identities = 198/574 (34%), Positives = 315/574 (54%), Gaps = 8/574 (1%)
 Frame = -2

Query: 2017 VNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKELVDVRRVLCSESINA 1838
            ++ E+V+ NL  TAS++  S LHDV+       +  ++     ++ VDVRR + SE +  
Sbjct: 11   ISREEVMGNLISTASSSVRSPLHDVLCSHVRTIVDSVDKKAVSRKHVDVRRNISSEELQM 70

Query: 1837 LSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVWDVGGNWLTNLKYWL 1658
            L + YPE+ V++S  E G+H+MAA  R LET Y+  ++P+K T V+D+GGN       W 
Sbjct: 71   LMNAYPEYAVSSSACESGTHSMAACFRFLETEYLLDMVPMKETFVYDIGGN-------WF 123

Query: 1657 TNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFARNGNIAP-DFFEAYTAVKTYEQQ 1481
            +++K+ +D  +HCCCP+L+ RD+ R + RM AM+ + R     P      Y  +   +  
Sbjct: 124  SHMKFRADREIHCCCPILSMRDSERLETRMMAMQKYMRGSKDKPLRLLSRYQNILREQAV 183

Query: 1480 RMELLNAGKPE--IAGNNHYCCNTFQTC-NWEPEGENMKVAMGVHSVHDMTLQDMADGLE 1310
            R     AG+    +     +C NTFQ C    PEG  +K A+ VHS++D+ +++ A  L+
Sbjct: 184  RTTAFTAGEVNAGVLDGEVFCENTFQDCVRRVPEG-FLKTAIAVHSIYDIKVEEFASALK 242

Query: 1309 RKNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTTHGYEHDLNDYL 1130
            RK I    GCFL  P +L+GQKEG LP           +I+FFF +D   GY HDL DYL
Sbjct: 243  RKGITQAYGCFLSPPAVLIGQKEGILPSVDGHYLVENGRIKFFFANDPNAGYSHDLKDYL 302

Query: 1129 DYVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVTE--YSLLKTGFLSSDYPVSDSVFK 956
             YV K++V  K G V+ +E+  +RGDT+FFK+ DVT   Y +   G         D  FK
Sbjct: 303  KYVEKTYVDIKDG-VFAIELMQMRGDTMFFKITDVTAAMYHMKYRGM------KRDETFK 355

Query: 955  AMPIGQTDEVIVPLYWIVDGEVVVERKYLPKSLVSRSMEWLMRNKANALQYETLLNYIVS 776
             +P+ +   V+VPL+   +  + +    LP++LV +   ++M+NK   L    L NY+ +
Sbjct: 356  CIPLLKNSSVVVPLFSWDNRSLKITSGLLPRTLVEQGAAFIMKNKEKDLNVAVLKNYLSA 415

Query: 775  TNVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVKGAEEISLKQ 596
             N S  FNG QVR+G+K  P +++KLA+TL +RE+  R+++  I+S    +   + +LK 
Sbjct: 416  VNNSYIFNGSQVRDGVKIAPDLISKLAVTLYLREKVYRQRENSIISYFEQEMLHDPNLKA 475

Query: 595  LVKGVFEKVFGPV-SLKARVLKKLARWCG-VEYGEMKYDIDVLPLYVEIEDCIRLWRKGK 422
            +       V   + S+   + K L  W G  E+    +DI    LYVEI D  +  +KG+
Sbjct: 476  MFGDFLWFVPNTLSSVWKNMRKSLMEWFGYAEFDLTTFDICDPVLYVEIVDRYKTIQKGR 535

Query: 421  LEGIESYDMEEEVKRGLDKKEDIKKLATELKGKI 320
            +   E +D  EE ++   ++++   LA ++  K+
Sbjct: 536  IPLGEFFDCHEECEKYELREKEKNDLAVKMAQKV 569


>gb|ATO98263.1| alpha A protein [Lychnis ringspot virus]
          Length = 1141

 Score =  325 bits (834), Expect = 5e-93
 Identities = 199/574 (34%), Positives = 311/574 (54%), Gaps = 9/574 (1%)
 Frame = -2

Query: 2017 VNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKELVDVRRVLCSESINA 1838
            ++ E+V+ NL  TAS +  S LHDV+       +  +E     +  +DVRR L S+ +  
Sbjct: 11   ISREEVMGNLISTASASVRSPLHDVLCTHVGTVINSVEKKCAGRRQIDVRRNLTSDELQT 70

Query: 1837 LSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVWDVGGNWLTNLKYWL 1658
            L   YPE+++ +S  E G+H+MAA  R LET Y+   +P + T++WD+GGN       W 
Sbjct: 71   LIKDYPEYSIVSSACESGTHSMAACYRFLETEYLLDFVPKRETMIWDIGGN-------WF 123

Query: 1657 TNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFAR-NGNIAPDFFEAYTAVKTYEQQ 1481
            +++K+ SD  +HCCCP+L+ RD+ R + R   M+ F R +   +   F  Y ++   EQ+
Sbjct: 124  SHMKFRSDLNIHCCCPILSLRDSERFETRCMNMQRFMRGDREKSLQLFTKYLSI-LKEQE 182

Query: 1480 RMELL---NAGKPEIAGNNHYCCNTFQTC-NWEPEGENMKVAMGVHSVHDMTLQDMADGL 1313
            R +L    N   P+      +C NTFQ C    PEG ++  A+ VHS +D++++ +    
Sbjct: 183  RRKLCFARNDVTPQQLDGEVFCENTFQECVRVAPEG-HLATAIAVHSCYDISVESLVSSC 241

Query: 1312 ERKNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTTHGYEHDLNDY 1133
            +RK I    GC LF P +L+GQKEGDLP           KI FFF +D   GY HDL+DY
Sbjct: 242  KRKGITQMYGCMLFPPSILIGQKEGDLPFVKGKFKIEKGKISFFFLNDPNAGYTHDLSDY 301

Query: 1132 LDYVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVT--EYSLLKTGFLSSDYPVSDSVF 959
            L Y  K+++   +G ++ +E+  +RGDT+FFK+ DVT   Y L   G         D +F
Sbjct: 302  LKYFEKTYIDVPEG-IFSIELLQMRGDTMFFKITDVTAAAYHLKYRGI------KFDDIF 354

Query: 958  KAMPIGQTDEVIVPLYWIVDGEVVVERKYLPKSLVSRSMEWLMRNKANALQYETLLNYIV 779
            K +P+     V+VP++   +  + V    LP+++V +   + M+NK   L    L NY+ 
Sbjct: 355  KCVPMNAQTSVVVPVFSWDNSGLSVSSALLPRNIVEQGASYAMKNKEKDLTVSVLKNYLS 414

Query: 778  STNVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVKGAEEISLK 599
            S N S  FNG QVR+G K +P +L++LA+T+ +RE+  R ++ KI+        E++SLK
Sbjct: 415  SVNNSYIFNGSQVRQGEKVNPSLLSQLAVTIFLREKVYRVRETKIVDHFEHLFKEDVSLK 474

Query: 598  QLVKGVF--EKVFGPVSLKARVLKKLARWCGVEYGEMKYDIDVLPLYVEIEDCIRLWRKG 425
            +L  GV   + V        +V   LARW G+      +DI   PLY EI+D   +  +G
Sbjct: 475  ELFGGVVWGKNVKMVCDFYRKVKMDLARWFGLSVDPHAFDICDPPLYQEIKDRWEVNVRG 534

Query: 424  KLEGIESYDMEEEVKRGLDKKEDIKKLATELKGK 323
            ++     ++ EEEV+    +  + K LA  +  K
Sbjct: 535  EIPLSSFFNCEEEVEACEARIVERKLLAESIVNK 568


>ref|YP_009047251.1| putative methyltransferase/helicase [Gentian ovary ringspot virus]
 dbj|BAP18642.1| putative methyltransferase/helicase [Gentian ovary ringspot virus]
          Length = 1194

 Score =  326 bits (836), Expect = 6e-93
 Identities = 194/617 (31%), Positives = 336/617 (54%), Gaps = 49/617 (7%)
 Frame = -2

Query: 2035 DMIDLYVNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKELVDVRRVLC 1856
            +M+   ++ E V+  +  TA++ T S LH   +D  A  ++ +  T   K+ +DVRR + 
Sbjct: 6    EMMKNMLSSEAVINAVVTTAASNTRSPLHQEFSDYYATTIRGMTKTNQTKKTIDVRRTMS 65

Query: 1855 SESINALSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVWDVGGNWLT 1676
              ++  LS+LYPE+NV +S  E G+H++AA CR LET  +  +LP K T VWD+GGNW+T
Sbjct: 66   PTTLQELSNLYPEYNVVSSGTESGTHSVAAACRKLETQLLLDMLPKKQTFVWDIGGNWVT 125

Query: 1675 NLKYWLTNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFARN-GNIAPDFFEAYTAV 1499
            ++K  L     + +P +HCCCP+L+ RDA RK+ R   +E FAR      P+F   Y  V
Sbjct: 126  HMKKNL-----NDEPRIHCCCPILDARDAERKRTRFTNLERFARGLDKQTPEFKCDYEKV 180

Query: 1498 KTYEQQRMELLNAG--KPEIAGNNHYCCNTFQTCNWEP---EGEN-MKVAMGVHSVHDMT 1337
            K   ++    L  G    E      +C NTF+ C W+P   +GE+ ++ A+ +HS++D+ 
Sbjct: 181  KMDNERIKRALKRGDLSVEAMHGETFCQNTFEKCVWDPKTKDGESGLRYAVAIHSIYDIK 240

Query: 1336 LQDMADGLERKNIKHFIGCFLFSPKLLLGQK--EG----------------------DLP 1229
            L+D+   +E+K I+    CFLFSP +LLG++  EG                      +  
Sbjct: 241  LKDLVTAMEKKGIQQTFCCFLFSPYMLLGEECSEGAVHDVSVGGPLLFTGGRYCVLKNKT 300

Query: 1228 XXXXXXXXXXXKIRFFFTDDTTHGYEHDLNDYLDYVRKSFVVAKKGHVYMLEIFGVRGDT 1049
                       ++RF+F+DD   GYEHD + YL+Y+RK FV++    ++ LE+  +RGDT
Sbjct: 301  KSMTHGLIGRDRVRFWFSDDPNMGYEHDYDSYLEYIRKGFVLSDDDTLFSLELMQIRGDT 360

Query: 1048 LFFKLYDVTEYSLLKTGFLS-----------SDYPVSDSV--FKAMPIGQTDEVIVPLYW 908
            +F K+ DV+EY    TG ++           +   +S+++  FK +P+ Q  + ++P+Y 
Sbjct: 361  MFLKITDVSEYQATLTGTMNVNGLRCGRDICNGDLLSENINGFKCIPVPQNADCLMPVYR 420

Query: 907  IVDGEVVVERKY--LPKSLVSRSMEWLMRNKANALQYETLLNYIVSTNVSAAFNGCQVRE 734
            + +    ++ K   +P  L  R  E+LMR     +  ++  + + S N S  FNG  VR 
Sbjct: 421  LNENSDTLDMKIVRIPNVLRKRIEEYLMRLNQGKMDLQSAKSMLASINNSIVFNGTHVRV 480

Query: 733  GLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVKGAEEISLKQLVKGVF--EKVFGP 560
                +P +LA +A+T+  RE F R+++++++  L++   ++I +   V G F  +KV+  
Sbjct: 481  VDSVEPSLLADIAVTVTAREIFKRKEEEELMQQLKLHSKKDIGICD-VLGYFWKKKVWPK 539

Query: 559  VSLKARVLKKLARWCGVEYGEMKYDIDVLPLYVEIEDCIRLWRKGKLEGIE-SYDMEEEV 383
              +  + LK L++  G  +G+  ++I  LPL++ +E  +  W K   + +E  Y+M+ EV
Sbjct: 540  RGVYHKSLKWLSKLMGYNFGQDLFNIGDLPLFIPVESAVSAWYKSYQDEVEHMYNMDAEV 599

Query: 382  KRGLDKKEDIKKLATEL 332
            ++     +DI+K+  ++
Sbjct: 600  EKYNAMSDDIRKVTEKI 616


>gb|AAA19829.1| alpha protein [Barley stripe mosaic virus]
          Length = 1138

 Score =  325 bits (832), Expect = 1e-92
 Identities = 198/574 (34%), Positives = 314/574 (54%), Gaps = 8/574 (1%)
 Frame = -2

Query: 2017 VNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKELVDVRRVLCSESINA 1838
            ++ E+V+ NL  TAS++  S LHDV+       +  +E     ++ VDVRR + SE +  
Sbjct: 11   ISREEVMGNLISTASSSVRSPLHDVLCSHVRTIVDSVEKKAVSRKHVDVRRNISSEELQM 70

Query: 1837 LSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVWDVGGNWLTNLKYWL 1658
            L + YPE+ V++S  E G+H+MAA  R LET Y+  ++P+K T V+D+GGN       W 
Sbjct: 71   LINAYPEYAVSSSACESGTHSMAACFRFLETEYLLDMVPMKETFVYDIGGN-------WF 123

Query: 1657 TNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFARNGNIAP-DFFEAYTAVKTYEQQ 1481
            +++K+ +D  +HCCCP+L+ RD+ R + RM AM+ + R     P      Y  +   +  
Sbjct: 124  SHMKFRADREIHCCCPILSMRDSERLETRMMAMQKYMRGSKDKPLRLLSRYQNILREQAA 183

Query: 1480 RMELLNAGKPEIA--GNNHYCCNTFQTC-NWEPEGENMKVAMGVHSVHDMTLQDMADGLE 1310
            R     AG           +C NTFQ C    PEG  +K A+ VHS++D+ +++ A  L+
Sbjct: 184  RTTAFMAGDVNAGDLDGEVFCENTFQDCVRRVPEG-FLKTAIAVHSIYDIKVEEFASALK 242

Query: 1309 RKNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTTHGYEHDLNDYL 1130
            RK I    GCFLF P +L+GQKEG LP           +I+FFF +D   GY HDL DYL
Sbjct: 243  RKGITQAYGCFLFPPAVLIGQKEGILPSVDGHYLVENGRIKFFFANDPNAGYSHDLKDYL 302

Query: 1129 DYVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVTE--YSLLKTGFLSSDYPVSDSVFK 956
             YV K++V  + G V+ +E+  +RGDT+FFK+ DVT   Y +   G         D  FK
Sbjct: 303  KYVEKAYVDIEDG-VFAIELMQMRGDTMFFKITDVTAAMYHMKYRGM------KRDETFK 355

Query: 955  AMPIGQTDEVIVPLYWIVDGEVVVERKYLPKSLVSRSMEWLMRNKANALQYETLLNYIVS 776
             +P+ +   V+VPL+   +  + +    LP++LV +   ++M+NK   L    L NY+ +
Sbjct: 356  CIPLLKNSSVVVPLFSWDNRSLKITSGLLPRTLVEQGAAFIMKNKEKDLNVAVLKNYLSA 415

Query: 775  TNVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVKGAEEISLKQ 596
             N S  FNG QVR+G+K  P +++KLA+TL +RE+  R+++  I+S    +   + +LK 
Sbjct: 416  VNNSYIFNGSQVRDGVKIAPDLISKLAVTLYLREKVYRQRENSIISYFEQEMLHDPNLKA 475

Query: 595  LVKGVFEKVFGPV-SLKARVLKKLARWCG-VEYGEMKYDIDVLPLYVEIEDCIRLWRKGK 422
            +       V   + S+   + K L  W G  ++    +DI    LYVEI D  ++ +KG+
Sbjct: 476  MFGDFLWFVPNTLSSVWKNMRKSLMEWFGYADFDLTTFDICDPVLYVEIVDRYKIIQKGR 535

Query: 421  LEGIESYDMEEEVKRGLDKKEDIKKLATELKGKI 320
            +   E +D  EE +    ++++   LA ++  K+
Sbjct: 536  IPLGEFFDCHEECENYELREKEKNDLAAKMAQKV 569


>ref|NP_604474.1| alpha protein [Barley stripe mosaic virus]
 sp|P17595.1|ALPHA_BSMV RecName: Full=Alpha-A protein; Includes: RecName:
            Full=Methyltransferase; Includes: RecName:
            Full=NTPase/helicase
 gb|AAA46336.1| alpha protein [Barley stripe mosaic virus]
          Length = 1139

 Score =  325 bits (832), Expect = 1e-92
 Identities = 197/574 (34%), Positives = 316/574 (55%), Gaps = 8/574 (1%)
 Frame = -2

Query: 2017 VNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKELVDVRRVLCSESINA 1838
            ++ E+V+ NL  TAS++  S LHDV+       +  ++     ++  DVRR + SE +  
Sbjct: 11   ISREEVMGNLISTASSSVRSPLHDVLCSHVRTIVDSVDKKAVSRKHEDVRRNISSEELQM 70

Query: 1837 LSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVWDVGGNWLTNLKYWL 1658
            L + YPE+ V++S  E G+H+MAA  R LET Y+  ++P+K T V+D+GGN       W 
Sbjct: 71   LINAYPEYAVSSSACESGTHSMAACFRFLETEYLLDMVPMKETFVYDIGGN-------WF 123

Query: 1657 TNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFARNGNIAP-DFFEAYTAVKTYEQQ 1481
            +++K+ +D  +HCCCP+L+ RD+ R + RM AM+ + R     P      Y  +   +  
Sbjct: 124  SHMKFRADREIHCCCPILSMRDSERLETRMMAMQKYMRGSKDKPLRLLSRYQNILREQAA 183

Query: 1480 RMELLNAGKPE--IAGNNHYCCNTFQTC-NWEPEGENMKVAMGVHSVHDMTLQDMADGLE 1310
            R     AG+    +   + +C NTFQ C    PEG  +K A+ VHS++D+ +++ A  L+
Sbjct: 184  RTTAFMAGEVNAGVLDGDVFCENTFQDCVRRVPEG-FLKTAIAVHSIYDIKVEEFASALK 242

Query: 1309 RKNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTTHGYEHDLNDYL 1130
            RK I    GCFLF P +L+GQKEG LP           +I+FFF +D   GY HDL DYL
Sbjct: 243  RKGITQAYGCFLFPPAVLIGQKEGILPSVDGHYLVENGRIKFFFANDPNAGYSHDLKDYL 302

Query: 1129 DYVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVTE--YSLLKTGFLSSDYPVSDSVFK 956
             YV K++V  + G V+ +E+  +RGDT+FFK+ DVT   Y +   G         D  FK
Sbjct: 303  KYVEKTYVDIEDG-VFAIELMQMRGDTMFFKITDVTAAMYHMKYRGM------KRDETFK 355

Query: 955  AMPIGQTDEVIVPLYWIVDGEVVVERKYLPKSLVSRSMEWLMRNKANALQYETLLNYIVS 776
             +P+ +   V+VPL+   +  + +    LP++LV +   ++M+NK   L    L NY+ +
Sbjct: 356  CIPLLKNSSVVVPLFSWDNRSLKITSGLLPRTLVEQGAAFIMKNKEKDLNVAVLKNYLSA 415

Query: 775  TNVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVKGAEEISLKQ 596
             N S  FNG QVR+G+K  P +++KLA+TL +RE+  R+++  I+S    +   + +LK 
Sbjct: 416  VNNSYIFNGSQVRDGVKIAPDLISKLAVTLYLREKVYRQRENSIISYFEQEMLHDPNLKA 475

Query: 595  LVKGVFEKVFGPV-SLKARVLKKLARWCG-VEYGEMKYDIDVLPLYVEIEDCIRLWRKGK 422
            +       V   + S+   + K L  W G  E+    +DI    LYVEI D  ++ +KG+
Sbjct: 476  MFGDFLWFVPNTLSSVWKNMRKSLMEWFGYAEFDLTTFDICDPVLYVEIVDRYKIIQKGR 535

Query: 421  LEGIESYDMEEEVKRGLDKKEDIKKLATELKGKI 320
            +   E +D  EE +    ++++   LA ++  K+
Sbjct: 536  IPLGEFFDCHEECENYELREKEKNDLAVKMAQKV 569


>gb|AUW36674.1| alpha a protein [Barley stripe mosaic virus]
          Length = 1138

 Score =  324 bits (830), Expect = 2e-92
 Identities = 197/574 (34%), Positives = 315/574 (54%), Gaps = 8/574 (1%)
 Frame = -2

Query: 2017 VNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKELVDVRRVLCSESINA 1838
            ++ E+V+ NL  TAS++  S LHDV+       +  ++     ++ VDVRR + SE +  
Sbjct: 11   ISREEVMGNLISTASSSVRSPLHDVLCSHVRTIVDSVDKKAVSRKHVDVRRNISSEELQM 70

Query: 1837 LSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVWDVGGNWLTNLKYWL 1658
            L + YPE+ V++S  E G+H+MAA  R LET Y+  ++P+K T V+D+GGN       W 
Sbjct: 71   LINAYPEYAVSSSACESGTHSMAACFRFLETEYLLDMVPMKETFVYDIGGN-------WF 123

Query: 1657 TNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFARNGNIAP-DFFEAYTAVKTYEQQ 1481
            +++K+ +D  +HCCCP+L+ RD+ R + RM AM+ + R     P      Y  +   +  
Sbjct: 124  SHMKFRADREIHCCCPILSMRDSERLETRMMAMQKYMRGSKDKPLRLLSRYQNILREQAA 183

Query: 1480 RMELLNAGKPE--IAGNNHYCCNTFQTC-NWEPEGENMKVAMGVHSVHDMTLQDMADGLE 1310
            R     AG+    +     +C NTFQ C    PEG  +K A+ VHS++D+ +++ A  L+
Sbjct: 184  RTTAFMAGEVNAGVLDGEVFCENTFQDCVRRVPEG-FLKTAIAVHSIYDIKVEEFASALK 242

Query: 1309 RKNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTTHGYEHDLNDYL 1130
            RK I    GCFLF P +L+GQKEG LP           +I+FFF +D   GY HDL DYL
Sbjct: 243  RKGITQAYGCFLFPPAVLIGQKEGILPSVDGHYLVENGRIKFFFANDPNAGYSHDLKDYL 302

Query: 1129 DYVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVTE--YSLLKTGFLSSDYPVSDSVFK 956
             YV K++V  + G V+ +E+  +RGDT+FFK+ DVT   Y +   G         D  FK
Sbjct: 303  KYVEKTYVDIEDG-VFAIELMQMRGDTMFFKITDVTAAMYHMKYRGM------KRDETFK 355

Query: 955  AMPIGQTDEVIVPLYWIVDGEVVVERKYLPKSLVSRSMEWLMRNKANALQYETLLNYIVS 776
             +P+ +   V+VPL+   +  + +    LP++LV +   ++M+NK   L    L NY+ +
Sbjct: 356  CIPLLKNSSVVVPLFSWDNRSLKITSGLLPRTLVEQGAAFIMKNKEKDLNVAVLKNYLSA 415

Query: 775  TNVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVKGAEEISLKQ 596
             N S  FNG QVR+G+K  P +++KLA+TL +RE+  R+++  I+S    +   + +LK 
Sbjct: 416  VNNSYIFNGSQVRDGVKIAPDLISKLAVTLYLREKVYRQRENSIISYFEQEMLHDPNLKA 475

Query: 595  LVKGVFEKVFGPV-SLKARVLKKLARWCG-VEYGEMKYDIDVLPLYVEIEDCIRLWRKGK 422
            +       V   + S+   + K L  W G   +    +DI    LYVEI D  ++ +KG+
Sbjct: 476  MFGDFLWFVPNTLSSVWKNMRKSLMEWFGYAGFDLTTFDICDPVLYVEIVDRYKIIQKGR 535

Query: 421  LEGIESYDMEEEVKRGLDKKEDIKKLATELKGKI 320
            +   E +D  EE +    ++++   LA ++  K+
Sbjct: 536  MPLGEFFDCHEECENYELREKEKNDLAAKMAQKV 569


>gb|AAV67979.1| alpha protein [Barley stripe mosaic virus]
          Length = 1138

 Score =  323 bits (829), Expect = 3e-92
 Identities = 198/574 (34%), Positives = 314/574 (54%), Gaps = 8/574 (1%)
 Frame = -2

Query: 2017 VNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKELVDVRRVLCSESINA 1838
            ++ E+V+ NL  TAS++  S LHDV+       +  +E     ++ VDVRR + SE +  
Sbjct: 11   ISREEVMGNLISTASSSVRSPLHDVLCSHVRTIVDSVEKKAVSRKHVDVRRNISSEELQM 70

Query: 1837 LSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVWDVGGNWLTNLKYWL 1658
            L + YPE+ V++S  E G+H+MAA  R LET Y+  ++P+K T V+D+GGN       W 
Sbjct: 71   LINAYPEYAVSSSACESGTHSMAACFRFLETEYLLDMVPMKETFVYDIGGN-------WF 123

Query: 1657 TNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVFARNGNIAP-DFFEAYTAVKTYEQQ 1481
            +++K+ +D  +HCCCP+L+ RD+ R + RM AM+ + R     P      Y  +   +  
Sbjct: 124  SHMKFRADREIHCCCPILSMRDSERLETRMMAMQKYMRGSKDKPLRLLSRYQNILREQAA 183

Query: 1480 RMELLNAGKPEIA--GNNHYCCNTFQTC-NWEPEGENMKVAMGVHSVHDMTLQDMADGLE 1310
            R     AG+          +C NTFQ C    PEG  +K A+ VHS++D+ +++ A  L+
Sbjct: 184  RTTAFMAGEVNAGDLDGEVFCENTFQDCVRGVPEG-FLKTAIAVHSIYDIKVEEFASALK 242

Query: 1309 RKNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTTHGYEHDLNDYL 1130
            RK I    GCFLF P +L+GQKEG LP           +I+FFF +D   GY HDL DYL
Sbjct: 243  RKGITQAYGCFLFPPAVLIGQKEGILPSVDGHYLVENGRIKFFFANDPNAGYSHDLKDYL 302

Query: 1129 DYVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVTE--YSLLKTGFLSSDYPVSDSVFK 956
             YV K++V  + G V  +E+  +RGDT+FFK+ DVT   Y +   G         D  FK
Sbjct: 303  KYVEKAYVDIEDG-VSAIELMQMRGDTMFFKITDVTAAMYHMKYRGM------KRDETFK 355

Query: 955  AMPIGQTDEVIVPLYWIVDGEVVVERKYLPKSLVSRSMEWLMRNKANALQYETLLNYIVS 776
             +P+ +   V+VPL+   +  + +    LP++LV +   ++M+NK   L    L NY+ +
Sbjct: 356  CIPLLKNSSVVVPLFSWDNRSLKITSGLLPRTLVEQGAAFIMKNKEKDLNVAVLKNYLSA 415

Query: 775  TNVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVKGAEEISLKQ 596
             N S  FNG QVR+G+K  P +++KLA+TL +RE+  R+++  I+S    +   + +LK 
Sbjct: 416  VNNSYIFNGSQVRDGVKIAPDLISKLAVTLYLREKVYRQRENSIISYFEQEMLHDPNLKA 475

Query: 595  LVKGVFEKVFGPV-SLKARVLKKLARWCG-VEYGEMKYDIDVLPLYVEIEDCIRLWRKGK 422
            +       V   + S+   + K L  W G  ++    +DI    LYVEI D  ++ +KG+
Sbjct: 476  MFGDFLWFVPNTLSSVWKNMRKSLMEWFGYADFDLTTFDICDPVLYVEIVDRYKIIQKGR 535

Query: 421  LEGIESYDMEEEVKRGLDKKEDIKKLATELKGKI 320
            +   E +D  EE +    ++++   LA ++  K+
Sbjct: 536  IPLGEFFDCHEECENYELREKEKNDLALKMAQKV 569


>dbj|BAA94796.1| 152-kDa protein [Japanese soil-borne wheat mosaic virus]
          Length = 1334

 Score =  322 bits (825), Expect = 7e-91
 Identities = 191/562 (33%), Positives = 295/562 (52%), Gaps = 5/562 (0%)
 Frame = -2

Query: 2017 VNDEQVVQNLFMTASTTTNSMLHDVIADRAANHLKILETTQNQKELVDVRRVLCSESINA 1838
            +N+E+VV+    T++T TNS LH  + ++           Q QK+ +DVRR L  E +  
Sbjct: 12   INEEEVVRAAIATSATRTNSELHRTVCEQIREQFLDTVENQKQKKKIDVRRDLTQEQLQT 71

Query: 1837 LSSLYPEFNVTTSNQERGSHTMAAVCRTLETMYIKSLLPVKYTVVWDVGGNWLTNLKYWL 1658
            L+ LYPE ++ TS  ERG+H+ AA  R +ET  + S +P K   V+D+GGNW T+LK   
Sbjct: 72   LNELYPERHIVTSGCERGTHSFAAASRKIETDLLLSRMP-KNANVYDIGGNWATHLKRKD 130

Query: 1657 TNLKYDSDPFVHCCCPLLNYRDAYRKQERMFAMEVF-ARNGNIAPDFFEAYTAVKTYEQQ 1481
            T         VHCCCP+L++RDA RK  R  ++E F +   +I+    +    ++  E +
Sbjct: 131  TRK-------VHCCCPVLDFRDAQRKTTRWLSVEKFLSEKDSISEHCGQKVLEIQEDEDR 183

Query: 1480 RMELLNAGK--PEIAGNNHYCCNTFQTCNWEPEGENMKVAMGVHSVHDMTLQDMADGLER 1307
                L  G   PE      YC N F+ C +  E       M +HS++D++L D+ + +E 
Sbjct: 184  ISNNLRKGAVAPEDLTGRWYCENRFEDCVYRAE---KAYGMAIHSIYDISLDDLVNAMEE 240

Query: 1306 KNIKHFIGCFLFSPKLLLGQKEGDLPXXXXXXXXXXXKIRFFFTDDTTHGYEHDLNDYLD 1127
            K IK+ +G FLFS +L LG+K G+L             +++ F DDT  GY HDL   ++
Sbjct: 241  KRIKYLVGTFLFSVELFLGKKRGELTSVDGFFEIDGGNVKYGFYDDTNCGYRHDLQQLME 300

Query: 1126 YVRKSFVVAKKGHVYMLEIFGVRGDTLFFKLYDVTEYSLLKTGFLSSDYPVSDSVFKAMP 947
            Y+ K+FV AK G V+ LE+   RGD +FF L D TE  +           V D  FK +P
Sbjct: 301  YLTKTFVKAKGGSVFYLELTEQRGDVMFFSLTDATEARMHGV--------VEDESFKCIP 352

Query: 946  IGQTDEVIVPLYWI--VDGEVVVERKYLPKSLVSRSMEWLMRNKANALQYETLLNYIVST 773
            I   D V+ PL+ +     E+      LPKS V R++E+  R K N L  ET+ +Y+ ST
Sbjct: 353  IESKDSVVFPLFELNKKSDELEFTEVLLPKSFVRRTIEYTARLKTNQLNPETVNSYLTST 412

Query: 772  NVSAAFNGCQVREGLKTDPWVLAKLAMTLLVREEFNREKQKKILSVLRVKGAEEISLKQL 593
            N +    G   +   K D  ++ ++  TL+V  E    +QKK+L  LR++  +++    L
Sbjct: 413  NNTVIIGGSAKKTVEKVDAMLIPQITTTLIVWTELMNARQKKVLDRLRIQMKDDVGFMAL 472

Query: 592  VKGVFEKVFGPVSLKARVLKKLARWCGVEYGEMKYDIDVLPLYVEIEDCIRLWRKGKLEG 413
                F K+FG VS   + L+  A W    +G    +   +PLYVE++D +++W++     
Sbjct: 473  AHASFSKMFGKVSFYQKALRSYANWISYCHGTDAIEFKNVPLYVEVKDRVKMWKQHAPNH 532

Query: 412  IESYDMEEEVKRGLDKKEDIKK 347
              S+D+E+     LD+K  + K
Sbjct: 533  GFSFDLED-----LDEKIQLYK 549